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FFCP PHASE1:Mm9::chr13:108948778..108948824,-: Difference between revisions

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{{FFCP|EntrezGene=75597|HGNC=|MCL_coexpression_id=2813|UniProt=Q59J78|association_with_transcript=0bp_to_ENSMUST00000022206,ENSMUST00000163558,NM_001127346,uc007ruu.2,uc007ruv.2,uc011zek.1_5end|description=CAGE_peak_1_at_Ndufaf2_5end|id=chr13:108948778..108948824,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!7.65e-11!114;UBERON:0004111!6.14e-09!122;UBERON:0002020!1.33e-08!34;UBERON:0001049!6.85e-08!52;UBERON:0005068!6.85e-08!52;UBERON:0006241!6.85e-08!52;UBERON:0007135!6.85e-08!52;UBERON:0002346!1.33e-07!71;UBERON:0003075!1.33e-07!71;UBERON:0007284!1.33e-07!71;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29;UBERON:0003103!5.11e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.65e-11,114;UBERON:0010314,1.39e-10,92;UBERON:0004111,6.14e-09,122;UBERON:0002020,1.33e-08,34;UBERON:0001049,6.85e-08,52;UBERON:0005068,6.85e-08,52;UBERON:0006241,6.85e-08,52;UBERON:0007135,6.85e-08,52;UBERON:0000073,1.09e-07,54;UBERON:0003528,3.67e-07,29;UBERON:0002791,3.67e-07,29;UBERON:0001893,3.67e-07,29;UBERON:0003103,5.11e-07,43;UBERON:0002346,8.64e-07,64;UBERON:0003075,8.64e-07,64;UBERON:0007284,8.64e-07,64|phase1_expression=24.0223270657191,19.1936474201649,16.8349718574128,14.215817931421,13.5241847085514,29.5467518564926,22.1932008565749,11.6210991097419,22.9485617107217,14.0438715793196,36.1269912955816,27.9202556483677,8.21763503669787,11.2772319120507,40.9725007033265,30.1688148410841,16.7894850750755,14.5112596064789,12.614527891728,11.4585205985468,56.1285714997061,20.2553540449806,33.9559725880616,25.1188103785648,17.4351053611049,21.8208146363708,22.3996238002719,21.9780657339607,18.4322716872683,19.6583501212746,34.8116901728828,5.08024538767705,6.1506478758457,0,38.7061170466708,44.218415665359,47.1631212966073,3.76678467663217,5.4693474116666,6.80580867165938,1.76469446409304,4.09827290975067,3.39857247121808,45.9523385610857,41.2604110063424,41.8486594928634,18.7773922643529,22.6746162635664,18.6733255324301,27.2201858703997,20.0180582924268,20.125359011096,13.7581736967344,8.70434570413613,14.1159395639835,36.2735804810685,14.6132054368766,30.9403255366465,43.4980390848135,33.8554226734101,43.1005354384202,20.3306719241479,19.5644855144451,9.44894703145469,8.89979726310277,13.4991221839759,16.4780060785123,19.5951335713993,41.4758449233911,41.9868468211558,55.7361147581162,51.9884791614923,90.7769703311132,51.2011540718508,45.6224442046805,61.5876587028714,35.2370819198044,42.7752582585379,51.1509755743291,43.3905886632338,42.8162172059277,65.6350846901518,64.2120897703176,34.3285192119325,34.5324039975591,51.2653738724182,45.5589378557129,43.9902692147709,24.2323818666189,28.5660497203649,19.1310562543107,33.5565312022741,23.1190253460635,45.3350680975766,92.9180276950167,92.7415656291485,34.1279940920157,49.7656541927929,63.3877851231,66.0745004334336,23.5208511027056,39.7812079984385,76.4415719119937,28.4426681261332,39.6178605050522,41.2976580724411,59.1463600667296,37.7948641870088,20.4560928081266,28.2040064223167,59.8524377343169,60.5886301841161,48.1986389265162,51.8485883501022,30.5730638552832,41.2186419561336,9.39340877390621,52.6341659188478,26.5383165584962,36.0740075382722,23.6300424752621,29.0925151881133,35.4144346314432,45.9665851308129,28.2753054198164,27.8448190177365,30.1934113754919,34.1944556666242,34.1818910826544,67.2559970927654,49.4100651044117,46.9947276902113,51.4519987769138,42.7044813741652,57.7650763875577,48.0234138680563,27.2929495118848,25.1302080632388,26.2831668771022,28.6200924005605,53.2192611717458,36.7843367093557,39.2535442975661,40.0874815443002,23.5406287063594,34.2063633160549,32.0459897994