FFCP PHASE1:Mm9::chr3:144512265..144512266,-: Difference between revisions
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{{FFCP|EntrezGene=229927|HGNC=|MCL_coexpression_id=1128|UniProt=Q91ZF5,E9PUL3|association_with_transcript=0bp_to_ENSMUST00000029931,NM_139148,uc012cyz.1_5end|description=CAGE_peak_1_at_Clca4_5end|id=chr3:144512265..144512266,-|ontology_enrichment_celltype=CL:0002076!3.77e-27!15;CL:0000066!1.27e-23!25;CL:0002563!8.38e-21!9;CL:0002251!8.38e-21!9;CL:0000223!4.19e-20!20;CL:0002250!1.35e-16!3;CL:0000068!5.04e-16!3;CL:0002202!5.04e-16!3;CL:0000069!5.04e-16!3;CL:0002632!5.04e-16!3;CL:0002368!5.04e-16!3;CL:0000307!5.04e-16!3;CL:0000377!5.04e-16!3;CL:0000239!1.83e-08!6;CL:0000677!1.83e-08!6;CL:0000212!1.83e-08!6;CL:0000584!1.83e-08!6;CL:0000063!5.23e-08!66;CL:0000473!1.39e-07!3;CL:0000627!1.39e-07!3;CL:0000682!1.39e-07!3;CL:0002494!1.63e-07!3;CL:0000737!1.63e-07!3;CL:0000746!1.63e-07!3;CL:0000513!1.63e-07!3;CL:0002321!1.92e-07!70;CL:0000220!1.92e-07!70;CL:0000075!2.54e-07!7|ontology_enrichment_celltype_v019_2=CL:0002250,4.27e-29,3;CL:0002563,1.40e-17,9;CL:0002251,1.40e-17,9;CL:0002076,3.23e-16,15;CL:0000223,3.24e-12,20;CL:0000066,8.37e-10,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.58e-34!15;UBERON:0001242!2.28e-25!13;UBERON:0000060!2.28e-25!13;UBERON:0001262!2.28e-25!13;UBERON:0004786!2.28e-25!13;UBERON:0004923!4.08e-21!24;UBERON:0003350!8.38e-21!9;UBERON:0004808!8.38e-21!9;UBERON:0001277!8.38e-21!9;UBERON:0000485!5.82e-17!11;UBERON:0003126!5.04e-16!3;UBERON:0001005!5.04e-16!3;UBERON:0007196!5.04e-16!3;UBERON:0001558!5.04e-16!3;UBERON:0001962!3.84e-12!2;UBERON:0001961!3.84e-12!2;UBERON:0001744!3.84e-12!2;UBERON:0002465!2.23e-08!3;UBERON:0000331!3.09e-08!3;UBERON:0002116!3.09e-08!3;UBERON:0001204!3.09e-08!3;UBERON:0001168!3.09e-08!3;UBERON:0000064!2.96e-07!99;UBERON:0000160!4.98e-07!43;UBERON:0003199!7.38e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-41,15;UBERON:0001242,8.20e-27,13;UBERON:0001262,8.20e-27,13;UBERON:0004786,8.20e-27,13;UBERON:0004923,8.23e-26,24;UBERON:0001962,6.43e-21,2;UBERON:0001961,6.43e-21,2;UBERON:0001744,6.43e-21,2;UBERON:0003350,1.40e-17,9;UBERON:0004808,1.40e-17,9;UBERON:0001277,1.40e-17,9;UBERON:0000485,1.82e-14,11;UBERON:0002465,2.70e-14,3;UBERON:0000331,4.93e-14,3;UBERON:0002116,4.93e-14,3;UBERON:0001204,4.93e-14,3;UBERON:0001168,4.93e-14,3;UBERON:0000160,2.80e-11,31;UBERON:0003199,2.90e-11,1;UBERON:0002108,9.05e-11,4;UBERON:0005409,2.06e-07,47|phase1_expression=0,0,0.454999239389536,0,0,0.839396359559449,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.12936705920906,0,0.430761996159075,0.646413698057667,2.47030445293286,0,2.43903561720835,0,0,0,1.1554064790051,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Clca4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:229927 | |||
|HGNC= | |||
|MCL_coexpression_id=1128 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91ZF5,uniprot:E9PUL3 | |||
|association_with_transcript=0bp_to_ENSMUST00000029931,NM_139148,uc012cyz.1_5end | |||
|cluster_id=chr3:144512265..144512266,- | |||
|description=CAGE_peak_1_at_Clca4_5end | |||
|id=chr3:144512265..144512266,- | |||
