FFCP PHASE1:Mm9::chr17:5799660..5799678,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=78512|HGNC=|MCL_coexpression_id=3108|UniProt=|association_with_transcript=170bp_to_NR_045079,NR_045080,uc008afh.1,uc008afi.1_5end|description=CAGE_peak_4_at_3300005D01Rik_5end|id=chr17:5799660..5799678,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,3.20e-15,3;CL:0000737,3.20e-15,3;CL:0000746,3.20e-15,3;CL:0000513,3.20e-15,3;CL:0000680,7.10e-08,6;CL:0000187,7.10e-08,6;CL:0000056,7.10e-08,6;CL:0000682,1.65e-07,3;CL:0000222,8.14e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.29e-07!59;UBERON:0000014!2.91e-07!5;UBERON:0001003!2.91e-07!5;UBERON:0002097!2.91e-07!5;UBERON:0002199!2.91e-07!5;UBERON:0007029!2.91e-07!5;UBERON:0007376!2.91e-07!5;UBERON:0002416!2.91e-07!5;UBERON:0007383!2.91e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001962,5.51e-11,2;UBERON:0001961,5.51e-11,2;UBERON:0001744,5.51e-11,2;UBERON:0002465,1.32e-07,3|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,3.44113921600755,1.72269589234506,0,1.939241094173,0.950117097281869,0.504060259519861,5.09980174507201,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,3.8588915405392,1.14613375975503,1.54701627683233,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.164698954724011,6.28338022000674,6.96347652144028,3.8992817423824,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.819674726883377,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0.8244312647074,1.61464426695906,0.422190474497091,0.835606408021955,0.492422699235184,4.08073171281791,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,1.07891477107857,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0|short_description=p4@3300005D01Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78512 | |||
|HGNC= | |||
|MCL_coexpression_id=3108 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=170bp_to_NR_045079,NR_045080,uc008afh.1,uc008afi.1_5end | |||
|cluster_id=chr17:5799660..5799678,+ | |||
|description=CAGE_peak_4_at_3300005D01Rik_5end | |||
|id=chr17:5799660..5799678,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.20e-15,3;CL:0000737,3.20e-15,3;CL:0000746,3.20e-15,3;CL:0000513,3.20e-15,3;CL:0000680,7.10e-08,6;CL:0000187,7.10e-08,6;CL:0000056,7.10e-08,6;CL:0000682,1.65e-07,3;CL:0000222,8.14e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.29e-07!59;UBERON:0000014!2.91e-07!5;UBERON:0001003!2.91e-07!5;UBERON:0002097!2.91e-07!5;UBERON:0002199!2.91e-07!5;UBERON:0007029!2.91e-07!5;UBERON:0007376!2.91e-07!5;UBERON:0002416!2.91e-07!5;UBERON:0007383!2.91e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,5.51e-11,2;UBERON:0001961,5.51e-11,2;UBERON:0001744,5.51e-11,2;UBERON:0002465,1.32e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,3.44113921600755,1.72269589234506,0,1.939241094173,0.950117097281869,0.504060259519861,5.09980174507201,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0,0,3.8588915405392,1.14613375975503,1.54701627683233,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.164698954724011,6.28338022000674,6.96347652144028,3.8992817423824,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.819674726883377,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0.8244312647074,1.61464426695906,0.422190474497091,0.835606408021955,0.492422699235184,4.08073171281791,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,1.07891477107857,0.247960367176008,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@3300005D01Rik | |||
}} |
Revision as of 05:05, 5 August 2015
Short description: | p4@3300005D01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_3300005D01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3108 |
Association with transcript: | 170bp_to_NR_045079, NR_045080, uc008afh.1, uc008afi.1_5end |
EntrezGene: | 78512 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.20e-15 | 3 |
striated muscle cell | 3.20e-15 | 3 |
cardiac muscle cell | 3.20e-15 | 3 |
cardiac muscle myoblast | 3.20e-15 | 3 |
muscle precursor cell | 7.10e-08 | 6 |
muscle cell | 7.10e-08 | 6 |
myoblast | 7.10e-08 | 6 |
M cell of gut | 1.65e-07 | 3 |
mesodermal cell | 8.14e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 5.51e-11 | 2 |
mucosa-associated lymphoid tissue | 5.51e-11 | 2 |
lymphoid tissue | 5.51e-11 | 2 |
lymphoid system | 1.32e-07 | 3 |