FFCP PHASE1:Mm9::chr9:66883792..66883812,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1485|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:66883792..66883812,+|id=chr9:66883792..66883812,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.75e-09,3;CL:0002202,3.75e-09,3;CL:0000069,3.75e-09,3;CL:0002632,3.75e-09,3;CL:0002368,3.75e-09,3;CL:0000307,3.75e-09,3;CL:0000377,3.75e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.32e-10!18;UBERON:0000948!6.32e-10!18;UBERON:0005498!6.32e-10!18;UBERON:0004140!6.32e-10!18;UBERON:0009881!6.32e-10!18;UBERON:0004141!6.32e-10!18;UBERON:0003084!6.32e-10!18;UBERON:0007005!6.32e-10!18;UBERON:0004139!6.32e-10!18;UBERON:0004291!6.32e-10!18;UBERON:0004535!7.55e-09!23;UBERON:0001009!7.55e-09!23;UBERON:0004872!6.13e-08!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.12e-22,18;UBERON:0000948,1.12e-22,18;UBERON:0005498,1.12e-22,18;UBERON:0004140,1.12e-22,18;UBERON:0009881,1.12e-22,18;UBERON:0004141,1.12e-22,18;UBERON:0003084,1.12e-22,18;UBERON:0007005,1.12e-22,18;UBERON:0004139,1.12e-22,18;UBERON:0004291,1.12e-22,18;UBERON:0004535,4.14e-20,23;UBERON:0001009,4.14e-20,23;UBERON:0003103,1.96e-14,43;UBERON:0004872,4.65e-13,33;UBERON:0003914,1.32e-09,47;UBERON:0003126,3.75e-09,3;UBERON:0001005,3.75e-09,3;UBERON:0007196,3.75e-09,3;UBERON:0001558,3.75e-09,3|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,1.37645568640302,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,0,0.65407546914134,0,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.681535739998656,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,2.38140145112336,3.04031838570118,3.0331466700887,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,1.94120219936891,0.883366073841574,0.484875253135222,0,0,0,0.766371165625774,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0,0,0,0.204109497453984,0,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0,0.473489471170421,0.983821158737019,2.31400669331067,1.16266972375204,1.60964040839772,1.86824547787471,3.62031669809657,4.43252153013557,6.16122952548504,10.6725990820493,4.17145219052996,5.36825675041487,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0,1.51296634912286,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.797273843287435,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,8.07906967053994,0,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0.477489376012546,0.492422699235184,0.874442509889552,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,2.0663363931334,0.523511883968059,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.503653849092235,1.35232715822533,1.87682475451182,0.915758121336325,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.0941093804153306,0.423073039458382,1.09756783723664,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p@chr9:66883792..66883812,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1485 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:66883792..66883812,+ | |||
|description=CAGE_peak_at_chr9:66883792..66883812,+ | |||
|id=chr9:66883792..66883812,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.75e-09,3;CL:0002202,3.75e-09,3;CL:0000069,3.75e-09,3;CL:0002632,3.75e-09,3;CL:0002368,3.75e-09,3;CL:0000307,3.75e-09,3;CL:0000377,3.75e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.32e-10!18;UBERON:0000948!6.32e-10!18;UBERON:0005498!6.32e-10!18;UBERON:0004140!6.32e-10!18;UBERON:0009881!6.32e-10!18;UBERON:0004141!6.32e-10!18;UBERON:0003084!6.32e-10!18;UBERON:0007005!6.32e-10!18;UBERON:0004139!6.32e-10!18;UBERON:0004291!6.32e-10!18;UBERON:0004535!7.55e-09!23;UBERON:0001009!7.55e-09!23;UBERON:0004872!6.13e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.12e-22,18;UBERON:0000948,1.12e-22,18;UBERON:0005498,1.12e-22,18;UBERON:0004140,1.12e-22,18;UBERON:0009881,1.12e-22,18;UBERON:0004141,1.12e-22,18;UBERON:0003084,1.12e-22,18;UBERON:0007005,1.12e-22,18;UBERON:0004139,1.12e-22,18;UBERON:0004291,1.12e-22,18;UBERON:0004535,4.14e-20,23;UBERON:0001009,4.14e-20,23;UBERON:0003103,1.96e-14,43;UBERON:0004872,4.65e-13,33;UBERON:0003914,1.32e-09,47;UBERON:0003126,3.75e-09,3;UBERON:0001005,3.75e-09,3;UBERON:0007196,3.75e-09,3;UBERON:0001558,3.75e-09,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,1.37645568640302,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,0,0.65407546914134,0,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.681535739998656,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,2.38140145112336,3.04031838570118,3.0331466700887,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,1.94120219936891,0.883366073841574,0.484875253135222,0,0,0,0.766371165625774,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0,0,0,0.204109497453984,0,0.562210347358373,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0,0.473489471170421,0.983821158737019,2.31400669331067,1.16266972375204,1.60964040839772,1.86824547787471,3.62031669809657,4.43252153013557,6.16122952548504,10.6725990820493,4.17145219052996,5.36825675041487,0,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0.474529061544512,1.64698954724011,1.50801125280162,0.795825888164603,1.16978452271472,0,1.51296634912286,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.797273843287435,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,8.07906967053994,0,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0,1.16902343164525,0.395287777946524,0,0.141940085208269,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0.161464426695906,0.180938774784468,0.477489376012546,0.492422699235184,0.874442509889552,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,2.0663363931334,0.523511883968059,0.648074866458964,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.503653849092235,1.35232715822533,1.87682475451182,0.915758121336325,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.0941093804153306,0.423073039458382,1.09756783723664,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr9:66883792..66883812,+ | |||
}} |
Latest revision as of 12:54, 5 August 2015
Short description: | p@chr9:66883792..66883812, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:66883792..66883812, + |
Coexpression cluster: | MCL_coexpression_mm9:1485 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.75e-09 | 3 |
epithelial cell of tracheobronchial tree | 3.75e-09 | 3 |
branched duct epithelial cell | 3.75e-09 | 3 |
epithelial cell of lower respiratory tract | 3.75e-09 | 3 |
respiratory epithelial cell | 3.75e-09 | 3 |
tracheal epithelial cell | 3.75e-09 | 3 |
tracheoblast | 3.75e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.12e-22 | 18 |
heart | 1.12e-22 | 18 |
primitive heart tube | 1.12e-22 | 18 |
primary heart field | 1.12e-22 | 18 |
anterior lateral plate mesoderm | 1.12e-22 | 18 |
heart tube | 1.12e-22 | 18 |
heart primordium | 1.12e-22 | 18 |
cardiac mesoderm | 1.12e-22 | 18 |
cardiogenic plate | 1.12e-22 | 18 |
heart rudiment | 1.12e-22 | 18 |
cardiovascular system | 4.14e-20 | 23 |
circulatory system | 4.14e-20 | 23 |
compound organ | 1.96e-14 | 43 |
splanchnic layer of lateral plate mesoderm | 4.65e-13 | 33 |
epithelial tube | 1.32e-09 | 47 |
trachea | 3.75e-09 | 3 |
respiratory airway | 3.75e-09 | 3 |
tracheobronchial tree | 3.75e-09 | 3 |
lower respiratory tract | 3.75e-09 | 3 |