FFCP PHASE1:Mm9::chr3:19088226..19088273,+: Difference between revisions
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{{FFCP|EntrezGene=67472|HGNC=|MCL_coexpression_id=2653|UniProt=F8WI92,D6RFQ6|association_with_transcript=0bp_to_ENSMUST00000029129,ENSMUST00000138777,uc008orr.1,uc008ors.1_5end|description=CAGE_peak_1_at_Mtfr1_5end|id=chr3:19088226..19088273,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!9.57e-16!49;UBERON:0005173!9.57e-16!49;UBERON:0002417!9.57e-16!49;UBERON:0000916!9.57e-16!49;UBERON:0002365!1.57e-13!25;UBERON:0002330!1.57e-13!25;UBERON:0009854!3.34e-12!23;UBERON:0009856!3.34e-12!23;UBERON:0002107!5.15e-12!22;UBERON:0007499!5.15e-12!22;UBERON:0006925!5.15e-12!22;UBERON:0009497!5.15e-12!22;UBERON:0000015!5.15e-12!22;UBERON:0002423!5.15e-12!22;UBERON:0006235!5.15e-12!22;UBERON:0008835!5.15e-12!22;UBERON:0003894!5.15e-12!22;UBERON:0004161!5.15e-12!22;UBERON:0008836!5.15e-12!22;UBERON:0009569!7.70e-12!66;UBERON:0000926!2.36e-11!193;UBERON:0004120!2.36e-11!193;UBERON:0006603!2.36e-11!193;UBERON:0005256!3.33e-11!47;UBERON:0003914!5.51e-11!47;UBERON:0003104!4.08e-10!131;UBERON:0009142!4.08e-10!131;UBERON:0000466!1.03e-08!79;UBERON:0005177!1.05e-08!85;UBERON:0002100!1.14e-08!98;UBERON:0001048!1.77e-07!147;UBERON:0004119!2.71e-07!130;UBERON:0000925!2.71e-07!130;UBERON:0006595!2.71e-07!130;UBERON:0004921!6.03e-07!126;UBERON:0004185!6.03e-07!126;UBERON:0001007!6.82e-07!128;UBERON:0001555!6.82e-07!128;UBERON:0007026!6.82e-07!128;UBERON:0000077!9.19e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.57e-16,49;UBERON:0005173,9.57e-16,49;UBERON:0002417,9.57e-16,49;UBERON:0000916,9.57e-16,49;UBERON:0003104,1.20e-13,61;UBERON:0009142,1.20e-13,61;UBERON:0002365,1.57e-13,25;UBERON:0002330,1.57e-13,25;UBERON:0002100,1.61e-12,90;UBERON:0005177,2.93e-12,79;UBERON:0009854,3.34e-12,23;UBERON:0009856,3.34e-12,23;UBERON:0005256,4.04e-12,45;UBERON:0002107,5.15e-12,22;UBERON:0007499,5.15e-12,22;UBERON:0006925,5.15e-12,22;UBERON:0009497,5.15e-12,22;UBERON:0000015,5.15e-12,22;UBERON:0002423,5.15e-12,22;UBERON:0006235,5.15e-12,22;UBERON:0008835,5.15e-12,22;UBERON:0003894,5.15e-12,22;UBERON:0004161,5.15e-12,22;UBERON:0008836,5.15e-12,22;UBERON:0009569,7.70e-12,66;UBERON:0003914,5.51e-11,47|phase1_expression=20.4990524294136,18.4956966048861,15.4699741392442,30.246421130683,28.0501608769954,17.6273235507484,25.9310031061034,19.1102518693533,41.39188431259,39.3228404220949,30.8192342805909,29.5954709872698,25.1665072998872,23.8657698603863,77.6145745030494,119.257932492607,134.315880600604,15.930839350591,18.2362196695633,16.9755860719212,63.6974243231513,29.8865763114665,37.8739694251456,27.1987118748791,24.5467930741872,20.0981187440257,16.7997178502039,24.1327780608196,42.185199119315,18.3981994724749,29.0466968958449,12.7006134691926,9.22597181376855,15.8481681015439,25.1300909183609,22.275442478038,22.662798545123,32.2269355667419,18.7520482685712,23.5585684788209,50.5879079706672,40.2996836125483,34.9567454182431,32.8590694916257,30.8185870907324,37.6270841931447,10.9534788208725,15.2617609466313,18.0142669842267,17.3042610176112,12.738764367908,0,17.7849562421201,19.5847778343063,23.5265659399725,25.4686841675588,19.7708073557742,27.3306208907044,14.9714181036102,11.1088105647127,7.60597684207415,11.5207140903505,6.22506357277798,9.44894703145469,5.93319817540185,8.5257613793532,5.09320187881288,6.91592949578798,24.4707485048007,16.8757422914613,14.302097371894,2.57085885963423,3.53389665522582,15.0663683034393,15.0477389498631,12.8690630125403,6.60695285996332,8.93811366596314,13.8245879930619,12.924856197559,11.4359554503012,14.0646610050325,11.4465029590566,15.757353080887,9.0150966188318,4.12480019663135,7.97281412474976,8.94717339961443,37.9388228599252,36.1987772911503,19.7107852317141,55.0671281268087,57.7975633651588,68.5423053380028,92.268251277569,112.006721774334,75.5590980308825,35.1086464510799,23.9003124234639,30.0338638333789,23.802537942259,23.0987659345772,5.09610479413291,0,30.9582188646036,27.6162253367857,20.2209778005913