FFCP PHASE1:Mm9::chr5:121459539..121459586,-: Difference between revisions
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{{FFCP|EntrezGene=19894|HGNC=|MCL_coexpression_id=1|UniProt=P47708|association_with_transcript=-12bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end|description=CAGE_peak_1_at_Rph3a_5end|id=chr5:121459539..121459586,-|ontology_enrichment_celltype=CL:0000117!1.76e-16!23;CL:0000337!1.76e-16!23;CL:0000540!7.57e-12!33;CL:0000047!7.57e-12!33;CL:0000031!7.57e-12!33;CL:0000404!7.57e-12!33;CL:0000221!7.74e-09!44;CL:0000133!7.74e-09!44;CL:0002319!1.93e-08!43;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-19,23;CL:0000337,1.60e-19,23;CL:0000540,3.43e-12,33;CL:0000047,3.43e-12,33;CL:0000031,3.43e-12,33;CL:0000404,3.43e-12,33;CL:0000393,4.71e-09,39;CL:0000211,4.71e-09,39;CL:0000221,6.31e-08,44;CL:0000133,6.31e-08,44;CL:0002319,1.69e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.87e-32!71;UBERON:0003075!2.87e-32!71;UBERON:0007284!2.87e-32!71;UBERON:0000033!2.41e-31!63;UBERON:0001049!3.28e-29!52;UBERON:0005068!3.28e-29!52;UBERON:0006241!3.28e-29!52;UBERON:0007135!3.28e-29!52;UBERON:0004121!3.29e-29!102;UBERON:0000924!3.29e-29!102;UBERON:0006601!3.29e-29!102;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!2.59e-28!73;UBERON:0005743!2.59e-28!73;UBERON:0000955!6.66e-28!50;UBERON:0006238!6.66e-28!50;UBERON:0002616!2.70e-27!49;UBERON:0003056!1.12e-26!49;UBERON:0003080!8.49e-23!40;UBERON:0002780!6.57e-22!39;UBERON:0001890!6.57e-22!39;UBERON:0006240!6.57e-22!39;UBERON:0002020!3.89e-21!34;UBERON:0002791!1.27e-17!29;UBERON:0003528!1.27e-17!29;UBERON:0001893!1.27e-17!29;UBERON:0007811!1.57e-16!86;UBERON:0000153!2.93e-13!94;UBERON:0000956!7.03e-12!21;UBERON:0001869!7.03e-12!21;UBERON:0000203!7.03e-12!21;UBERON:0002619!8.75e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10;UBERON:0002420!4.61e-07!8;UBERON:0007245!4.61e-07!8;UBERON:0010009!4.61e-07!8;UBERON:0010011!4.61e-07!8;UBERON:0000454!4.61e-07!8;UBERON:0003076!7.29e-07!12;UBERON:0003057!7.29e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-35,64;UBERON:0003075,1.13e-35,64;UBERON:0007284,1.13e-35,64;UBERON:0000073,1.76e-35,54;UBERON:0001049,3.22e-33,52;UBERON:0005068,3.22e-33,52;UBERON:0006241,3.22e-33,52;UBERON:0007135,3.22e-33,52;UBERON:0010371,1.66e-31,73;UBERON:0003056,4.88e-30,49;UBERON:0001017,7.24e-30,73;UBERON:0004121,1.44e-28,95;UBERON:0000924,1.44e-28,95;UBERON:0006601,1.44e-28,95;UBERON:0001016,1.58e-28,75;UBERON:0000955,2.62e-28,47;UBERON:0006238,2.62e-28,47;UBERON:0002616,1.34e-27,46;UBERON:0002020,1.77e-25,34;UBERON:0003080,3.38e-25,40;UBERON:0002780,3.79e-24,39;UBERON:0001890,3.79e-24,39;UBERON:0006240,3.79e-24,39;UBERON:0010314,2.30e-23,92;UBERON:0003528,3.09e-21,29;UBERON:0002791,3.09e-21,29;UBERON:0001893,3.09e-21,29;UBERON:0000956,2.70e-14,21;UBERON:0001869,2.70e-14,21;UBERON:0000203,2.70e-14,21;UBERON:0002619,9.02e-12,17;UBERON:0002021,1.42e-10,10;UBERON:0000411,1.42e-10,10;UBERON:0001950,1.42e-10,10;UBERON:0003076,3.01e-08,12;UBERON:0003057,3.01e-08,12;UBERON:0002420,3.46e-08,8;UBERON:0007245,3.46e-08,8;UBERON:0010009,3.46e-08,8;UBERON:0010011,3.46e-08,8;UBERON:0000454,3.46e-08,8|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9714181036102,25.9205579843296,17.1134478946668,0,0,0,0,0,0,0.384218305321555,4.97710139080693,5.67024940993101,4.6271491497304,55.7019419587417,51.9041071236292,12.4940615199253,12.555756703389,22.9804696652505,117.823992669346,120.409159814332,149.151943791812,17.013331117195,18.5719916512892,25.5247551572812,142.662512489706,78.2240027944035,98.0964750727121,40.0694876244188,40.148813985347,16.4031512326265,0.681535739998656,0.226714680320357,0,0,0,0,0,0,3.37066608316204,0,0,0,4.92951969218382,0,0,0,0,0,0,2.51204535381932,0,2.9688427812965,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,0.587943535678524,1.88499886994513,0,0.144599356919912,0,0,0,0,0,95.4465398257644,126.505810915327,0,0,0,0,104.104494386352,48.4950638987744,27.1413400563787,87.9551060172919,67.5088