FFCP PHASE1:Mm9::chr18:43552915..43552929,-: Difference between revisions
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{{FFCP|EntrezGene=22240|HGNC=|MCL_coexpression_id=22|UniProt=Q62188|association_with_transcript=55bp_to_NM_009468,uc008euh.2_5end|description=CAGE_peak_11_at_Dpysl3_5end|id=chr18:43552915..43552929,-|ontology_enrichment_celltype=CL:0000540!9.59e-19!33;CL:0000047!9.59e-19!33;CL:0000031!9.59e-19!33;CL:0000404!9.59e-19!33;CL:0002319!3.95e-17!43;CL:0000221!3.98e-17!44;CL:0000133!3.98e-17!44;CL:0000393!2.71e-15!39;CL:0000211!2.71e-15!39;CL:0000055!6.31e-14!50;CL:0000117!2.80e-13!23;CL:0000337!2.80e-13!23;CL:0002321!5.16e-07!70;CL:0000220!5.16e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.80e-24,33;CL:0000047,2.80e-24,33;CL:0000031,2.80e-24,33;CL:0000404,2.80e-24,33;CL:0000117,1.06e-20,23;CL:0000337,1.06e-20,23;CL:0000393,1.69e-19,39;CL:0000211,1.69e-19,39;CL:0002319,4.61e-17,43;CL:0000221,1.60e-16,44;CL:0000133,1.60e-16,44;CL:0002609,5.92e-12,6;CL:0002321,7.16e-09,70;CL:0002608,8.27e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.54e-12!102;UBERON:0000924!8.54e-12!102;UBERON:0006601!8.54e-12!102;UBERON:0000073!8.67e-12!75;UBERON:0001016!8.67e-12!75;UBERON:0001017!3.51e-11!73;UBERON:0005743!3.51e-11!73;UBERON:0002346!1.78e-09!71;UBERON:0003075!1.78e-09!71;UBERON:0007284!1.78e-09!71;UBERON:0000010!6.15e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.08e-11,34;UBERON:0001017,1.67e-10,73;UBERON:0001016,4.91e-10,75;UBERON:0004121,1.80e-09,95;UBERON:0000924,1.80e-09,95;UBERON:0006601,1.80e-09,95;UBERON:0001948,3.31e-09,5;UBERON:0002315,3.31e-09,5;UBERON:0002346,3.42e-09,64;UBERON:0003075,3.42e-09,64;UBERON:0007284,3.42e-09,64;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6;UBERON:0010371,2.51e-07,73|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,14.3644687210314,8.99284664762456,13.3104594736298,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,17.3161652555158,14.9856591548177,15.984697062705,3.14216082844184,2.20868540951614,13.229006315215,21.8527673921579,18.3843757322004,0,0.383062014255563,0,12.3973110466382,19.212405156506,9.37644067002168,0.279182999001381,0.56276261003168,0.15279824777681,3.83017161115768,4.9830088279686,10.2519695203915,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.753613202763113,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,18.2198810563653,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,2.06911893990126,0.900310649026746,0.90422890701429,1.49680298132921,1.5373646434182,1.21812241927647,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0.536546802799238,0.233530684734339,0,0,0,0,0,0,0,22.8448239482011,0,0,0.426576501070468,0,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.94652465824877,1.56175497718655,1.93881057959519,0.955875191810208,2.22798674082394,1.13230612315533,0.809621403349789,2.63030272120181,1.58115111178609,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,1.71469628025274,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.648032044930808,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0,0,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,1.03787347584177,0.798049746802062,2.21953687480374,0.972426868273176,2.72497111416377,1.65459157605013,1.55572709461131,0.618105171716683,1.60459604795908,1.51618327058278,0.50695859978048,0.754505365544305,0.842773567228942,0.960377286073039,1.89537047553524,0.476293691283074,2.66533949673168,1.54327376370964,1.64834360321323,2.06078488188156,0.342869252385415,1.06485483695602,1.66905332963125,0.872078499793971,1.31753132581463,1.35383372626682,1.64635175585495,1.05227884575137,1.35804113845862,0,1.06771516311757,2.36410757701352,1.22769312950907,2.16911577660352,0.964533054905707,2.74791635731741,0.467863216890817,1.07435527024149,0.382576664137687,0,0|short_description=p11@Dpysl3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22240 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62188 | |||
|association_with_transcript=55bp_to_NM_009468,uc008euh.2_5end | |||
|cluster_id=chr18:43552915..43552929,- | |||
|description=CAGE_peak_11_at_Dpysl3_5end | |||
|id=chr18:43552915..43552929,- | |||
