FFCP PHASE1:Mm9::chr13:59871112..59871187,-: Difference between revisions
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{{FFCP|EntrezGene=69046|HGNC=|MCL_coexpression_id=2864|UniProt=Q9D924|association_with_transcript=0bp_to_ENSMUST00000057115,ENSMUST00000160628,NM_026921,uc007qvd.1_5end|description=CAGE_peak_1_at_Isca1_5end|id=chr13:59871112..59871187,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.82e-15!114;UBERON:0004111!2.48e-14!122;UBERON:0000955!1.69e-08!50;UBERON:0006238!1.69e-08!50;UBERON:0001049!2.68e-08!52;UBERON:0005068!2.68e-08!52;UBERON:0006241!2.68e-08!52;UBERON:0007135!2.68e-08!52;UBERON:0002616!3.62e-08!49;UBERON:0003914!1.81e-07!47;UBERON:0002020!3.70e-07!34;UBERON:0004872!4.88e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.82e-15,114;UBERON:0004111,2.48e-14,122;UBERON:0010314,1.04e-09,92;UBERON:0000073,4.41e-09,54;UBERON:0001049,2.68e-08,52;UBERON:0005068,2.68e-08,52;UBERON:0006241,2.68e-08,52;UBERON:0007135,2.68e-08,52;UBERON:0003914,1.81e-07,47;UBERON:0000955,2.94e-07,47;UBERON:0006238,2.94e-07,47;UBERON:0002020,3.70e-07,34;UBERON:0004872,4.88e-07,33;UBERON:0002616,6.07e-07,46|phase1_expression=8.0074423552397,10.1202868215415,6.82498859084304,8.77146212789807,13.023288978605,4.19698179779725,5.60670337429262,9.29687928779349,7.74337971834167,7.2560003159818,7.19115466547121,9.09402612546835,6.16322627752341,7.25589340077678,32.3116468961193,49.2014899757277,45.4715220783295,9.77932712610537,10.1464680868247,8.06340338416257,26.2783766566806,5.06383851124515,6.00759515019551,10.8794847499517,6.65286915094793,9.18771142584032,11.630573896295,10.3426191689227,8.7410772949932,6.30075324399827,4.21287970245079,5.71527606113668,3.69038872550742,0,6.93243887403059,11.6364251750945,8.16677425049476,6.27797446105362,5.4693474116666,7.32933241563318,9.99993529652724,4.09827290975067,3.39857247121808,16.7442767907518,13.4831318521954,8.25960384727567,9.38869613217647,5.01457859675027,12.0827400503959,8.55491555926847,8.67915814077248,8.62515386189829,12.080347636157,5.07753499407941,7.39406358113421,9.26133969729409,11.747871037489,13.4074743992135,18.8154308599426,23.8045940672415,24.0855933332348,6.77689064138264,7.11435836888911,1.7997994345628,4.94433181283487,4.9733608046227,5.99200221036809,5.76327457982332,9.64313394468842,10.6654691282036,12.1988477583802,18.852964970651,20.3199057675484,14.6988959057945,12.6516021744072,9.19218786610021,44.0463523997555,34.0925192687451,28.2636021191488,18.3321939944969,13.8146341839639,17.1901412283731,38.806436861192,31.5147061617741,26.8924916087186,22.9810296669461,15.6608848879013,17.5215479075783,7.64834552665159,7.85944225110569,11.3047150593654,6.88339101585109,32.638624017972,18.3499085156858,18.1937396885347,18.3691023709908,29.3528838075361,13.2935651610885,11.950156211732,10.6001872353102,8.02807492727079,11.5493829672886,7.64415719119937,14.2213340630666,3.68034769719064,4.30711771307668,4.04419556011827,15.4148237620731,9.32176381129818,12.0238132642508,10.9295755862666,15.5277393939192,19.3717017695089,12.6607018064203,11.8764594207062,18.975655290781,23.7307169024999,48.4407845681704,44.2305275974937,19.0884882937943,27.8260313260096,31.5168914537894,13.0474232852686,30.4492028892009,30.7886659015779,12.2619386500124,5.03223522924865,5.99902730993408,6.60765180779936,50.0300735612108,43.9200578705881,19.476424577494,35.1125126788398,36.3115949409069,31.7915708176127,32.123770087416,9.77657892963036,24.7569871514085,16.4269792981889,19.1502088856691,9.62891277924007,9.65588838620586,11.7040384373477,11.6042709733501,8.77670839052129,10.7615525039274,8.24575176125614,25.3529303324235,9.7005596819779,8.88798576788751,8.79755620819744,10.5213951565236,10.0097009721215,5.92028683087683,10.906453229621,5.57295947091781,4.91549231119264,5.40430604940902,7.38825098428541,13.4631752148076,19.7001890384121,18.9065164534066,17.2823656977203,25.5793501271625,26.0711420779669,31.1595485965547,30.5831677595566,25.5716099784101,29.2916532845995,36.6093444896382,45.0742581074958,60.9653947563636,67.4018853943525,50.0589941976