273,25.6116337031625,50.8740463321508,49.9240051643043,44.3396832893151,47.3462782043562,51.7167883559612,32.3874514865615,30.0441919155597,46.5740184355274,53.3682022358058,49.4107981660253,29.8371674365372,52.1956946789465,60.5077234751228,58.3401079133688,38.8261366359745,49.191057936851,57.3873659941047,52.3201375688418,52.849860075725,47.0564329739693,70.9252953127101,61.8911339578189,52.3704509666228,53.5091953976716,60.3762817050389,55.4272509480335,46.4740786326721,53.3045892124693,16.1905203662061,25.3872543997003,59.294133648795,50.6275944655756,38.2736360126617,30.2525286935014,35.3581089713344,27.7729414124336,33.2170343081158,20.5873693405014,21.8661631656234,21.4872989804443,32.1690743746548,32.357498711552,42.1469197255654,32.4600275404619,46.2789678325519,57.2385048174741,45.0830942692322,48.2653646993395,46.7425494073978,34.7172308457077,42.8743721702464,52.8444329766976,54.3215598331157,49.1120712408766,46.8395150797695,44.7144883319132,35.7737371106029,39.1260075549646,33.6747801504915,27.0118418922707,28.0088436959562,38.2635862809578,39.8852657866587,51.0684228529832,54.6319184803947,45.0290546678889,59.9112332379956,55.0621953924704,61.7127102515378,41.0076993158862,21.4313700593261,46.42539588376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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75597
|HGNC=
|MCL_coexpression_id=2813
|TSSclassifier=NA
|UniProt=uniprot:Q59J78
|association_with_transcript=0bp_to_ENSMUST00000022206,ENSMUST00000163558,NM_001127346,uc007ruu.2,uc007ruv.2,uc011zek.1_5end
|cluster_id=chr13:108948778..108948824,-
|description=CAGE_peak_1_at_Ndufaf2_5end
|id=chr13:108948778..108948824,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|phase1_expression=24.0223270657191,19.1936474201649,16.8349718574128,14.215817931421,13.5241847085514,29.5467518564926,22.1932008565749,11.6210991097419,22.9485617107217,14.0438715793196,36.1269912955816,27.9202556483677,8.21763503669787,11.2772319120507,40.9725007033265,30.1688148410841,16.7894850750755,14.5112596064789,12.614527891728,11.4585205985468,56.1285714997061,20.2553540449806,33.9559725880616,25.1188103785648,17.4351053611049,21.8208146363708,22.3996238002719,21.9780657339607,18.4322716872683,19.6583501212746,34.8116901728828,5.08024538767705,6.1506478758457,0,38.7061170466708,44.218415665359,47.1631212966073,3.76678467663217,5.4693474116666,6.80580867165938,1.76469446409304,4.09827290975067,3.39857247121808,45.9523385610857,41.2604110063424,41.8486594928634,18.7773922643529,22.6746162635664,18.6733255324301,27.2201858703997,20.0180582924268,20.125359011096,13.7581736967344,8.70434570413613,14.1159395639835,36.2735804810685,14.6132054368766,30.9403255366465,43.4980390848135,33.8554226734101,43.1005354384202,20.3306719241479,19.5644855144451,9.44894703145469,8.89979726310277,13.4991221839759,16.4780060785123,19.5951335713993,41.4758449233911,41.9868468211558,55.7361147581162,51.9884791614923,90.7769703311132,51.2011540718508,45.6224442046805,61.5876587028714,35.2370819198044,42.7752582585379,51.1509755743291,43.3905886632338,42.8162172059277,65.6350846901518,64.2120897703176,34.3285192119325,34.5324039975591,51.2653738724182,45.5589378557129,43.9902692147709,24.2323818666189,28.5660497203649,19.1310562543107,33.5565312022741,23.1190253460635,45.3350680975766,92.9180276950167,92.7415656291485,34.1279940920157,49.7656541927929,63.3877851231,66.0745004334336,23.5208511027056,39.7812079984385,76.4415719119937,28.4426681261332,39.6178605050522,41.2976580724411,59.1463600667296,37.7948641870088,20.4560928081266,28.2040064223167,59.8524377343169,60.5886301841161,48.1986389265162,51.8485883501022,30.5730638552832,41.2186419561336,9.39340877390621,52.6341659188478,26.5383165584962,36.0740075382722,23.6300424752621,29.0925151881133,35.4144