FFCP PHASE1:Mm9::chr3:17689956..17689972,+: Difference between revisions
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{{FFCP|EntrezGene=70441|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=35bp_to_NR_033490,uc008orj.2_5end|description=CAGE_peak_4_at_2610100L16Rik_5end|id=chr3:17689956..17689972,+|ontology_enrichment_celltype=CL:0000117!6.29e-24!23;CL:0000337!6.29e-24!23;CL:0000540!5.26e-14!33;CL:0000047!5.26e-14!33;CL:0000031!5.26e-14!33;CL:0000404!5.26e-14!33;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002319!6.90e-09!43;CL:0000221!1.63e-08!44;CL:0000133!1.63e-08!44;CL:0002609!9.48e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-34,23;CL:0000337,3.35e-34,23;CL:0000540,7.18e-22,33;CL:0000047,7.18e-22,33;CL:0000031,7.18e-22,33;CL:0000404,7.18e-22,33;CL:0000393,1.57e-17,39;CL:0000211,1.57e-17,39;CL:0002319,2.56e-15,43;CL:0000221,7.88e-15,44;CL:0000133,7.88e-15,44;CL:0002609,2.34e-11,6;CL:0002321,3.75e-07,70;CL:0000120,5.09e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.36e-29!63;UBERON:0003056!2.87e-29!49;UBERON:0002020!3.03e-29!34;UBERON:0001049!3.00e-28!52;UBERON:0005068!3.00e-28!52;UBERON:0006241!3.00e-28!52;UBERON:0007135!3.00e-28!52;UBERON:0002346!6.60e-28!71;UBERON:0003075!6.60e-28!71;UBERON:0007284!6.60e-28!71;UBERON:0000955!1.72e-25!50;UBERON:0006238!1.72e-25!50;UBERON:0001017!3.73e-25!73;UBERON:0005743!3.73e-25!73;UBERON:0002616!1.22e-24!49;UBERON:0000073!5.05e-24!75;UBERON:0001016!5.05e-24!75;UBERON:0002791!8.99e-24!29;UBERON:0003528!8.99e-24!29;UBERON:0001893!8.99e-24!29;UBERON:0003080!1.94e-22!40;UBERON:0004121!6.02e-22!102;UBERON:0000924!6.02e-22!102;UBERON:0006601!6.02e-22!102;UBERON:0002780!2.08e-21!39;UBERON:0001890!2.08e-21!39;UBERON:0006240!2.08e-21!39;UBERON:0007811!4.59e-17!86;UBERON:0000956!1.61e-16!21;UBERON:0001869!1.61e-16!21;UBERON:0000203!1.61e-16!21;UBERON:0000153!2.84e-14!94;UBERON:0002619!1.54e-12!17;UBERON:0002021!2.01e-10!10;UBERON:0000411!2.01e-10!10;UBERON:0001950!2.01e-10!10;UBERON:0002420!2.20e-08!8;UBERON:0007245!2.20e-08!8;UBERON:0010009!2.20e-08!8;UBERON:0010011!2.20e-08!8;UBERON:0000454!2.20e-08!8;UBERON:0000970!1.65e-07!9;UBERON:0000019!1.65e-07!9;UBERON:0000047!1.65e-07!9;UBERON:0004088!1.65e-07!9;UBERON:0002104!1.65e-07!9;UBERON:0001456!1.65e-07!9;UBERON:0003072!1.65e-07!9;UBERON:0003071!1.65e-07!9;UBERON:0004128!1.65e-07!9;UBERON:0002240!2.61e-07!6;UBERON:0005174!2.61e-07!6;UBERON:0001137!2.61e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.48e-38,34;UBERON:0000073,1.87e-36,54;UBERON:0002346,3.13e-35,64;UBERON:0003075,3.13e-35,64;UBERON:0007284,3.13e-35,64;UBERON:0001049,5.89e-34,52;UBERON:0005068,5.89e-34,52;UBERON:0006241,5.89e-34,52;UBERON:0007135,5.89e-34,52;UBERON:0001017,8.23e-34,73;UBERON:0001016,1.28e-32,75;UBERON:0004121,3.70e-31,95;UBERON:0000924,3.70e-31,95;UBERON:0006601,3.70e-31,95;UBERON:0003528,3.62e-30,29;UBERON:0002791,3.62e-30,29;UBERON:0001893,3.62e-30,29;UBERON:0010371,1.35e-29,73;UBERON:0003056,4.11e-29,49;UBERON:0000955,1.74e-26,47;UBERON:0006238,1.74e-26,47;UBERON:0003080,6.48e-26,40;UBERON:0002616,2.80e-25,46;UBERON:0002780,2.01e-24,39;UBERON:0001890,2.01e-24,39;UBERON:0006240,2.01e-24,39;UBERON:0000956,1.54e-23,21;UBERON:0001869,1.54e-23,21;UBERON:0000203,1.54e-23,21;UBERON:0010314,2.51e-21,92;UBERON:0002619,2.53e-17,17;UBERON:0002021,1.41e-15,10;UBERON:0000411,1.41e-15,10;UBERON:0001950,1.41e-15,10;UBERON:0002240,1.16e-10,6;UBERON:0005174,1.16e-10,6;UBERON:0001137,1.16e-10,6;UBERON:0000025,2.03e-10,114;UBERON:0001948,1.34e-09,5;UBERON:0002315,1.34e-09,5;UBERON:0004111,3.73e-09,122;UBERON:0003076,3.02e-08,12;UBERON:0003057,3.02e-08,12;UBERON:0002420,1.03e-07,8;UBERON:0007245,1.03e-07,8;UBERON:0010009,1.03e-07,8;UBERON:0010011,1.03e-07,8;UBERON:0000454,1.03e