187,30.9126224389267,13.8921226712034,12.5559137533843,10.5780226665418,6.82522401712749,9.28946687441754,5.7990357594942,11.4959609035305,8.00560957841533,12.7451169495415,7.59246498471219,9.71723832871664,12.8180956488137,11.5394753783867,9.55324026883689,9.88701349519644,13.1844210423563,12.1476176685164,7.58671603812327,10.3966146474853,9.01661885384643,15.0701982605533,14.7403890247396,9.74887896475428,11.3825766823663,19.4845395333075,20.7238320750615,20.6073263749407,17.7871576252289,18.3529616287703,17.8868685553015,21.1370385641763,25.1546550521744,22.1882986972223,31.3189797691146,23.3033871335157,18.8076863059041,15.1008777253445,12.9391385874619,10.7920874823866,12.4815069245824,15.1547326768267,14.5311904952749,17.3679667690812,14.2259956428286,7.76914788258988,8.31121379854332,8.82674446030978,11.2651319178481,14.0705256251125,24.5184950112594,11.7080188714679,15.6058792665129,12.8449519996289,11.00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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69046 | |||
|HGNC= | |||
|MCL_coexpression_id=2864 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D924 | |||
|association_with_transcript=0bp_to_ENSMUST00000057115,ENSMUST00000160628,NM_026921,uc007qvd.1_5end | |||
|cluster_id=chr13:59871112..59871187,- | |||
|description=CAGE_peak_1_at_Isca1_5end | |||
|id=chr13:59871112..59871187,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.82e-15!114;UBERON:0004111!2.48e-14!122;UBERON:0000955!1.69e-08!50;UBERON:0006238!1.69e-08!50;UBERON:0001049!2.68e-08!52;UBERON:0005068!2.68e-08!52;UBERON:0006241!2.68e-08!52;UBERON:0007135!2.68e-08!52;UBERON:0002616!3.62e-08!49;UBERON:0003914!1.81e-07!47;UBERON:0002020!3.70e-07!34;UBERON:0004872!4.88e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.82e-15,114;UBERON:0004111,2.48e-14,122;UBERON:0010314,1.04e-09,92;UBERON:0000073,4.41e-09,54;UBERON:0001049,2.68e-08,52;UBERON:0005068,2.68e-08,52;UBERON:0006241,2.68e-08,52;UBERON:0007135,2.68e-08,52;UBERON:0003914,1.81e-07,47;UBERON:0000955,2.94e-07,47;UBERON:0006238,2.94e-07,47;UBERON:0002020,3.70e-07,34;UBERON:0004872,4.88e-07,33;UBERON:0002616,6.07e-07,46 | |||
|phase1_expression=8.0074423552397,10.1202868215415,6.82498859084304,8.77146212789807,13.023288978605,4.19698179779725,5.60670337429262,9.29687928779349,7.74337971834167,7.2560003159818,7.19115466547121,9.09402612546835,6.16322627752341,7.25589340077678,32.3116468961193,49.2014899757277,45.4715220783295,9.77932712610537,10.1464680868247,8.06340338416257,26.2783766566806,5.06383851124515,6.00759515019551,10.8794847499517,6.65286915094793,9.18771142584032,11.630573896295,10.3426191689227,8.7410772949932,6.30075324399827,4.21287970245079,5.71527606113668,3.69038872550742,0,6.93243887403059,11.6364251750945,8.16677425049476,6.27797446105362,5.4693474116666,7.32933241563318,9.99993529652724,4.09827290975067,3.39857247121808,16.7442767907518,13.4831318521954,8.25960384727567,9.38869613217647,5.01457859675027,12.0827400503959,8.55491555926847,8.67915814077248,8.62515386189829,12.080347636157,5.07753499407941,7.39406358113421,9.26133969729409,11.747871037489,13.4074743992135,18.8154308599426,23.8045940672415,24.0855933332348,6.77689064138264,7.11435836888911,1.7997994345628,4.94433181283487,4.9733608046227,5.99200221036809,5.76327457982332,9.64313394468842,10.6654691282036,12.1988477583802,18.852964970651,20.3199057675484,14.6988959057945,12.6516021744072,9.19218786610021,44.0463523997555,34.0925192687451,28.2636021191488,18.3321939944969,13.8146341839639,17.1901412283731,38.806436861192,31.5147061617741,26.8924916087186,22.9810296669461,15.6608848879013,17.5215479075783,7.64834552665159,7.85944225110569,11.3047150593654,6.88339101585109,32.638624017972,18.3499085156858,18.1937396885347,18.3691023709908,29.3528838075361,13.2935651610885,11.950156211732,10.6001872353102,8.02807492727079,11.5493829672886,7.64415719119937,14.2213340630666,3.68034769719064,4.30711771307668,4.04419556011827,15.4148237620731,9.32176381129818,12.0238132642508,10.9295755862666,15.5277393939192,19.3717017695089,12.6607018