346314432,45.9665851308129,28.2753054198164,27.8448190177365,30.1934113754919,34.1944556666242,34.1818910826544,67.2559970927654,49.4100651044117,46.9947276902113,51.4519987769138,42.7044813741652,57.7650763875577,48.0234138680563,27.2929495118848,25.1302080632388,26.2831668771022,28.6200924005605,53.2192611717458,36.7843367093557,39.2535442975661,40.0874815443002,23.5406287063594,34.2063633160549,32.0459897994273,25.6116337031625,50.8740463321508,49.9240051643043,44.3396832893151,47.3462782043562,51.7167883559612,32.3874514865615,30.0441919155597,46.5740184355274,53.3682022358058,49.4107981660253,29.8371674365372,52.1956946789465,60.5077234751228,58.3401079133688,38.8261366359745,49.191057936851,57.3873659941047,52.3201375688418,52.849860075725,47.0564329739693,70.9252953127101,61.8911339578189,52.3704509666228,53.5091953976716,60.3762817050389,55.4272509480335,46.4740786326721,53.3045892124693,16.1905203662061,25.3872543997003,59.294133648795,50.6275944655756,38.2736360126617,30.2525286935014,35.3581089713344,27.7729414124336,33.2170343081158,20.5873693405014,21.8661631656234,21.4872989804443,32.1690743746548,32.357498711552,42.1469197255654,32.4600275404619,46.2789678325519,57.2385048174741,45.0830942692322,48.2653646993395,46.7425494073978,34.7172308457077,42.8743721702464,52.8444329766976,54.3215598331157,49.1120712408766,46.8395150797695,44.7144883319132,35.7737371106029,39.1260075549646,33.6747801504915,27.0118418922707,28.0088436959562,38.2635862809578,39.8852657866587,51.0684228529832,54.6319184803947,45.0290546678889,59.9112332379956,55.0621953924704,61.7127102515378,41.0076993158862,21.4313700593261,46.4253958837688,50.0302477677019,61.1082308790677,58.6725620721255,28.9785825374341,29.5174114698657,20.0987657293533,32.6304748299815,31.0050565508285,26.9478559031153,27.8567635016755,22.4490476425664,19.5276229085041,24.1266054302836,23.9318500880232,50.1599558479417,31.4567890787395,79.472542043957,93.4177142139859,29.3443552224249,30.8014531189335,35.3369205746207,42.167384384037,34.4677436372478,32.7387253194996,34.7565931568535,31.9876479791381,39.6714487641396,40.9158201075837,35.9711877931336,29.2402397943844,29.3815976381116,27.6001685684246,27.3650091714008,24.4155781999352,23.8941249011933,51.4694948648561,33.5579148230874,54.1296578899428,29.2348873951965,31.9732553861685,26.3596859031586,36.3533729477506,32.7977588113944,32.8678228253249,31.6255825724996,41.2542172992747,31.3204437293485,47.8962510123285,37.7727356645643,37.5089811305287,31.3892213546824,32.1063871683727,28.631529584769,11.8741330154694,26.752574719263,13.7690846061483,31.5355609218596,33.1421368412375,23.896735150994,31.7849114371381,19.8158091045207,22.6514441648185,34.6862195589522,102.540192011812,20.846247457338,42.5156948004238,46.4838263697976,34.0946907178491,26.1085974947158,24.0217081866849,27.7064840889984,27.7103875600843,19.900796227837,45.8241896647254,50.4555909761911,35.7842262143254,41.3660455347499,41.6085709068793,36.6849107093578,29.6701562046606,31.9042339099797,26.175594198403,32.7925882428236,31.0669656543463,335.960991455777,56.666770950668,48.1484207230154,51.5295649111726,56.0553633893353,58.4588194198092,39.9014611395563,40.2331549167806,44.5652213809271,119.342555688047,202.485094399279,21.8047673233443,38.9232413357115,41.7006486089199,44.3030006354281,30.6135649591393,26.225938831127,25.4814352982334,23.3349452935832,33.0160291330443,26.7485891359049,22.786717840926,23.1949756160611,23.956748568442,15.0771203814224,27.2076460338254,65.9298281520972,99.582380836518,62.4530772874372,30.1375766690217,32.2813857776033,25.6412273974171,28.5109944175158,32.1006146582633,50.2629139929189,50.6357760157895,56.7166558305003,64.1012370141955,58.2320141805046,51.3667850224996,51.3017100176172,52.2372595740096,62.9867