807352073,90.5955874279682,68.6280542776615,0,0,0,6.31325567659422,0,4.82794419310293,9.00310649026746,12.0563854268572,15.6483948048054,12.5551445879153,12.3686276418842,20.4375662883822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.1384343120588,10.5991750750663,0,0.264450566663544,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,1.50801125280162,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.779935708915,130.573818863714,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,1.07168517515796,3.90148514013002,8.20496560969525,6.91105886528908,11.8741330154694,0,0,0,0,0,0,0,0,0.874442509889552,177.452014024058,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9104324190896,66.2868340570335,53.8521782633033,57.5708160851353,95.9115527678899,90.6472676867641,78.3026100268895,75.653962141669,92.4410514327777,103.552062350364,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,3.14419743941973,5.69914876195044,2.889207461421,4.32673620201678,1.28367683836726,3.03236654116557,5.0695859978048,4.33840585187975,3.37109426891577,2.56100609619477,2.92920891673628,1.90517476513229,2.31768651889711,2.89363830695558,0.412085900803307,3.97437084362873,3.77156177623957,2.66213709239006,4.05341522910446,2.47088908274958,2.4468438907986,2.70766745253365,3.29270351170991,3.6829759601298,3.80251518768413,5.61142271657738,3.2031454893527,2.85662998889134,2.04615521584845,2.63392630016142,3.2794123866794,6.24526444844865,2.10538447600868,2.79332370262788,3.06061331310149,1.76473135295612,2.08681052058379|short_description=p1@Rph3a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19894 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P47708 | |||
|association_with_transcript=-12bp_to_ENSMUST00000079204,NM_011286,uc008zil.1_5end | |||
|cluster_id=chr5:121459539..121459586,- | |||
|description=CAGE_peak_1_at_Rph3a_5end | |||
|id=chr5:121459539..121459586,- | |||
|ontology_enrichment_celltype=CL:0000117!1.76e-16!23;CL:0000337!1.76e-16!23;CL:0000540!7.57e-12!33;CL:0000047!7.57e-12!33;CL:0000031!7.57e-12!33;CL:0000404!7.57e-12!33;CL:0000221!7.74e-09!44;CL:0000133!7.74e-09!44;CL:0002319!1.93e-08!43;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.60e-19,23;CL:0000337,1.60e-19,23;CL:0000540,3.43e-12,33;CL:0000047,3.43e-12,33;CL:0000031,3.43e-12,33;CL:0000404,3.43e-12,33;CL:0000393,4.71e-09,39;CL:0000211,4.71e-09,39;CL:0000221,6.31e-08,44;CL:0000133,6.31e-08,44;CL:0002319,1.69e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.87e-32!71;UBERON:0003075!2.87e-32!71;UBERON:0007284!2.87e-32!71;UBERON:0000033!2.41e-31!63;UBERON:0001049!3.28e-29!52;UBERON:0005068!3.28e-29!52;UBERON:0006241!3.28e-29!52;UBERON:0007135!3.28e-29!52;UBERON:0004121!3.29e-29!102;UBERON:0000924!3.29e-29!102;UBERON:0006601!3.29e-29!102;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!2.59e-28!73;UBERON:0005743!2.59e-28!73;UBERON:0000955!6.66e-28!50;UBERON:0006238!6.66e-28!50;UBERON:0002616!2.70e-27!49;UBERON:0003056!1.12e-26!49;UBERON:0003080!8.49e-23!40;UBERON:0002780!6.57e-22!39;UBERON:0001890!6.57e-22!39;UBERON:0006240!6.57e-22!39;UBERON:0002020!3.89e-21!34;UBERON:0002791!1.27e-17!29;UBERON:0003528!1.27e-17!29;UBERON:0001893!1.27e-17!29;UBERON:0007811!1.57e-16!86;UBERON:0000153!2.93e-13!94;UBERON:0000956!7.03e-12!21;UBERON:0001869!7.03e-12!21;UBERON:0000203!7.03e-12!21;UBERON:0002619!8.75e-10!17;UBERON:0002021!4.76e-09!10;UBERON:0000411!4.76e-09!10;UBERON:0001950!4.76e-09!10;UBERON:0002420!4.61e-07!8;UBERON:0007245!4.61e-07!8;UBERON:0010009!4.61e-07!8;UBERON:0010011!4.61e-07!8;UBERON:0000454!4.61e-07!8;UBERON:0003076!7.29e-07!12;UBERON:0003057!7.29e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-35,64;UBERON:0003075,1.13e-35,64;UBERON:0007284,1.13e-35,64;UBERON:0000073,1.76e-35,54;UBERON:0001049,3.22e-33,52;UBERON:0005068,3.22e-33,52;UBERON:0006241,3.22e-33,52;UBERON:0007135,3.22e-33,52;UBERON:0010371,1.66e-31,73;UBERON:0003056,4.88e-30,49;UBERON:0001017,7.24e-30,73;UBERON:0004121,1.44e-28,95;UBERON:0000924,1.44e-28,95;