|ontology_enrichment_celltype=CL:0000540!9.59e-19!33;CL:0000047!9.59e-19!33;CL:0000031!9.59e-19!33;CL:0000404!9.59e-19!33;CL:0002319!3.95e-17!43;CL:0000221!3.98e-17!44;CL:0000133!3.98e-17!44;CL:0000393!2.71e-15!39;CL:0000211!2.71e-15!39;CL:0000055!6.31e-14!50;CL:0000117!2.80e-13!23;CL:0000337!2.80e-13!23;CL:0002321!5.16e-07!70;CL:0000220!5.16e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.80e-24,33;CL:0000047,2.80e-24,33;CL:0000031,2.80e-24,33;CL:0000404,2.80e-24,33;CL:0000117,1.06e-20,23;CL:0000337,1.06e-20,23;CL:0000393,1.69e-19,39;CL:0000211,1.69e-19,39;CL:0002319,4.61e-17,43;CL:0000221,1.60e-16,44;CL:0000133,1.60e-16,44;CL:0002609,5.92e-12,6;CL:0002321,7.16e-09,70;CL:0002608,8.27e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.54e-12!102;UBERON:0000924!8.54e-12!102;UBERON:0006601!8.54e-12!102;UBERON:0000073!8.67e-12!75;UBERON:0001016!8.67e-12!75;UBERON:0001017!3.51e-11!73;UBERON:0005743!3.51e-11!73;UBERON:0002346!1.78e-09!71;UBERON:0003075!1.78e-09!71;UBERON:0007284!1.78e-09!71;UBERON:0000010!6.15e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.08e-11,34;UBERON:0001017,1.67e-10,73;UBERON:0001016,4.91e-10,75;UBERON:0004121,1.80e-09,95;UBERON:0000924,1.80e-09,95;UBERON:0006601,1.80e-09,95;UBERON:0001948,3.31e-09,5;UBERON:0002315,3.31e-09,5;UBERON:0002346,3.42e-09,64;UBERON:0003075,3.42e-09,64;UBERON:0007284,3.42e-09,64;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6;UBERON:0010371,2.51e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,14.3644687210314,8.99284664762456,13.3104594736298,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,17.3161652555158,14.9856591548177,15.984697062705,3.14216082844184,2.20868540951614,13.229006315215,21.8527673921579,18.3843757322004,0,0.383062014255563,0,12.3973110466382,19.212405156506,9.37644067002168,0.279182999001381,0.56276261003168,0.15279824777681,3.83017161115768,4.9830088279686,10.2519695203915,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.753613202763113,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,18.2198810563653,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,2.06911893990126,0.900310649026746,0.90422890701429,1.49680298132921,1.5373646434182,1.21812241927647,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.196764231747404,0,0,0.536546802799238,0.233530684734339,0,0,0,0,0,0,0,22.8448239482011,0,0,0.426576501070468,0,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0.494096864172033,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.94652465824877,1.56175497718655,1.93881057959519,0.955875191810208,2.22798674082394,1.13230612315533,0.809621403349789,2.63030272120181,1.58115111178609,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,1.71469628025274,0.177340233642274,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.648032044930808,0.418176592028937,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0,0,0.179026695667481,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,1.03787347584177,0.798049746802062,2.21953687480374,0.972426868273176,2.72497111416377,1.65459157605013,1.55572709461131,0.618105171716683,1.60459604795908,1.51618327058278,0.50695859978048,0.754505365544305,0.842773567228942,0.960377286073039,1.89537047553524,0.476293691283074,2.66533949673168,1.54327376370964,1.64834360321323,2.06078488188156,0.342869252385415,1.06485483695602,1.66905332963125,0.872078499793971,1.31753132581463,1.35383372626682,1.64635175585495,1.05227884575137,1.35804113845862,0,1.06771516311757,2.36410757701352,1.22769312950907,2.16911577660352,0.964533054905707,2.74791635731741,0.467863216890817,1.07435527024149,0.382576664137687,0,0 | |||
|short_description=p11@Dpysl3 | |||
}} |
Revision as of 19:34, 5 August 2015
Short description: | p11@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 55bp_to_NM_009468, uc008euh.2_5end |
EntrezGene: | 22240 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.80e-24 | 33 |
neuronal stem cell | 2.80e-24 | 33 |
neuroblast | 2.80e-24 | 33 |
electrically signaling cell | 2.80e-24 | 33 |
CNS neuron (sensu Vertebrata) | 1.06e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-20 | 23 |
electrically responsive cell | 1.69e-19 | 39 |
electrically active cell | 1.69e-19 | 39 |
neural cell | 4.61e-17 | 43 |
ectodermal cell | 1.60e-16 | 44 |
neurectodermal cell | 1.60e-16 | 44 |
neuron of cerebral cortex | 5.92e-12 | 6 |
embryonic cell | 7.16e-09 | 70 |
hippocampal neuron | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.08e-11 | 34 |
central nervous system | 1.67e-10 | 73 |
nervous system | 4.91e-10 | 75 |
ectoderm-derived structure | 1.80e-09 | 95 |
ectoderm | 1.80e-09 | 95 |
presumptive ectoderm | 1.80e-09 | 95 |
regional part of spinal cord | 3.31e-09 | 5 |
gray matter of spinal cord | 3.31e-09 | 5 |
neurectoderm | 3.42e-09 | 64 |
neural plate | 3.42e-09 | 64 |
presumptive neural plate | 3.42e-09 | 64 |
spinal cord | 1.42e-07 | 6 |
dorsal region element | 1.42e-07 | 6 |
dorsum | 1.42e-07 | 6 |
ecto-epithelium | 2.51e-07 | 73 |