948488044,61.0957167867148,62.4799832456744,53.8683579091392,40.2931309579757,42.7867822040198,38.7784350861767,35.4817971308527,36.4484633594649,37.7044154747176,30.4873249112224,33.6087291645851,34.2197054851824,37.7252682772152,44.573357555664,34.3815068414148,34.1166685596343,36.1983205375136,32.3317269386147,37.8102072108862,35.4393874690844,33.4141548705082,43.8872643053332,43.8365241213564,48.4025465593062,40.260957407155,35.6674551774103,35.9612083539625,34.3904589000812,37.3558990241737,45.3585740245178,26.3736867679137,31.6755498391545,34.2795598666961,43.7877216191568,31.916989284309,30.8650577569826,19.4852250791598,28.7735878387852,23.4209448912645,30.7974214630838,22.9415075884296,32.6933648224794
|short_description=p1@Ndufaf2
}}

Revision as of 14:07, 5 August 2015

Short description:p1@Ndufaf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ndufaf2_5end
Coexpression cluster:MCL_coexpression_mm9:2813
Association with transcript: 0bp_to_ENSMUST00000022206, ENSMUST00000163558, NM_001127346, uc007ruu.2, uc007ruv.2, uc011zek.1_5end
EntrezGene:75597
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ndufaf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F127.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A140.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.17
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A356.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.44
GP2+ M cell, pool1.CNhs13228.11845-124H921.82
GP2+ M cell, pool2.CNhs13231.11846-124I122.40
GP2+ M cell, pool3.CNhs13240.11847-124I221.98
Ileum epithelium, pool1.CNhs13199.10252-104B918.43
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C834.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F538.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F644.22
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F747.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D845.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D941.26
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B341.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.67
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C136.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.94
Mouse Granule cells, donor1.CNhs12131.11713-123C343.50
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C620.33
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F541.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D955.74
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D590.78
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D251.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D661.59
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D335.24
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.78
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D443.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E464.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D651.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E143.99
Mouse Schwann, donor1.CNhs12507.11728-123D924.23
Mouse Schwann, donor2.CNhs12573.11746-123F928.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F733.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C845.34
Mouse hepatocyte, donor6.CNhs13090.11822-124F492.92
Mouse hepatocyte, donor8.CNhs13091.11824-124F692.74
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I749.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E363.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I866.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I876.44
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G359.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B637.79
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D728.20
adrenal gland, embryo E14.CNhs11038.406-44C559.85
adrenal gland, embryo E16.CNhs11004.1254-43D660.59
