FFCP PHASE1:Mm9::chr5:115994091..115994109,+: Difference between revisions
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{{FFCP|EntrezGene=19303|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000127345_5end|description=CAGE_peak_6_at_Pxn_5end|id=chr5:115994091..115994109,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.91e-08,3;CL:0002202,1.91e-08,3;CL:0000069,1.91e-08,3;CL:0002632,1.91e-08,3;CL:0002368,1.91e-08,3;CL:0000307,1.91e-08,3;CL:0000377,1.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.43e-10!17;UBERON:0005181!6.43e-10!17;UBERON:0002224!6.43e-10!17;UBERON:0000915!6.43e-10!17;UBERON:0008947!6.43e-10!17;UBERON:0003258!6.43e-10!17;UBERON:0000464!2.79e-09!57;UBERON:0002048!9.93e-08!14;UBERON:0000117!9.93e-08!14;UBERON:0000171!9.93e-08!14;UBERON:0000170!9.93e-08!14;UBERON:0005597!9.93e-08!14;UBERON:0000118!9.93e-08!14;UBERON:0000466!7.22e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.36e-25,17;UBERON:0005181,3.36e-25,17;UBERON:0002224,3.36e-25,17;UBERON:0000915,3.36e-25,17;UBERON:0008947,3.36e-25,17;UBERON:0003258,3.36e-25,17;UBERON:0002048,1.33e-18,14;UBERON:0000117,1.33e-18,14;UBERON:0000171,1.33e-18,14;UBERON:0000170,1.33e-18,14;UBERON:0005597,1.33e-18,14;UBERON:0000118,1.33e-18,14;UBERON:0005153,6.52e-15,17;UBERON:0005157,2.48e-12,20;UBERON:0000065,1.35e-08,41;UBERON:0003126,1.91e-08,3;UBERON:0001005,1.91e-08,3;UBERON:0007196,1.91e-08,3;UBERON:0001558,1.91e-08,3;UBERON:0001004,2.55e-08,42|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,0.7813353445238,3.14114246384279,5.88231488031014,3.41522742479223,5.34061388334269,0.125896817975577,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,3.46385665617943,2.02687892380079,4.04419556011827,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,7.02673912827713,5.86450779077674,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0.511430914660661,0,0,0.509196819251581,0.746441823660558,2.0217820674694,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0.581857461502877,0.280543279561274,0.69560190836683,0.590440591918409,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,1.40814148973101,2.51259386162724,2.14239276797412,1.56106918286239,2.20689201748667,2.21464689648775,2.23236676120482,2.13022309130459,1.55416483679306,2.4590339958857,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.728341908464944,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,0.258428293168221,0,0,0.316036757935816,2.10837217149998,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,3.54680467284547,1.42695054081656,2.13913726782757,2.43571959291679,0,0,0,0.32977250588296,0,0.180938774784468,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.352071715937262,1.3020438484395,2.83120229949419,2.89900944991207,1.44015003128933,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.412070114477788,0,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,1.22223702461276,0,0.949080144993393,0.492522411877817,0,1.08455788830176,1.15743966588685,0,0.233931608445408,0.429742108096597,1.14772999241306,0.882365676478062,0.463735671240843|short_description=p6@Pxn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19303 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000127345_5end | |||
|cluster_id=chr5:115994091..115994109,+ | |||
|description=CAGE_peak_6_at_Pxn_5end | |||