UBERON:0006601,1.44e-28,95;UBERON:0001016,1.58e-28,75;UBERON:0000955,2.62e-28,47;UBERON:0006238,2.62e-28,47;UBERON:0002616,1.34e-27,46;UBERON:0002020,1.77e-25,34;UBERON:0003080,3.38e-25,40;UBERON:0002780,3.79e-24,39;UBERON:0001890,3.79e-24,39;UBERON:0006240,3.79e-24,39;UBERON:0010314,2.30e-23,92;UBERON:0003528,3.09e-21,29;UBERON:0002791,3.09e-21,29;UBERON:0001893,3.09e-21,29;UBERON:0000956,2.70e-14,21;UBERON:0001869,2.70e-14,21;UBERON:0000203,2.70e-14,21;UBERON:0002619,9.02e-12,17;UBERON:0002021,1.42e-10,10;UBERON:0000411,1.42e-10,10;UBERON:0001950,1.42e-10,10;UBERON:0003076,3.01e-08,12;UBERON:0003057,3.01e-08,12;UBERON:0002420,3.46e-08,8;UBERON:0007245,3.46e-08,8;UBERON:0010009,3.46e-08,8;UBERON:0010011,3.46e-08,8;UBERON:0000454,3.46e-08,8 | |||
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9714181036102,25.9205579843296,17.1134478946668,0,0,0,0,0,0,0.384218305321555,4.97710139080693,5.67024940993101,4.6271491497304,55.7019419587417,51.9041071236292,12.4940615199253,12.555756703389,22.9804696652505,117.823992669346,120.409159814332,149.151943791812,17.013331117195,18.5719916512892,25.5247551572812,142.662512489706,78.2240027944035,98.0964750727121,40.0694876244188,40.148813985347,16.4031512326265,0.681535739998656,0.226714680320357,0,0,0,0,0,0,3.37066608316204,0,0,0,4.92951969218382,0,0,0,0,0,0,2.51204535381932,0,2.9688427812965,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,0.587943535678524,1.88499886994513,0,0.144599356919912,0,0,0,0,0,95.4465398257644,126.505810915327,0,0,0,0,104.104494386352,48.4950638987744,27.1413400563787,87.9551060172919,67.5088807352073,90.5955874279682,68.6280542776615,0,0,0,6.31325567659422,0,4.82794419310293,9.00310649026746,12.0563854268572,15.6483948048054,12.5551445879153,12.3686276418842,20.4375662883822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.1384343120588,10.5991750750663,0,0.264450566663544,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0,0.164698954724011,1.50801125280162,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,145.779935708915,130.573818863714,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,10.2822821254978,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,0.646793418913773,1.07168517515796,3.90148514013002,8.20496560969525,6.91105886528908,11.8741330154694,0,0,0,0,0,0,0,0,0.874442509889552,177.452014024058,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9104324190896,66.2868340570335,53.8521782633033,57.5708160851353,95.9115527678899,90.6472676867641,78.3026100268895,75.653962141669,92.4410514327777,103.552062350364,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,3.14419743941973,5.69914876195044,2.889207461421,4.32673620201678,1.28367683836726,3.03236654116557,5.0695859978048,4.33840585187975,3.37109426891577,2.56100609619477,2.92920891673628,1.90517476513229,2.31768651889711,2.89363830695558,0.412085900803307,3.97437084362873,3.77156177623957,2.66213709239006,4.05341522910446,2.47088908274958,2.4468438907986,2.70766745253365,3.29270351170991,3.6829759601298,3.80251518768413,5.61142271657738,3.2031454893527,2.85662998889134,2.04615521584845,2.63392630016142,3.2794123866794,6.24526444844865,2.10538447600868,2.79332370262788,3.06061331310149,1.76473135295612,2.08681052058379 | |||
|short_description=p1@Rph3a | |||
}} |
Revision as of 04:49, 6 August 2015
Short description: | p1@Rph3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rph3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -12bp_to_ENSMUST00000079204, NM_011286, uc008zil.1_5end |
EntrezGene: | 19894 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.60e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-19 | 23 |
neuron | 3.43e-12 | 33 |
neuronal stem cell | 3.43e-12 | 33 |
neuroblast | 3.43e-12 | 33 |
electrically signaling cell | 3.43e-12 | 33 |
electrically responsive cell | 4.71e-09 | 39 |
electrically active cell | 4.71e-09 | 39 |
ectodermal cell | 6.31e-08 | 44 |
neurectodermal cell | 6.31e-08 | 44 |
neural cell | 1.69e-07 | 43 |