adrenal gland, embryo E17.CNhs11043.1263-45I148.20
adrenal gland, embryo E18.CNhs11026.1262-18F551.85
adrenal gland, neonate N00.CNhs11191.1311-23C130.57
adrenal gland, neonate N25.CNhs11223.1377-27I341.22
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H152.63
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F536.07
bone (os femoris), neonate N16.CNhs11225.1525-43A623.63
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B245.97
cerebellum, neonate N30.CNhs11135.1395-42I228.28
colon, adult.CNhs10468.36-18H727.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C730.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D434.18
corpora quadrigemina, adult.CNhs10501.16-22A467.26
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F146.99
cortex, adult.CNhs10473.12-14D551.45
cortex, neonate N30.CNhs11107.1392-42F242.70
diencephalon, adult.CNhs10482.20-12F257.77
diencephalon, neonate N30.CNhs11201.1388-42B248.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.13
epididymis, adult.CNhs10490.58-23B226.28
eyeball, adult.CNhs10484.31-12G428.62
eyeball, embryo E12.CNhs11016.345-16C653.22
eyeball, embryo E14.CNhs10521.399-16E236.78
eyeball, embryo E15.CNhs10593.426-16C939.25
eyeball, embryo E17.CNhs11023.1261-18D440.09
eyeball, neonate N00.CNhs11207.633-15C623.54
eyeball, neonate N01.CNhs11140.1532-43E734.21
eyeball, neonate N02.CNhs11205.1551-44G832.05
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E250.87
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E244.34
forelimb, embryo E14.CNhs10577.413-26A847.35
forelimb, embryo E15.CNhs11007.437-20E751.72
forelimb, embryo E17.CNhs10598.1517-43C432.39
forelimb, embryo E18.CNhs11008.1520-43B530.04
gonad, embryo E13.CNhs11044.1564-45I646.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C853.37
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D249.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D529.84
heart, embryo E11.CNhs10586.331-24E952.20
heart, embryo E12.CNhs11015.353-12F560.51
heart, embryo E13.CNhs11013.376-3I958.34
heart, embryo E14.CNhs10597.403-26D438.83
heart, embryo E15.CNhs11017.431-16C849.19
heart, embryo E16.CNhs11021.457-17C657.39
heart, embryo E17.CNhs11025.479-18E552.32
heart, embryo E18.CNhs11030.1283-20G352.85
heart, neonate N00.CNhs11213.639-21E347.06
heart, neonate N03.CNhs11221.1349-25I270.93
heart, neonate N10.CNhs11118.749-24G161.89
heart, neonate N16.CNhs11209.782-15G152.37
heart, neonate N20.CNhs11127.821-26I653.51
heart, neonate N25.CNhs11196.1351-25D360.38
heart, neonate N30.CNhs11202.1390-42D255.43
hippocampus, adult.CNhs10478.13-16E846.47
hippocampus, neonate N00.CNhs11228.627-43G153.30
intestinal mucosa, adult.CNhs10506.860-29I316.19
intestine, adult.CNhs10496.178-9A325.39
intestine, embryo E12.CNhs11019.1251-16I559.29
intestine, embryo E13.CNhs11010.381-16D550.63
intestine, embryo E15.CNhs10602.976-16D838.27
intestine, embryo E16.CNhs10585.463-22H430.25
intestine, embryo E17.CNhs10582.482-18D335.36
intestine, embryo E18.CNhs10526.1289-20F727.77
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E920.59
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F221.49
intestine, neonate N10.CNhs11098.755-23A532.17
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E342.15
intestine, neonate N30.CNhs11131.1384-42G132.46
kidney, embryo E14.CNhs10606.411-4I946.28
kidney, embryo E15.CNhs10997.434-16F857.24
kidney, embryo E16.CNhs10584.464-22A545.08
kidney, embryo E17.CNhs11028.483-18I248.27
kidney, embryo E18.CNhs11001.1288-20C746.74
kidney, neonate N00.CNhs11214.646-21G734.72
kidney, neonate N10.CNhs11206.758-6D542.87
kidney, neonate N20.CNhs11113.832-19I152.84
kidney, neonate N25.CNhs11122.1353-25F354.32
kidney, neonate N30.CNhs11203.1385-42H149.11
liver, adult pregnant day01.CNhs10466.508-5B246.84