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,7.40587370980846,7.60597684207415,0,0,0,0,0,0,0,2.90330914463737,4.86021377994086,3.36519938162211,4.85606673486466,4.19650227808066,4.77714116938321,3.06705507258356,10.1114066527102,1.10115880999389,2.55374676170375,1.22885226604995,5.53922408466814,4.66586982372289,3.12548022334056,2.51264699101243,1.12552522006336,0.916789486660861,2.94628585473668,3.27454865837937,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,3.74476598512057,0.915001205637253,6.78533501409468,3.12883776346098,1.27857728665165,1.45451631191692,1.29793010454206,0,0,0,0.631325567659422,0.650602214813519,0.689706313300419,0.540186389416048,1.50704817835715,2.78949646520444,2.69038812598185,2.52994656311268,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,3.43737308063638,4.29632955859219,1.37016503954128,2.2661816921691,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,0.726511433089237,2.39414924040619,1.19513524027894,0.243106717068294,0.419226325255965,0.735374033800057,0.222246727801615,0,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.842773567228942,0.320125762024346,0.574354689556133,0,0.695305955669133,0.192909220463705,0.824171801606613,0.588795680537589,1.37147700954166,1.4198064492747,0.476872379894642,1.74415699958794,0.941093804153306,0.846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,1.08455788830176,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p4@2610100L16Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70441 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=35bp_to_NR_033490,uc008orj.2_5end | |||
|cluster_id=chr3:17689956..17689972,+ | |||
|description=CAGE_peak_4_at_2610100L16Rik_5end | |||
|id=chr3:17689956..17689972,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.29e-24!23;CL:0000337!6.29e-24!23;CL:0000540!5.26e-14!33;CL:0000047!5.26e-14!33;CL:0000031!5.26e-14!33;CL:0000404!5.26e-14!33;CL:0000393!1.36e-10!39;CL:0000211!1.36e-10!39;CL:0002319!6.90e-09!43;CL:0000221!1.63e-08!44;CL:0000133!1.63e-08!44;CL:0002609!9.48e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-34,23;CL:0000337,3.35e-34,23;CL:0000540,7.18e-22,33;CL:0000047,7.18e-22,33;CL:0000031,7.18e-22,33;CL:0000404,7.18e-22,33;CL:0000393,1.57e-17,39;CL:0000211,1.57e-17,39;CL:0002319,2.56e-15,43;CL:0000221,7.88e-15,44;CL:0000133,7.88e-15,44;CL:0002609,2.34e-11,6;CL:0002321,3.75e-07,70;CL:0000120,5.09e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.36e-29!63;UBERON:0003056!2.87e-29!49;UBERON:0002020!3.03e-29!34;UBERON:0001049!3.00e-28!52;UBERON:0005068!3.00e-28!52;UBERON:0006241!3.00e-28!52;UBERON:0007135!3.00e-28!52;UBERON:0002346!6.60e-28!71;UBERON:0003075!6.60e-28!71;UBERON:0007284!6.60e-28!71;UBERON:0000955!1.72e-25!50;UBERON:0006238!1.72e-25!50;UBERON:0001017!3.73e-25!73;UBERON:0005743!3.73e-25!73;UBERON:0002616!1.22e-24!49;UBERON:0000073!5.05e-24!75;UBERON:0001016!5.05e-24!75;UBERON:0002791!8.99e-24!29;UBERON:0003528!8.99e-24!29;UBERON:0001893!8.99e-24!29;UBERON:0003080!1.94e-22!40;UBERON:0004121!6.02e-22!102;UBERON:0000924!6.02e-22!102;UBERON:0006601!6.02e-22!102;UBERON:0002780!2.08e-21!39;UBERON:0001890!2.08e-21!39;UBERON:0006240!2.08e-21!39;UBERON:0007811!4.59e-17!86;UBERON:0000956!1.61e-16!21;UBERON:0001869!1.61e-16!21;UBERON:0000203!1.61e-16!21;UBERON:0000153!2.84e-14!94;UBERON:0002619!1.54e-12!17;UBERON:0002021!2.01e-10!10;UBERON:0000411!2.01e-10!10;UBERON:0001950!2.01e-10!10;UBERON:0002420!2.20e-08!8;UBERON:0007245!2.20e-08!8;UBERON:0010009!2.20e-08!8;UBERON:0010011!2.20e-08!8;UBERON:0000454!2.20e-08!8;UBERON:0000970!1.65e-07!9;UBERON:0000019!1.65e-07!9;UBERON:0000047!1.65e-07!9;UBERON:0004088!1.65e-07!9;UBERON:0002104!1.65e-07!9;UBERON:0001456!1.65e-07!9;UBERON:0003072!1.65e-07!9;UBERON:0003071!1.65e-07!9