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FFCP PHASE1:Mm9::chr3:116510985..116511054,-: Difference between revisions

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{{FFCP|EntrezGene=77559|HGNC=|MCL_coexpression_id=35|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159742_5end|description=CAGE_peak_1_at_Agl_5end|id=chr3:116510985..116511054,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.82e-12!47;UBERON:0005256!3.83e-09!47;UBERON:0007100!2.89e-08!18;UBERON:0000948!2.89e-08!18;UBERON:0005498!2.89e-08!18;UBERON:0004140!2.89e-08!18;UBERON:0009881!2.89e-08!18;UBERON:0004141!2.89e-08!18;UBERON:0003084!2.89e-08!18;UBERON:0007005!2.89e-08!18;UBERON:0004139!2.89e-08!18;UBERON:0004291!2.89e-08!18;UBERON:0004111!3.45e-08!122;UBERON:0004535!8.14e-08!23;UBERON:0001009!8.14e-08!23;UBERON:0003103!1.53e-07!43;UBERON:0000025!8.48e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.82e-12,47;UBERON:0003104,2.41e-12,61;UBERON:0009142,2.41e-12,61;UBERON:0005256,1.43e-09,45;UBERON:0007100,2.89e-08,18;UBERON:0000948,2.89e-08,18;UBERON:0005498,2.89e-08,18;UBERON:0004140,2.89e-08,18;UBERON:0009881,2.89e-08,18;UBERON:0004141,2.89e-08,18;UBERON:0003084,2.89e-08,18;UBERON:0007005,2.89e-08,18;UBERON:0004139,2.89e-08,18;UBERON:0004291,2.89e-08,18;UBERON:0004111,3.58e-08,122;UBERON:0004535,8.13e-08,23;UBERON:0001009,8.13e-08,23;UBERON:0003103,1.52e-07,43;UBERON:0000025,8.78e-07,114|phase1_expression=7.68714466103011,3.83872948403297,0,6.0492842261366,7.01254021924886,1.51091344720701,2.80335168714631,0.903863264091034,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,0.262261207256992,2.33176833270964,1.21485160433896,1.39912375625629,3.94327706697797,4.38766187538364,1.69755860719212,10.2051948181284,5.65958421845046,2.08959831311148,3.67982572424835,2.2940928106717,1.72269589234506,2.15380998079537,1.939241094173,3.04037471130198,5.04060259519861,1.33038306393183,7.62036808151557,9.22597181376855,0,1.44425809875637,1.49611180822643,0.816677425049476,67.3835925486421,40.6294379152376,58.6346593250654,57.6466858270394,62.840184616177,68.4569597773927,10.0717454380462,8.41428529121971,12.664725899156,3.9119567217402,11.1192829754028,9.66619204031676,13.026803237977,9.51907667052465,5.75010257459886,2.34895648480831,0,4.7053131879945,9.51859913333004,17.1920063963254,15.9858348606007,2.22548106945558,1.5869729378161,2.53532561402472,1.69422266034566,0.889294796111139,2.6996991518442,1.97773272513395,3.5524005747305,4.79360176829448,4.99483796918021,2.48855069540346,1.62007125998029,1.47227472945967,11.9973413449598,9.05561017901615,2.69479758272899,2.01275489138296,0.919218786610021,12.1127469099328,20.6853487698004,14.7462271925994,1.84640802822271,4.02545631850602,1.56274011167028,16.7509799400829,13.5063026407603,17.4190002465564,12.374400589894,12.9558229527184,5.40558392893372,3.55913108665965,6.8014404096107,9.27566363845369,18.9293252935905,6.79971333707751,40.4777393728363,57.1803247353949,53.7632264516803,100.558204814334,12.4414135481982,9.87186817490901,10.9535268098205,9.29566570526091,10.2661181931454,0,0,4.32982082022428,3.04031838570118,2.52762222507392,30.2587281255509,5.69663344023778,36.5167662099469,8.50078101154066,19.1813251336649,20.0635482612771,26.3764620967089,27.2805800554835,34.1813128416717,17.7980376768749,82.4216334443496,55.7304647728421,55.4860295319613,95.8452190118108,69.822036451472,22.3670113461747,16.3957246326466,19.2690970268379,9.19645398750929,3.11519323715393,4.19931911695385,2.54140454146129,24.2660835835813,15.5550204958333,3.39266750704734,17.2086076990354,13.2972037811772,17.6619837875626,18.4955039897244,8.96186401882783,39.0637887715692,6.31806896