FFCP PHASE1:Mm9::chr7:28871489..28871499,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:28871489..28871499,+|id=chr7:28871489..28871499,+|ontology_enrichment_celltype=CL:0000239!1.80e-24!6;CL:0000677!1.80e-24!6;CL:0000212!1.80e-24!6;CL:0000584!1.80e-24!6;CL:0000075!6.49e-21!7;CL:0002563!3.63e-16!9;CL:0002251!3.63e-16!9;CL:0000473!1.36e-13!3;CL:0000627!1.36e-13!3;CL:0000682!1.36e-13!3;CL:0000066!2.66e-12!25;CL:0002076!1.69e-09!15;CL:0000223!5.48e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,1.54e-29,3;CL:0000239,1.13e-15,6;CL:0000677,1.13e-15,6;CL:0000584,1.13e-15,6;CL:0000066,9.61e-15,25;CL:0000075,1.34e-13,7;CL:0000473,2.39e-13,7;CL:0002563,8.07e-11,9;CL:0002251,8.07e-11,9;CL:0002076,6.77e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.84e-31!15;UBERON:0001242!2.14e-24!13;UBERON:0000060!2.14e-24!13;UBERON:0001262!2.14e-24!13;UBERON:0004786!2.14e-24!13;UBERON:0004923!5.36e-19!24;UBERON:0000160!2.46e-16!43;UBERON:0003350!3.63e-16!9;UBERON:0004808!3.63e-16!9;UBERON:0001277!3.63e-16!9;UBERON:0000485!3.87e-13!11;UBERON:0005409!5.37e-13!59;UBERON:0000331!7.43e-13!3;UBERON:0002116!7.43e-13!3;UBERON:0001204!7.43e-13!3;UBERON:0001168!7.43e-13!3;UBERON:0001962!3.24e-09!2;UBERON:0001961!3.24e-09!2;UBERON:0001744!3.24e-09!2;UBERON:0001007!2.94e-07!128;UBERON:0001555!2.94e-07!128;UBERON:0007026!2.94e-07!128;UBERON:0004119!4.26e-07!130;UBERON:0000925!4.26e-07!130;UBERON:0006595!4.26e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.07e-11,9;UBERON:0004808,8.07e-11,9;UBERON:0001277,8.07e-11,9;UBERON:0000485,4.82e-09,11;UBERON:0001242,8.31e-08,13;UBERON:0001262,8.31e-08,13;UBERON:0004786,8.31e-08,13;UBERON:0000344,6.77e-07,15|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,5.37213670118047,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:28871489..28871499,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:28871489..28871499,+ | |||
|description=CAGE_peak_at_chr7:28871489..28871499,+ | |||
|id=chr7:28871489..28871499,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.80e-24!6;CL:0000677!1.80e-24!6;CL:0000212!1.80e-24!6;CL:0000584!1.80e-24!6;CL:0000075!6.49e-21!7;CL:0002563!3.63e-16!9;CL:0002251!3.63e-16!9;CL:0000473!1.36e-13!3;CL:0000627!1.36e-13!3;CL:0000682!1.36e-13!3;CL:0000066!2.66e-12!25;CL:0002076!1.69e-09!15;CL:0000223!5.48e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.54e-29,3;CL:0000239,1.13e-15,6;CL:0000677,1.13e-15,6;CL:0000584,1.13e-15,6;CL:0000066,9.61e-15,25;CL:0000075,1.34e-13,7;CL:0000473,2.39e-13,7;CL:0002563,8.07e-11,9;CL:0002251,8.07e-11,9;CL:0002076,6.77e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.84e-31!15;UBERON:0001242!2.14e-24!13;UBERON:0000060!2.14e-24!13;UBERON:0001262!2.14e-24!13;UBERON:0004786!2.14e-24!13;UBERON:0004923!5.36e-19!24;UBERON:0000160!2.46e-16!43;UBERON:0003350!3.63e-16!9;UBERON:0004808!3.63e-16!9;UBERON:0001277!3.63e-16!9;UBERON:0000485!3.87e-13!11;UBERON:0005409!5.37e-13!59;UBERON:0000331!7.43e-13!3;UBERON:0002116!7.43e-13!3;UBERON:0001204!7.43e-13!3;UBERON:0001168!7.43e-13!3;UBERON:0001962!3.24e-09!2;UBERON:0001961!3.24e-09!2;UBERON:0001744!3.24e-09!2;UBERON:0001007!2.94e-07!128;UBERON:0001555!2.94e-07!128;UBERON:0007026!2.94e-07!128;UBERON:0004119!4.26e-07!130;UBERON:0000925!4.26e-07!130;UBERON:0006595!4.26e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.07e-11,9;UBERON:0004808,8.07e-11,9;UBERON:0001277,8.07e-11,9;UBERON:0000485,4.82e-09,11;UBERON:0001242,8.31e-08,13;UBERON:0001262,8.31e-08,13;UBERON:0004786,8.31e-08,13;UBERON:0000344,6.77e-07,15 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,5.37213670118047,7.94282978024787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:28871489..28871499,+ | |||
}} |
Latest revision as of 22:09, 4 August 2015
Short description: | p@chr7:28871489..28871499, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28871489..28871499, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.54e-29 | 3 |
brush border epithelial cell | 1.13e-15 | 6 |
gut absorptive cell | 1.13e-15 | 6 |
enterocyte | 1.13e-15 | 6 |
epithelial cell | 9.61e-15 | 25 |
columnar/cuboidal epithelial cell | 1.34e-13 | 7 |
defensive cell | 2.39e-13 | 7 |
intestinal epithelial cell | 8.07e-11 | 9 |
epithelial cell of alimentary canal | 8.07e-11 | 9 |
endo-epithelial cell | 6.77e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.07e-11 | 9 |
gastrointestinal system epithelium | 8.07e-11 | 9 |
intestinal epithelium | 8.07e-11 | 9 |
simple columnar epithelium | 4.82e-09 | 11 |
intestinal mucosa | 8.31e-08 | 13 |
wall of intestine | 8.31e-08 | 13 |
gastrointestinal system mucosa | 8.31e-08 | 13 |
mucosa | 6.77e-07 | 15 |