;UBERON:0004128!1.65e-07!9;UBERON:0002240!2.61e-07!6;UBERON:0005174!2.61e-07!6;UBERON:0001137!2.61e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.48e-38,34;UBERON:0000073,1.87e-36,54;UBERON:0002346,3.13e-35,64;UBERON:0003075,3.13e-35,64;UBERON:0007284,3.13e-35,64;UBERON:0001049,5.89e-34,52;UBERON:0005068,5.89e-34,52;UBERON:0006241,5.89e-34,52;UBERON:0007135,5.89e-34,52;UBERON:0001017,8.23e-34,73;UBERON:0001016,1.28e-32,75;UBERON:0004121,3.70e-31,95;UBERON:0000924,3.70e-31,95;UBERON:0006601,3.70e-31,95;UBERON:0003528,3.62e-30,29;UBERON:0002791,3.62e-30,29;UBERON:0001893,3.62e-30,29;UBERON:0010371,1.35e-29,73;UBERON:0003056,4.11e-29,49;UBERON:0000955,1.74e-26,47;UBERON:0006238,1.74e-26,47;UBERON:0003080,6.48e-26,40;UBERON:0002616,2.80e-25,46;UBERON:0002780,2.01e-24,39;UBERON:0001890,2.01e-24,39;UBERON:0006240,2.01e-24,39;UBERON:0000956,1.54e-23,21;UBERON:0001869,1.54e-23,21;UBERON:0000203,1.54e-23,21;UBERON:0010314,2.51e-21,92;UBERON:0002619,2.53e-17,17;UBERON:0002021,1.41e-15,10;UBERON:0000411,1.41e-15,10;UBERON:0001950,1.41e-15,10;UBERON:0002240,1.16e-10,6;UBERON:0005174,1.16e-10,6;UBERON:0001137,1.16e-10,6;UBERON:0000025,2.03e-10,114;UBERON:0001948,1.34e-09,5;UBERON:0002315,1.34e-09,5;UBERON:0004111,3.73e-09,122;UBERON:0003076,3.02e-08,12;UBERON:0003057,3.02e-08,12;UBERON:0002420,1.03e-07,8;UBERON:0007245,1.03e-07,8;UBERON:0010009,1.03e-07,8;UBERON:0010011,1.03e-07,8;UBERON:0000454,1.03e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,7.40587370980846,7.60597684207415,0,0,0,0,0,0,0,2.90330914463737,4.86021377994086,3.36519938162211,4.85606673486466,4.19650227808066,4.77714116938321,3.06705507258356,10.1114066527102,1.10115880999389,2.55374676170375,1.22885226604995,5.53922408466814,4.66586982372289,3.12548022334056,2.51264699101243,1.12552522006336,0.916789486660861,2.94628585473668,3.27454865837937,4.10078780815661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,3.74476598512057,0.915001205637253,6.78533501409468,3.12883776346098,1.27857728665165,1.45451631191692,1.29793010454206,0,0,0,0.631325567659422,0.650602214813519,0.689706313300419,0.540186389416048,1.50704817835715,2.78949646520444,2.69038812598185,2.52994656311268,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,3.43737308063638,4.29632955859219,1.37016503954128,2.2661816921691,2.02506750069542,3.15224842256954,2.71885445390523,1.55328093525546,0.726511433089237,2.39414924040619,1.19513524027894,0.243106717068294,0.419226325255965,0.735374033800057,0.222246727801615,0,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.842773567228942,0.320125762024346,0.574354689556133,0,0.695305955669133,0.192909220463705,0.824171801606613,0.588795680537589,1.37147700954166,1.4198064492747,0.476872379894642,1.74415699958794,0.941093804153306,0.846146078916765,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,1.08455788830176,0.192906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p4@2610100L16Rik | |||
}} |
Revision as of 07:12, 6 August 2015
Short description: | p4@2610100L16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2610100L16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 35bp_to_NR_033490, uc008orj.2_5end |
EntrezGene: | 70441 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-34 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-34 | 23 |
neuron | 7.18e-22 | 33 |
neuronal stem cell | 7.18e-22 | 33 |
neuroblast | 7.18e-22 | 33 |
electrically signaling cell | 7.18e-22 | 33 |
electrically responsive cell | 1.57e-17 | 39 |
electrically active cell | 1.57e-17 | 39 |
neural cell | 2.56e-15 | 43 |
ectodermal cell | 7.88e-15 | 44 |
neurectodermal cell | 7.88e-15 | 44 |
neuron of cerebral cortex | 2.34e-11 | 6 |
embryonic cell | 3.75e-07 | 70 |
granule cell | 5.09e-07 | 3 |