084187,24.6216971387175,3.12289063110489,4.13823787980251,4.50155324513373,7.23383125611432,8.36848939561333,12.811372028485,10.4945931506896,32.337921342377,1.72454394346274,2.83659120251729,3.51902248327898,2.6303487891309,5.83899223373756,4.87553033131033,7.40815691068596,3.58261680273288,1.40442637462647,2.31613116403244,2.27330799516474,19.4698226183372,21.8109235782419,23.5881300513929,31.9605393040034,22.2343581874566,22.2144642557825,28.3691412595498,26.2907933371627,47.2899636587036,73.5582529113258,79.1287176861239,111.712819554189,121.053589588175,129.315017906429,141.453565373432,14.7202963994889,5.35103984372279,7.26921322564356,7.1401652999157,2.34617075588757,4.41249676534833,6.05677068213839,6.85723983719365,9.11749979763968,7.03834816616469,12.8122846617018,8.39964669092456,9.0480675168097,7.56034593756373,7.79856348476481,6.29173586057955,11.8875927431082,10.3553462092271,5.87970492954553,8.22589290790047,10.1436962105772,16.2921062276251,15.3222464862424,14.097299797954,18.6547784516559,34.2455543312677,31.399745568275,32.0832626196681,73.5202515176129,5.33904338291501,9.04171377520734,8.7696223830093,9.53442570525964,15.9176925436595,22.6617008085464,25.0295639582205,17.3484692649288,29.6526326243128,34.5043695665651,33.1205443424968,56.79085650685,57.3354052939944,48.6166990644382,43.419916922703,11.2699446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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:77559
|HGNC=
|MCL_coexpression_id=35
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000159742_5end
|cluster_id=chr3:116510985..116511054,-
|description=CAGE_peak_1_at_Agl_5end
|id=chr3:116510985..116511054,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.82e-12,47;UBERON:0003104,2.41e-12,61;UBERON:0009142,2.41e-12,61;UBERON:0005256,1.43e-09,45;UBERON:0007100,2.89e-08,18;UBERON:0000948,2.89e-08,18;UBERON:0005498,2.89e-08,18;UBERON:0004140,2.89e-08,18;UBERON:0009881,2.89e-08,18;UBERON:0004141,2.89e-08,18;UBERON:0003084,2.89e-08,18;UBERON:0007005,2.89e-08,18;UBERON:0004139,2.89e-08,18;UBERON:0004291,2.89e-08,18;UBERON:0004111,3.58e-08,122;UBERON:0004535,8.13e-08,23;UBERON:0001009,8.13e-08,23;UBERON:0003103,1.52e-07,43;UBERON:0000025,8.78e-07,114
|phase1_expression=7.68714466103011,3.83872948403297,0,6.0492842261366,7.01254021924886,1.51091344720701,2.80335168714631,0.903863264091034,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,0.262261207256992,2.33176833270964,1.21485160433896,1.39912375625629,3.94327706697797,4.38766187538364,1.69755860719212,10.2051948181284,5.65958421845046,2.08959831311148,3.67982572424835,2.2940928106717,1.72269589234506,2.15380998079537,1.939241094173,3.04037471130198,5.04060259519861,1.33038306393183,7.62036808151557,9.22597181376855,0,1.44425809875637,1.49611180822643,0.816677425049476,67.3835925486421,40.6294379152376,58.6346593250654,57.6466858270394,62.840184616177,68.4569597773927,10.0717454380462,8.41428529121971,12.664725899156,3.9119567217402,11.1192829754028,9.66619204031676,13.026803237977,9.51907667052465,5.75010257459886,2.34895648480831,0,4.7053131879945,9.51859913333004,17.1920063963254,15.9858348606007,2.22548106945558,1.5869729378161,2.53532561402472,1.69422266034566,0.889294796111139,2.6996991518442,1.97773272513395,3.5524005747305,4.79360176829448,4.99483796918021,2.48855069540346,1.62007125998029,1.47227472945967,11.9973413449598,9.05561017901615,2.69479758272899,2.01275489138296,0.919218786610021,12.1127469099328,20.6853487698004,14.7462271925994,1.84640802822271,4.02545631850602,1.56274011167028,16.7509799400829,13.5063026407603,17.4190002465564,12.374400589894,12.9558229527184,5.40558392893372,3.55913108665