FFCP PHASE1:Mm9::chr13:56390692..56390729,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:56390692..56390729,-|id=chr13:56390692..56390729,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,5.01e-10,8;CL:0000333,9.61e-08,10;CL:0000095,9.61e-08,10;CL:0000243,9.61e-08,10;CL:0000123,9.61e-08,10;CL:0000125,9.61e-08,10;CL:0000030,9.61e-08,10;CL:0000339,9.61e-08,10;CL:0002194,1.94e-07,4;CL:0000766,1.94e-07,4;CL:0000234,1.94e-07,4;CL:0000576,1.94e-07,4;CL:0000235,1.94e-07,4;CL:0000864,1.94e-07,4;CL:0002009,1.94e-07,4;CL:0000040,1.94e-07,4;CL:0000559,1.94e-07,4;CL:0000128,5.92e-07,6;CL:0000126,5.92e-07,6;CL:0000127,5.92e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!4.30e-14!50;UBERON:0006238!4.30e-14!50;UBERON:0004121!9.73e-14!102;UBERON:0000924!9.73e-14!102;UBERON:0006601!9.73e-14!102;UBERON:0002616!1.01e-13!49;UBERON:0001049!1.78e-13!52;UBERON:0005068!1.78e-13!52;UBERON:0006241!1.78e-13!52;UBERON:0007135!1.78e-13!52;UBERON:0001017!7.43e-13!73;UBERON:0005743!7.43e-13!73;UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0000033!4.42e-11!63;UBERON:0003080!7.89e-11!40;UBERON:0002780!1.46e-10!39;UBERON:0001890!1.46e-10!39;UBERON:0006240!1.46e-10!39;UBERON:0002020!2.03e-10!34;UBERON:0002346!2.65e-10!71;UBERON:0003075!2.65e-10!71;UBERON:0007284!2.65e-10!71;UBERON:0002791!1.99e-09!29;UBERON:0003528!1.99e-09!29;UBERON:0001893!1.99e-09!29;UBERON:0003056!5.42e-09!49;UBERON:0002619!1.39e-08!17;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10;UBERON:0003102!4.70e-08!23;UBERON:0000956!7.30e-08!21;UBERON:0001869!7.30e-08!21;UBERON:0000203!7.30e-08!21;UBERON:0000153!7.44e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.40e-16,10;UBERON:0000411,8.40e-16,10;UBERON:0001950,8.40e-16,10;UBERON:0004121,2.76e-14,95;UBERON:0000924,2.76e-14,95;UBERON:0006601,2.76e-14,95;UBERON:0002619,2.99e-14,17;UBERON:0000073,3.69e-13,54;UBERON:0001017,4.25e-13,73;UBERON:0001016,1.58e-12,75;UBERON:0002020,1.71e-12,34;UBERON:0000956,1.77e-12,21;UBERON:0001869,1.77e-12,21;UBERON:0000203,1.77e-12,21;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0002102,1.24e-10,7;UBERON:0004710,1.24e-10,7;UBERON:0005419,1.24e-10,7;UBERON:0005417,1.24e-10,7;UBERON:0005729,1.24e-10,7;UBERON:0010371,2.14e-10,73;UBERON:0002780,3.23e-10,39;UBERON:0001890,3.23e-10,39;UBERON:0006240,3.23e-10,39;UBERON:0001049,3.28e-10,52;UBERON:0005068,3.28e-10,52;UBERON:0006241,3.28e-10,52;UBERON:0007135,3.28e-10,52;UBERON:0002616,5.08e-10,46;UBERON:0003080,7.76e-10,40;UBERON:0000955,1.09e-09,47;UBERON:0006238,1.09e-09,47;UBERON:0010708,3.83e-09,8;UBERON:0003102,5.85e-09,22;UBERON:0003056,5.70e-08,49;UBERON:0002346,6.00e-08,64;UBERON:0003075,6.00e-08,64;UBERON:0007284,6.00e-08,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,3.51497892375155,3.88859798148567,1.81982348112971,2.87505128729943,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0.889294796111139,6.74924787961049,11.8663963508037,10.6572017241915,5.39280198933128,5.76327457982332,0.103689612308478,0.135005938331691,0,1.99955689082663,0.662605622854841,0.122490799214954,0.383381884072945,0,2.20231761998777,2.29837208553338,1.84327839907492,0.395658863190582,0.182975287204819,0,2.23346399201105,1.68828783009504,2.13917546887534,1.17851434189467,0.569486723196412,0,0.302904773332736,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.742210695324124,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0,0,0,0,0.220841518460394,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,1.21677024134594,0.767146371990992,1.24672826735736,0.486723789203273,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,1.03481