064203,11.8764594207062,18.975655290781,23.7307169024999,48.4407845681704,44.2305275974937,19.0884882937943,27.8260313260096,31.5168914537894,13.0474232852686,30.4492028892009,30.7886659015779,12.2619386500124,5.03223522924865,5.99902730993408,6.60765180779936,50.0300735612108,43.9200578705881,19.476424577494,35.1125126788398,36.3115949409069,31.7915708176127,32.123770087416,9.77657892963036,24.7569871514085,16.4269792981889,19.1502088856691,9.62891277924007,9.65588838620586,11.7040384373477,11.6042709733501,8.77670839052129,10.7615525039274,8.24575176125614,25.3529303324235,9.7005596819779,8.88798576788751,8.79755620819744,10.5213951565236,10.0097009721215,5.92028683087683,10.906453229621,5.57295947091781,4.91549231119264,5.40430604940902,7.38825098428541,13.4631752148076,19.7001890384121,18.9065164534066,17.2823656977203,25.5793501271625,26.0711420779669,31.1595485965547,30.5831677595566,25.5716099784101,29.2916532845995,36.6093444896382,45.0742581074958,60.9653947563636,67.4018853943525,50.0589941976187,30.9126224389267,13.8921226712034,12.5559137533843,10.5780226665418,6.82522401712749,9.28946687441754,5.7990357594942,11.4959609035305,8.00560957841533,12.7451169495415,7.59246498471219,9.71723832871664,12.8180956488137,11.5394753783867,9.55324026883689,9.88701349519644,13.1844210423563,12.1476176685164,7.58671603812327,10.3966146474853,9.01661885384643,15.0701982605533,14.7403890247396,9.74887896475428,11.3825766823663,19.4845395333075,20.7238320750615,20.6073263749407,17.7871576252289,18.3529616287703,17.8868685553015,21.1370385641763,25.1546550521744,22.1882986972223,31.3189797691146,23.3033871335157,18.8076863059041,15.1008777253445,12.9391385874619,10.7920874823866,12.4815069245824,15.1547326768267,14.5311904952749,17.3679667690812,14.2259956428286,7.76914788258988,8.31121379854332,8.82674446030978,11.2651319178481,14.0705256251125,24.5184950112594,11.7080188714679,15.6058792665129,12.8449519996289,11.0023790373666,24.415633892645,22.1036776788346,23.4331474902049,7.53956419696361,8.70249094109935,18.1952781017043,11.5893433447988,43.188108706716,39.6175500681647,10.9836413402373,62.6127899466845,8.51872192423893,7.80877488593277,7.10897212518236,6.93009514062401,6.23836287430704,5.37845408498782,6.47697122679831,7.3063964477828,8.69633111482352,25.0630626809009,11.2132667314532,11.9303954457061,9.12166972380026,9.73323725537959,14.6019652173959,10.1967867185092,14.511530734308,18.483297816078,12.993283286754,11.0676653259814,9.56184684722418,10.5424781548477,12.1209108650805,8.53299246426703,23.1920938864997,20.6271086496374,22.8094535855038,10.443543453816,12.5477923269272,9.21649250635847,12.2364761213169,13.5560301377574,14.1512157717824,8.22055362609418,16.6616912725234,18.85305430688,12.1290618930229,10.7176064411962,12.1098320021929,9.58975506357678,9.31104283224465,5.74493149107714,12.2421951384537,45.0583483885539,24.4345359540929,13.002372681683,12.5932278611404,38.2387967719523,33.7634742470932,44.8405219484784,11.5585332395822,12.5956307091292,11.3323978519628,17.184071124272,6.16855187483214,8.7427370864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| |||
|short_description=p1@Isca1 | |||
}} |
Revision as of 05:27, 6 August 2015
Short description: | p1@Isca1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Isca1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2864 |
Association with transcript: | 0bp_to_ENSMUST00000057115, ENSMUST00000160628, NM_026921, uc007qvd.1_5end |
EntrezGene: | 69046 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 1.82e-15 | 114 |
anatomical conduit | 2.48e-14 | 122 |
structure with developmental contribution from neural crest | 1.04e-09 | 92 |
regional part of nervous system | 4.41e-09 | 54 |
neural tube | 2.68e-08 | 52 |
neural rod | 2.68e-08 | 52 |
future spinal cord | 2.68e-08 | 52 |
neural keel | 2.68e-08 | 52 |
epithelial tube | 1.81e-07 | 47 |
brain | 2.94e-07 | 47 |
future brain | 2.94e-07 | 47 |
gray matter | 3.70e-07 | 34 |
splanchnic layer of lateral plate mesoderm | 4.88e-07 | 33 |
regional part of brain | 6.07e-07 | 46 |