965,6.8014404096107,9.27566363845369,18.9293252935905,6.79971333707751,40.4777393728363,57.1803247353949,53.7632264516803,100.558204814334,12.4414135481982,9.87186817490901,10.9535268098205,9.29566570526091,10.2661181931454,0,0,4.32982082022428,3.04031838570118,2.52762222507392,30.2587281255509,5.69663344023778,36.5167662099469,8.50078101154066,19.1813251336649,20.0635482612771,26.3764620967089,27.2805800554835,34.1813128416717,17.7980376768749,82.4216334443496,55.7304647728421,55.4860295319613,95.8452190118108,69.822036451472,22.3670113461747,16.3957246326466,19.2690970268379,9.19645398750929,3.11519323715393,4.19931911695385,2.54140454146129,24.2660835835813,15.5550204958333,3.39266750704734,17.2086076990354,13.2972037811772,17.6619837875626,18.4955039897244,8.96186401882783,39.0637887715692,6.31806896084187,24.6216971387175,3.12289063110489,4.13823787980251,4.50155324513373,7.23383125611432,8.36848939561333,12.811372028485,10.4945931506896,32.337921342377,1.72454394346274,2.83659120251729,3.51902248327898,2.6303487891309,5.83899223373756,4.87553033131033,7.40815691068596,3.58261680273288,1.40442637462647,2.31613116403244,2.27330799516474,19.4698226183372,21.8109235782419,23.5881300513929,31.9605393040034,22.2343581874566,22.2144642557825,28.3691412595498,26.2907933371627,47.2899636587036,73.5582529113258,79.1287176861239,111.712819554189,121.053589588175,129.315017906429,141.453565373432,14.7202963994889,5.35103984372279,7.26921322564356,7.1401652999157,2.34617075588757,4.41249676534833,6.05677068213839,6.85723983719365,9.11749979763968,7.03834816616469,12.8122846617018,8.39964669092456,9.0480675168097,7.56034593756373,7.79856348476481,6.29173586057955,11.8875927431082,10.3553462092271,5.87970492954553,8.22589290790047,10.1436962105772,16.2921062276251,15.3222464862424,14.097299797954,18.6547784516559,34.2455543312677,31.399745568275,32.0832626196681,73.5202515176129,5.33904338291501,9.04171377520734,8.7696223830093,9.53442570525964,15.9176925436595,22.6617008085464,25.0295639582205,17.3484692649288,29.6526326243128,34.5043695665651,33.1205443424968,56.79085650685,57.3354052939944,48.6166990644382,43.419916922703,11.2699446001629,3.60033682363921,5.0519142697028,5.94107800213158,10.0916806764056,9.21284415929987,14.9967493758189,10.5372169843211,12.2955412402829,11.2946991720875,11.6401981119966,16.3863314715738,18.8226630233826,13.8863096238251,15.0791283939272,10.3342079925555,19.6705709207614,13.7968373152366,28.2569038378514,29.420133334643,9.01642199571715,337.301158745042,7.88770548540642,7.41833614163613,9.04778270477756,7.88597033243422,10.4715376818725,10.190755108398,8.90583543684768,11.9824901743638,9.09161889277004,13.4954952897159,19.5877317587411,8.90328018336276,8.1443479676788,16.0021019283359,5.30980553359851,4.61283208694465,5.74414758233027,8.86443874852721,7.67784921490009,5.84126781093462,9.04499026088774,6.5436071305951,9.9819265947722,9.16506598013866,11.5960469432499,10.3135543248187,11.9153862013826,3.42116078659489,3.88076051348264,2.14337035031592,4.25616560741457,6.77801506887868,6.2528627828806,3.04464949114599,7.74416636610244,19.4885505194715,30.2123905335298,31.8230468177056,15.6620493895028,15.9829251059613,9.54978752025092,8.042904087508,9.03590593552537,40.2372905362806,5.63873906632914,6.81076664278634,9.07453184111587,6.78126445216888,3.96413260390973,4.80434163733698,2.37969801991397,1.81936888020755,2.3493995546752,7.63736494412091,3.00519193902079,5.69294507955176,8.3164112432787,11.7089445768102,13.3201163885168,17.1277719908722,17.4398791580459,20.9404753587224,11.7949625695532,29.8242870281724,1.12738587736838,5.83114529571517,5.79104716599842,7.19469396