348295606,1.72454394346274,1.51284864134255,4.75068035242662,3.5071317188412,3.61461423993277,3.48252166522167,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0.159454768657487,2.29408640602033,1.55416483679306,1.44649058581512,6.03165135757089,1.63171705145613,1.96705709207614,0.275936746304732,1.12385412991454,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,11.7335854031855,0.21183207086382,0.882113592219848,1.6488625294148,1.29171541356724,0.904693873922338,1.79058516004705,2.1338316966858,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0,0,0.26175594198403,0.518459893167171,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,2.31827512838629,3.94133198447482,1.28206136987086,0.428736758158132,1.00314420807073,3.3885110557024,4.60325236507177,5.72895513439397,2.40594455281163,2.05524755931193,3.7769694869485,4.72515750162264,8.55610286126019,1.81256963593682,2.07104124700728,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0,0.187283014939765,0.384150914429216,0.114870937911227,0.476293691283074,0,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.644613162144895,0.57386499620653,0.441182838239031,0|short_description=p@chr13:56390692..56390729,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:56390692..56390729,- | |||
|description=CAGE_peak_at_chr13:56390692..56390729,- | |||
|id=chr13:56390692..56390729,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.01e-10,8;CL:0000333,9.61e-08,10;CL:0000095,9.61e-08,10;CL:0000243,9.61e-08,10;CL:0000123,9.61e-08,10;CL:0000125,9.61e-08,10;CL:0000030,9.61e-08,10;CL:0000339,9.61e-08,10;CL:0002194,1.94e-07,4;CL:0000766,1.94e-07,4;CL:0000234,1.94e-07,4;CL:0000576,1.94e-07,4;CL:0000235,1.94e-07,4;CL:0000864,1.94e-07,4;CL:0002009,1.94e-07,4;CL:0000040,1.94e-07,4;CL:0000559,1.94e-07,4;CL:0000128,5.92e-07,6;CL:0000126,5.92e-07,6;CL:0000127,5.92e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.30e-14!50;UBERON:0006238!4.30e-14!50;UBERON:0004121!9.73e-14!102;UBERON:0000924!9.73e-14!102;UBERON:0006601!9.73e-14!102;UBERON:0002616!1.01e-13!49;UBERON:0001049!1.78e-13!52;UBERON:0005068!1.78e-13!52;UBERON:0006241!1.78e-13!52;UBERON:0007135!1.78e-13!52;UBERON:0001017!7.43e-13!73;UBERON:0005743!7.43e-13!73;UBERON:0000073!1.39e-12!75;UBERON:0001016!1.39e-12!75;UBERON:0000033!4.42e-11!63;UBERON:0003080!7.89e-11!40;UBERON:0002780!1.46e-10!39;UBERON:0001890!1.46e-10!39;UBERON:0006240!1.46e-10!39;UBERON:0002020!2.03e-10!34;UBERON:0002346!2.65e-10!71;UBERON:0003075!2.65e-10!71;UBERON:0007284!2.65e-10!71;UBERON:0002791!1.99e-09!29;UBERON:0003528!1.99e-09!29;UBERON:0001893!1.99e-09!29;UBERON:0003056!5.42e-09!49;UBERON:0002619!1.39e-08!17;UBERON:0002021!2.39e-08!10;UBERON:0000411!2.39e-08!10;UBERON:0001950!2.39e-08!10;UBERON:0003102!4.70e-08!23;UBERON:0000956!7.30e-08!21;UBERON:0001869!7.30e-08!21;UBERON:0000203!7.30e-08!21;UBERON:0000153!7.44e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.40e-16,10;UBERON:0000411,8.40e-16,10;UBERON:0001950,8.40e-16,10;UBERON:0004121,2.76e-14,95;UBERON:0000924,2.76e-14,95;UBERON:0006601,2.76e-14,95;UBERON:0002619,2.99e-14,17;UBERON:0000073,3.69e-13,54;UBERON:0001017,4.25e-13,73;UBERON:0001016,1.58e-12,75;UBERON:0002020,1.71e-12,34;UBERON:0000956,1.77e-12,21;UBERON:0001869,1.77e-12,21;UBERON:0000203,1.77e-12,21;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0002102,1.24e-10,7;UBERON:0004710,1.24e-10,7;UBERON:0005419,1.24e-10,7;UBERON:0005417,1.24e-10,7;UBERON:0005729,1.24e-10,7;UBERON:0010371,2.14e-10,73;UBERON:0002780,3.23e-10,39;UBERON:0001890,3.23e-10,39;UBERON:0006240,3.23e-10,39;UBERON:0001049,3.28e-10,52;UBERON:0005068,3.28e-