|id=chr5:115994091..115994109,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.91e-08,3;CL:0002202,1.91e-08,3;CL:0000069,1.91e-08,3;CL:0002632,1.91e-08,3;CL:0002368,1.91e-08,3;CL:0000307,1.91e-08,3;CL:0000377,1.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!6.43e-10!17;UBERON:0005181!6.43e-10!17;UBERON:0002224!6.43e-10!17;UBERON:0000915!6.43e-10!17;UBERON:0008947!6.43e-10!17;UBERON:0003258!6.43e-10!17;UBERON:0000464!2.79e-09!57;UBERON:0002048!9.93e-08!14;UBERON:0000117!9.93e-08!14;UBERON:0000171!9.93e-08!14;UBERON:0000170!9.93e-08!14;UBERON:0005597!9.93e-08!14;UBERON:0000118!9.93e-08!14;UBERON:0000466!7.22e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.36e-25,17;UBERON:0005181,3.36e-25,17;UBERON:0002224,3.36e-25,17;UBERON:0000915,3.36e-25,17;UBERON:0008947,3.36e-25,17;UBERON:0003258,3.36e-25,17;UBERON:0002048,1.33e-18,14;UBERON:0000117,1.33e-18,14;UBERON:0000171,1.33e-18,14;UBERON:0000170,1.33e-18,14;UBERON:0005597,1.33e-18,14;UBERON:0000118,1.33e-18,14;UBERON:0005153,6.52e-15,17;UBERON:0005157,2.48e-12,20;UBERON:0000065,1.35e-08,41;UBERON:0003126,1.91e-08,3;UBERON:0001005,1.91e-08,3;UBERON:0007196,1.91e-08,3;UBERON:0001558,1.91e-08,3;UBERON:0001004,2.55e-08,42 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,2.92972141515835,0.7813353445238,3.14114246384279,5.88231488031014,3.41522742479223,5.34061388334269,0.125896817975577,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,3.46385665617943,2.02687892380079,4.04419556011827,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,7.02673912827713,5.86450779077674,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0.511430914660661,0,0,0.509196819251581,0.746441823660558,2.0217820674694,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0.581857461502877,0.280543279561274,0.69560190836683,0.590440591918409,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,1.29327233116623,0,0.162964976442026,0.339490171550376,1.40814148973101,2.51259386162724,2.14239276797412,1.56106918286239,2.20689201748667,2.21464689648775,2.23236676120482,2.13022309130459,1.55416483679306,2.4590339958857,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.728341908464944,0.302323556964751,0.188605079755898,0.885905678642318,0.922305443831782,0.258428293168221,0,0,0.316036757935816,2.10837217149998,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,3.54680467284547,1.42695054081656,2.13913726782757,2.43571959291679,0,0,0,0.32977250588296,0,0.180938774784468,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.352071715937262,1.3020438484395,2.83120229949419,2.89900944991207,1.44015003128933,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0.412070114477788,0,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.832326981263301,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,1.22223702461276,0,0.949080144993393,0.492522411877817,0,1.08455788830176,1.15743966588685,0,0.233931608445408,0.429742108096597,1.14772999241306,0.882365676478062,0.463735671240843 | |||
|short_description=p6@Pxn | |||
}} |
Revision as of 03:09, 6 August 2015
Short description: | p6@Pxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pxn_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000127345_5end |
EntrezGene: | 19303 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.91e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.91e-08 | 3 |
branched duct epithelial cell | 1.91e-08 | 3 |
epithelial cell of lower respiratory tract | 1.91e-08 | 3 |
respiratory epithelial cell | 1.91e-08 | 3 |
tracheal epithelial cell | 1.91e-08 | 3 |
tracheoblast | 1.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 3.36e-25 | 17 |
thoracic segment organ | 3.36e-25 | 17 |
thoracic cavity | 3.36e-25 | 17 |
thoracic segment of trunk | 3.36e-25 | 17 |
respiratory primordium | 3.36e-25 | 17 |
endoderm of foregut | 3.36e-25 | 17 |
lung | 1.33e-18 | 14 |
respiratory tube | 1.33e-18 | 14 |
respiration organ | 1.33e-18 | 14 |
pair of lungs | 1.33e-18 | 14 |
lung primordium | 1.33e-18 | 14 |
lung bud | 1.33e-18 | 14 |
epithelial bud | 6.52e-15 | 17 |
epithelial fold | 2.48e-12 | 20 |
respiratory tract | 1.35e-08 | 41 |
trachea | 1.91e-08 | 3 |
respiratory airway | 1.91e-08 | 3 |
tracheobronchial tree | 1.91e-08 | 3 |
lower respiratory tract | 1.91e-08 | 3 |
respiratory system | 2.55e-08 | 42 |