872976,7.23295011475294,7.7719817725758,10.3274370008263,9.24451132392046,8.28388820963116,3.14059357073808,38.3079908322961,3.79213344753814,3.85177909051312,3.08132871494482,4.28738715826724,2.8644271306797,3.57626438606277,2.40390899039938,2.51072196196781,3.93769154797776,1.447929326445,2.01652370273681,2.33898913775406,3.07877893249054,3.62318396762864,195.668321059927,3.99574716073316,3.3194126945506,5.03653849092235,31.8762830153114,10.322536149815,13.1869169472431,12.0046292284277,16.551879433167,12.9892923801925,14.2700823317225,13.7494923225455,14.6075204992134,12.3314853558716,12.0863023582352,14.1754725048679,9.00642406448441,8.60970577069989,11.9084871702919,2.90604573235695,1.99512436700516,4.78054096111576,5.59145449257076,6.91723436672342,10.6629234901008,21.7801793245583,22.0457511245617,19.2551525755089,18.1941992469934,19.010947491768,19.9943921869241,19.945641091085,18.1831432829829,18.7239628795299,12.859929664643,19.8162197365703,18.5192851645157,17.3076078337389,14.5726930933053,14.7433778525729,18.9899112590491,23.6051828047848,19.040380578835,18.3513291809895,18.6152137361688,18.1098693144045,15.2580432633949,17.2471224584244,18.5176949647054,20.6424931536063,18.6173471689815,16.7784727699573,15.4936841185966,15.046715656529,10.2422336954558,20.3520499347505,27.5034949181822,45.3353347003159,51.1772092357276,69.5603506861264
|short_description=p1@Agl
}}

Revision as of 22:19, 5 August 2015

Short description:p1@Agl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Agl_5end
Coexpression cluster:MCL_coexpression_mm9:35
Association with transcript: 0bp_to_ENSMUST00000159742_5end
EntrezGene:77559
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Agl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G867.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H140.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H358.63
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G957.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H262.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H468.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.67
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C840.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F457.18
Mouse hepatocyte, donor8.CNhs13091.11824-124F653.76
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7100.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.26
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D736.52
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F526.38
adrenal gland, neonate N00.CNhs11191.1311-23C127.28
adrenal gland, neonate N25.CNhs11223.1377-27I334.18
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H182.42
bone (os femoris), adult.CNhs10483.56-12G255.73
bone (os femoris), neonate N02.CNhs11227.1985-43F555.49
bone (os femoris), neonate N16.CNhs11225.1525-43A695.85
bone (os femoris), neonate N20.CNhs11195.1350-25C369.82
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B216.40
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A424.27
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D517.21
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B218.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.96
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A239.06
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G424.62
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D47.23
eyeball, neonate N00.CNhs11207.633-15C68.37
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G810.49
eyeball, neonate N16.CNhs11188.777-19A232.34
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E919.47
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I923.59