|ontology_enrichment_celltype=CL:0002076!3.77e-27!15;CL:0000066!1.27e-23!25;CL:0002563!8.38e-21!9;CL:0002251!8.38e-21!9;CL:0000223!4.19e-20!20;CL:0002250!1.35e-16!3;CL:0000068!5.04e-16!3;CL:0002202!5.04e-16!3;CL:0000069!5.04e-16!3;CL:0002632!5.04e-16!3;CL:0002368!5.04e-16!3;CL:0000307!5.04e-16!3;CL:0000377!5.04e-16!3;CL:0000239!1.83e-08!6;CL:0000677!1.83e-08!6;CL:0000212!1.83e-08!6;CL:0000584!1.83e-08!6;CL:0000063!5.23e-08!66;CL:0000473!1.39e-07!3;CL:0000627!1.39e-07!3;CL:0000682!1.39e-07!3;CL:0002494!1.63e-07!3;CL:0000737!1.63e-07!3;CL:0000746!1.63e-07!3;CL:0000513!1.63e-07!3;CL:0002321!1.92e-07!70;CL:0000220!1.92e-07!70;CL:0000075!2.54e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.27e-29,3;CL:0002563,1.40e-17,9;CL:0002251,1.40e-17,9;CL:0002076,3.23e-16,15;CL:0000223,3.24e-12,20;CL:0000066,8.37e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.58e-34!15;UBERON:0001242!2.28e-25!13;UBERON:0000060!2.28e-25!13;UBERON:0001262!2.28e-25!13;UBERON:0004786!2.28e-25!13;UBERON:0004923!4.08e-21!24;UBERON:0003350!8.38e-21!9;UBERON:0004808!8.38e-21!9;UBERON:0001277!8.38e-21!9;UBERON:0000485!5.82e-17!11;UBERON:0003126!5.04e-16!3;UBERON:0001005!5.04e-16!3;UBERON:0007196!5.04e-16!3;UBERON:0001558!5.04e-16!3;UBERON:0001962!3.84e-12!2;UBERON:0001961!3.84e-12!2;UBERON:0001744!3.84e-12!2;UBERON:0002465!2.23e-08!3;UBERON:0000331!3.09e-08!3;UBERON:0002116!3.09e-08!3;UBERON:0001204!3.09e-08!3;UBERON:0001168!3.09e-08!3;UBERON:0000064!2.96e-07!99;UBERON:0000160!4.98e-07!43;UBERON:0003199!7.38e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-41,15;UBERON:0001242,8.20e-27,13;UBERON:0001262,8.20e-27,13;UBERON:0004786,8.20e-27,13;UBERON:0004923,8.23e-26,24;UBERON:0001962,6.43e-21,2;UBERON:0001961,6.43e-21,2;UBERON:0001744,6.43e-21,2;UBERON:0003350,1.40e-17,9;UBERON:0004808,1.40e-17,9;UBERON:0001277,1.40e-17,9;UBERON:0000485,1.82e-14,11;UBERON:0002465,2.70e-14,3;UBERON:0000331,4.93e-14,3;UBERON:0002116,4.93e-14,3;UBERON:0001204,4.93e-14,3;UBERON:0001168,4.93e-14,3;UBERON:0000160,2.80e-11,31;UBERON:0003199,2.90e-11,1;UBERON:0002108,9.05e-11,4;UBERON:0005409,2.06e-07,47 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.839396359559449,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,4.12936705920906,0,0.430761996159075,0.646413698057667,2.47030445293286,0,2.43903561720835,0,0,0,1.1554064790051,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Clca4 | |||
}} |
Revision as of 04:28, 6 August 2015
Short description: | p1@Clca4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clca4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1128 |
Association with transcript: | 0bp_to_ENSMUST00000029931, NM_139148, uc012cyz.1_5end |
EntrezGene: | 229927 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.27e-29 | 3 |
intestinal epithelial cell | 1.40e-17 | 9 |
epithelial cell of alimentary canal | 1.40e-17 | 9 |
endo-epithelial cell | 3.23e-16 | 15 |
endodermal cell | 3.24e-12 | 20 |
epithelial cell | 8.37e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-41 | 15 |
intestinal mucosa | 8.20e-27 | 13 |
wall of intestine | 8.20e-27 | 13 |
gastrointestinal system mucosa | 8.20e-27 | 13 |
organ component layer | 8.23e-26 | 24 |
gut-associated lymphoid tissue | 6.43e-21 | 2 |
mucosa-associated lymphoid tissue | 6.43e-21 | 2 |
lymphoid tissue | 6.43e-21 | 2 |
epithelium of mucosa | 1.40e-17 | 9 |
gastrointestinal system epithelium | 1.40e-17 | 9 |
intestinal epithelium | 1.40e-17 | 9 |
simple columnar epithelium | 1.82e-14 | 11 |
lymphoid system | 2.70e-14 | 3 |
ileal mucosa | 4.93e-14 | 3 |
ileum | 4.93e-14 | 3 |
mucosa of small intestine | 4.93e-14 | 3 |
wall of small intestine | 4.93e-14 | 3 |
intestine | 2.80e-11 | 31 |
egg chamber | 2.90e-11 | 1 |
small intestine | 9.05e-11 | 4 |
gastrointestinal system | 2.06e-07 | 47 |