10,52;UBERON:0006241,3.28e-10,52;UBERON:0007135,3.28e-10,52;UBERON:0002616,5.08e-10,46;UBERON:0003080,7.76e-10,40;UBERON:0000955,1.09e-09,47;UBERON:0006238,1.09e-09,47;UBERON:0010708,3.83e-09,8;UBERON:0003102,5.85e-09,22;UBERON:0003056,5.70e-08,49;UBERON:0002346,6.00e-08,64;UBERON:0003075,6.00e-08,64;UBERON:0007284,6.00e-08,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,3.51497892375155,3.88859798148567,1.81982348112971,2.87505128729943,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0,0,0.889294796111139,6.74924787961049,11.8663963508037,10.6572017241915,5.39280198933128,5.76327457982332,0.103689612308478,0.135005938331691,0,1.99955689082663,0.662605622854841,0.122490799214954,0.383381884072945,0,2.20231761998777,2.29837208553338,1.84327839907492,0.395658863190582,0.182975287204819,0,2.23346399201105,1.68828783009504,2.13917546887534,1.17851434189467,0.569486723196412,0,0.302904773332736,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.742210695324124,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0.376999773989026,0,0,0,0,0.220841518460394,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,1.21677024134594,0.767146371990992,1.24672826735736,0.486723789203273,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,1.03481348295606,1.72454394346274,1.51284864134255,4.75068035242662,3.5071317188412,3.61461423993277,3.48252166522167,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.632365371242573,0.295220295959204,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0,0.159454768657487,2.29408640602033,1.55416483679306,1.44649058581512,6.03165135757089,1.63171705145613,1.96705709207614,0.275936746304732,1.12385412991454,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,11.7335854031855,0.21183207086382,0.882113592219848,1.6488625294148,1.29171541356724,0.904693873922338,1.79058516004705,2.1338316966858,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0,0,0.26175594198403,0.518459893167171,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,2.31827512838629,3.94133198447482,1.28206136987086,0.428736758158132,1.00314420807073,3.3885110557024,4.60325236507177,5.72895513439397,2.40594455281163,2.05524755931193,3.7769694869485,4.72515750162264,8.55610286126019,1.81256963593682,2.07104124700728,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.64183841918363,0,0.50695859978048,0,0.187283014939765,0.384150914429216,0.114870937911227,0.476293691283074,0,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.263069711437843,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.644613162144895,0.57386499620653,0.441182838239031,0 | |||
|short_description=p@chr13:56390692..56390729,- | |||
}} |
Latest revision as of 04:30, 6 August 2015
Short description: | p@chr13:56390692..56390729, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:56390692..56390729, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.01e-10 | 8 |
migratory neural crest cell | 9.61e-08 | 10 |
neuron associated cell | 9.61e-08 | 10 |
glial cell (sensu Vertebrata) | 9.61e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.61e-08 | 10 |
glial cell | 9.61e-08 | 10 |
glioblast | 9.61e-08 | 10 |
glioblast (sensu Vertebrata) | 9.61e-08 | 10 |
monopoietic cell | 1.94e-07 | 4 |
myeloid leukocyte | 1.94e-07 | 4 |
phagocyte | 1.94e-07 | 4 |
monocyte | 1.94e-07 | 4 |
macrophage | 1.94e-07 | 4 |
tissue-resident macrophage | 1.94e-07 | 4 |
macrophage dendritic cell progenitor | 1.94e-07 | 4 |
monoblast | 1.94e-07 | 4 |
promonocyte | 1.94e-07 | 4 |
oligodendrocyte | 5.92e-07 | 6 |
macroglial cell | 5.92e-07 | 6 |
astrocyte | 5.92e-07 | 6 |