heart, embryo E14.CNhs10597.403-26D431.96
heart, embryo E15.CNhs11017.431-16C822.23
heart, embryo E16.CNhs11021.457-17C622.21
heart, embryo E17.CNhs11025.479-18E528.37
heart, embryo E18.CNhs11030.1283-20G326.29
heart, neonate N00.CNhs11213.639-21E347.29
heart, neonate N03.CNhs11221.1349-25I273.56
heart, neonate N10.CNhs11118.749-24G179.13
heart, neonate N16.CNhs11209.782-15G1111.71
heart, neonate N20.CNhs11127.821-26I6121.05
heart, neonate N25.CNhs11196.1351-25D3129.32
heart, neonate N30.CNhs11202.1390-42D2141.45
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E311.89
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G714.10
kidney, neonate N10.CNhs11206.758-6D518.65
kidney, neonate N20.CNhs11113.832-19I134.25
kidney, neonate N25.CNhs11122.1353-25F331.40
kidney, neonate N30.CNhs11203.1385-42H132.08
liver, adult pregnant day01.CNhs10466.508-5B273.52
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D79.53
liver, embryo E16.CNhs10523.462-17F515.92
liver, embryo E17.CNhs10510.481-18A322.66
liver, embryo E18.CNhs10579.499-43G425.03
liver, neonate N00.CNhs11117.641-24F417.35
liver, neonate N03.CNhs11123.1345-25G229.65
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H233.12
liver, neonate N10.CNhs11115.751-24B956.79
liver, neonate N20.CNhs11220.823-25A357.34
liver, neonate N25.CNhs11198.1368-26H148.62
liver, neonate N30.CNhs11106.1382-42D143.42
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C610.54
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A416.39
lung, neonate N25.CNhs11119.1359-25C718.82
lung, neonate N30.CNhs11133.1394-42H213.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C228.26
medulla oblongata, neonate N30.CNhs11200.1396-42A329.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2337.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I719.59
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G616.00
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G319.49
prostate, adult.CNhs10470.859-1F830.21
skin, adult.CNhs10492.30-1C331.82
skin, neonate N00.CNhs11124.650-25G415.66
skin, neonate N03.CNhs11215.662-22H315.98
skin, neonate N06.CNhs11097.693-20I59.55
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C940.24
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D48.32
stomach, embryo E17.CNhs11006.1035-18D511.71
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B817.13
stomach, neonate N07.CNhs11210.718-18A917.44
stomach, neonate N25.CNhs11104.1355-25E420.94
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D98.28
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E238.31
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B4195.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E431.88
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.95
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.49
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B320.35
whole body, neonate N00.CNhs10525.657-19C227.50
whole body, neonate N01.CNhs10576.659-23C645.34
whole body, neonate N06.CNhs10515.692-21D151.18
whole body, neonate N10.CNhs10518.761-6B469.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.82e-1247
mesenchyme2.41e-1261
entire embryonic mesenchyme2.41e-1261
trunk mesenchyme1.43e-0945
primary circulatory organ2.89e-0818
heart2.89e-0818
primitive heart tube2.89e-0818
primary heart field2.89e-0818
anterior lateral plate mesoderm2.89e-0818
heart tube2.89e-0818
heart primordium2.89e-0818
cardiac mesoderm2.89e-0818
cardiogenic plate2.89e-0818
heart rudiment2.89e-0818
anatomical conduit3.58e-08122
cardiovascular system8.13e-0823
circulatory system8.13e-0823
compound organ1.52e-0743
tube8.78e-07114
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