liver, embryo E12.CNhs10601.355-15F844.71
liver, embryo E13.CNhs10524.378-3H635.77
liver, embryo E14.CNhs10594.409-16E139.13
liver, embryo E15.CNhs10520.433-16D733.67
liver, embryo E16.CNhs10523.462-17F527.01
liver, embryo E17.CNhs10510.481-18A328.01
liver, embryo E18.CNhs10579.499-43G438.26
liver, neonate N00.CNhs11117.641-24F439.89
liver, neonate N03.CNhs11123.1345-25G251.07
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H245.03
liver, neonate N10.CNhs11115.751-24B959.91
liver, neonate N20.CNhs11220.823-25A355.06
liver, neonate N25.CNhs11198.1368-26H161.71
liver, neonate N30.CNhs11106.1382-42D141.01
lung, adult.CNhs10474.28-22B121.43
lung, embryo E12.CNhs10522.354-16G246.43
lung, embryo E14.CNhs10604.404-26F850.03
lung, embryo E15.CNhs11020.432-17C561.11
lung, embryo E16.CNhs10998.458-17B658.67
lung, embryo E17.CNhs10605.480-44A628.98
lung, embryo E18.CNhs10583.1287-20I629.52
lung, neonate N00.CNhs11224.640-42C620.10
lung, neonate N06.CNhs11212.683-20E532.63
lung, neonate N07.CNhs11111.715-19A331.01
lung, neonate N10.CNhs11219.750-23E626.95
lung, neonate N20.CNhs11109.822-18A427.86
lung, neonate N25.CNhs11119.1359-25C722.45
lung, neonate N30.CNhs11133.1394-42H219.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B650.16
mammary gland, adult pregnant day19.CNhs10476.588-5H231.46
medulla oblongata, adult.CNhs10477.17-12C279.47
medulla oblongata, neonate N30.CNhs11200.1396-42A393.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C729.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E334.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.76
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D931.99
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D439.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D635.97
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I729.38
ovary, embryo E18.CNhs11040.505-44H727.60
ovary, neonate N00.CNhs11217.1299-22I427.37
oviduct, adult pregnant day01.CNhs10500.988-6G624.42
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F451.47
pancreas, embryo E15.CNhs11042.1556-45F233.56
pancreas, embryo E16.CNhs11003.460-26E554.13
pancreas, embryo E17.CNhs10599.1558-45G329.23
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G926.36
pancreas, neonate N01.CNhs11138.1531-43D736.35
pancreas, neonate N02.CNhs11139.1539-43D832.80
pancreas, neonate N16.CNhs11136.787-43B632.87
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H541.25
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E647.90
pituitary gland, embryo E13.CNhs11009.370-44C737.77
pituitary gland, embryo E14.CNhs11037.398-44A537.51
pituitary gland, embryo E15.CNhs10592.427-16B931.39
pituitary gland, embryo E16.CNhs11036.449-43F632.11
pituitary gland, embryo E17.CNhs11039.1265-44F528.63
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I726.75
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F831.54
skin, adult.CNhs10492.30-1C333.14
skin, neonate N00.CNhs11124.650-25G423.90
skin, neonate N03.CNhs11215.662-22H331.78
skin, neonate N06.CNhs11097.693-20I519.82
skin, neonate N10.CNhs11108.762-6C422.65
small intestine, neonate N16.CNhs11114.790-21I134.69
spinal cord, adult.CNhs10505.24-13C9102.54
spleen, adult.CNhs10465.25-2G220.85
spleen, embryo E16.CNhs11035.461-43C142.52
spleen, embryo E18.CNhs11011.1271-21F246.48
spleen, neonate N10.CNhs11116.752-24D134.09
spleen, neonate N20.CNhs11112.824-19H126.11
spleen, neonate N25.CNhs11099.1354-25G324.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.90
stomach, adult.CNhs10503.33-1H645.82
stomach, embryo E12.CNhs10588.356-43E350.46
stomach, embryo E15.CNhs10603.1252-16G835.78
stomach, embryo E16.CNhs11022.459-17D441.37
stomach, embryo E17.CNhs11006.1035-18D541.61
stomach, embryo E18.CNhs10999.1286-20C636.68
stomach, neonate N03.CNhs11193.1340-24B829.67
stomach, neonate N07.CNhs11210.718-18A931.90
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I132.79
submandibular gland, adult.CNhs10469.59-29C131.07
testis, adult.CNhs10504.57-7G5335.96
testis, embryo E13.CNhs11031.389-23F556.67
testis, embryo E15.CNhs11034.443-27C548.15
testis, embryo E16.CNhs11033.470-26G551.53
testis, embryo E17.CNhs11029.486-18I556.06
testis, embryo E18.CNhs11027.503-18G558.46
testis, neonate N00.CNhs11189.1300-22B739.90
testis, neonate N07.CNhs11222.726-26I440.23
testis, neonate N10.CNhs11204.763-44D944.57
testis, neonate N20.CNhs11110.839-18H3119.34
testis, neonate N30.CNhs11130.1391-42E2202.49
thymus, adult.CNhs10471.38-12B521.80
thymus, embryo E14.CNhs11041.402-44I438.92
thymus, embryo E15.CNhs11005.430-45I241.70
thymus, embryo E16.CNhs11002.456-26C544.30
thymus, embryo E17.CNhs10581.478-18C130.61
thymus, embryo E18.CNhs10595.1273-19G426.23
thymus, neonate N02.CNhs11181.1541-43F825.48
thymus, neonate N03.CNhs11137.2104-43C723.33
thymus, neonate N06.CNhs11197.681-26C433.02
thymus, neonate N07.CNhs11211.713-19D326.75
thymus, neonate N10.CNhs11194.748-24E422.79
thymus, neonate N20.CNhs11186.820-7A223.19
thymus, neonate N25.CNhs11125.1362-25G723.96
thymus, neonate N30.CNhs11132.1393-42G215.08
tongue, adult.CNhs10499.32-1B427.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H365.93
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F799.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G562.45
urinary bladder, adult.CNhs10481.879-12E430.14
uterus, adult pregnant day19.CNhs10497.590-15F532.28
uterus, adult.CNhs10509.92-27E525.64
vagina, adult.CNhs10502.89-27D528.51
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D764.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A458.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A551.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A961.10
whole body, embryo E11.CNhs11014.324-5I862.48
whole body, embryo E12.CNhs10587.857-27C953.87
whole body, embryo E13.CNhs10512.372-23H240.29
whole body, embryo E14.5.CNhs10578.420-27D242.79
whole body, embryo E14.CNhs10519.395-14B138.78
whole body, embryo E16.CNhs10514.453-14F235.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G536.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G537.70
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G533.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G544.57
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G537.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.44
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G533.41
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G543.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G548.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G534.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G537.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G545.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.92
whole body, embryo E17.5.CNhs10513.490-9F930.87
whole body, embryo E17.CNhs10517.475-3I519.49
whole body, embryo E18.CNhs10516.493-3B328.77
whole body, neonate N00.CNhs10525.657-19C223.42
whole body, neonate N01.CNhs10576.659-23C630.80
whole body, neonate N06.CNhs10515.692-21D122.94
whole body, neonate N10.CNhs10518.761-6B432.69





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube7.65e-11114
structure with developmental contribution from neural crest1.39e-1092
anatomical conduit6.14e-09122
gray matter1.33e-0834
neural tube6.85e-0852
neural rod6.85e-0852
future spinal cord6.85e-0852
neural keel6.85e-0852
regional part of nervous system1.09e-0754
brain grey matter3.67e-0729
regional part of telencephalon3.67e-0729
telencephalon3.67e-0729
compound organ5.11e-0743
neurectoderm8.64e-0764
neural plate8.64e-0764
presumptive neural plate8.64e-0764
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