,85.752093669014,38.8406825470758,63.2363512416154,25.1553723810897,29.5331513962777,44.5087909704193,50.6428072256812,36.2173217977971,39.0823099035291,47.4614338049998,50.0313774942894,81.3841707793884,32.3533699894818,56.9771117627815,63.0337829075789,37.2783522436244,14.6390398505774,16.127396424636,32.1875889562825,21.5667224110656,16.197373736822,23.8892026897362,12.2828324311955,10.5225138648284,7.413606774659,7.47444576826789,4.09144731728529,15.3763152974074,6.97637431191358,16.5998163076016,47.1502418612253,44.7319282427604,62.0803474865098,30.8385449821608,28.7377630541841,33.8516804034057,27.5789816639359,22.0438257250302,28.5693596235215,24.549851834649,63.1236224603198,38.5866707349788,34.7955187508787,29.5597888595434,27.3994665534469,22.5218271872734,31.6909471535172,27.1632420058485,19.1072896145753,19.6619692447706,17.2423097766859,20.1756084570871,27.7548535197573,29.7848096175992,28.4498057108403,30.7768156260773,25.3825858954151,25.608340739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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67472 | |||
|HGNC= | |||
|MCL_coexpression_id=2653 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WI92,uniprot:D6RFQ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000029129,ENSMUST00000138777,uc008orr.1,uc008ors.1_5end | |||
|cluster_id=chr3:19088226..19088273,+ | |||
|description=CAGE_peak_1_at_Mtfr1_5end | |||
|id=chr3:19088226..19088273,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!9.57e-16!49;UBERON:0005173!9.57e-16!49;UBERON:0002417!9.57e-16!49;UBERON:0000916!9.57e-16!49;UBERON:0002365!1.57e-13!25;UBERON:0002330!1.57e-13!25;UBERON:0009854!3.34e-12!23;UBERON:0009856!3.34e-12!23;UBERON:0002107!5.15e-12!22;UBERON:0007499!5.15e-12!22;UBERON:0006925!5.15e-12!22;UBERON:0009497!5.15e-12!22;UBERON:0000015!5.15e-12!22;UBERON:0002423!5.15e-12!22;UBERON:0006235!5.15e-12!22;UBERON:0008835!5.15e-12!22;UBERON:0003894!5.15e-12!22;UBERON:0004161!5.15e-12!22;UBERON:0008836!5.15e-12!22;UBERON:0009569!7.70e-12!66;UBERON:0000926!2.36e-11!193;UBERON:0004120!2.36e-11!193;UBERON:0006603!2.36e-11!193;UBERON:0005256!3.33e-11!47;UBERON:0003914!5.51e-11!47;UBERON:0003104!4.08e-10!131;UBERON:0009142!4.08e-10!131;UBERON:0000466!1.03e-08!79;UBERON:0005177!1.05e-08!85;UBERON:0002100!1.14e-08!98;UBERON:0001048!1.77e-07!147;UBERON:0004119!2.71e-07!130;UBERON:0000925!2.71e-07!130;UBERON:0006595!2.71e-07!130;UBERON:0004921!6.03e-07!126;UBERON:0004185!6.03e-07!126;UBERON:0001007!6.82e-07!128;UBERON:0001555!6.82e-07!128;UBERON:0007026!6.82e-07!128;UBERON:0000077!9.19e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.57e-16,49;UBERON:0005173,9.57e-16,49;UBERON:0002417,9.57e-16,49;UBERON:0000916,9.57e-16,49;UBERON:0003104,1.20e-13,61;UBERON:0009142,1.20e-13,61;UBERON:0002365,1.57e-13,25;UBERON:0002330,1.57e-13,25;UBERON:0002100,1.61e-12,90;UBERON:0005177,2.93e-12,79;UBERON:0009854,3.34e-12,23;UBERON:0009856,3.34e-12,23;UBERON:0005256,4.04e-12,45;UBERON:0002107,5.15e-12,22;UBERON:0007499,5.15e-12,22;UBERON:0006925,5.15e-12,22;UBERON:0009497,5.15e-12,22;UBERON:0000015,5.15e-12,22;UBERON:0002423,5.15e-12,22;UBERON:0006235,5.15e-12,22;UBERON:0008835,5.15e-12,22;UBERON:0003894,5.15e-12,22;UBERON:0004161,5.15e-12,22;UBERON:0008836,5.15e-12,22;UBERON:0009569,7.70e-12,66;UBERON:0003914,5.51e-11,47 | |||
|phase1_expression=20.4990524294136,18.4956966048861,15.4699741392442,30.246421130683,28.0501608769954,17.6273235507484,25.9310031061034,19.1102518693533,41.39188431259,39.3228404220949,30.8192342805909,29.5954709872698,25.1665072998872,23.8657698603863,77.6145745030494,119.257932492607,134.315880600604,15.930839350591,18.2362196695633,16.9755860719212,63.6974243231513,29.8865763114665,37.8739694251456,27.1987118748791,24.5467930741872,20.0981187440257,16.7997178502039,24.1327780608196,42.185199119315,18.3981994724749,29.0466968958449,12.7006134691926,9.22597181376855,15.8481681015439,25.1300909183609,22.275442478038,22.662798545123,32.2269355667419,18.7520482685712,23.5585684788209,50.5879079706672,40.2996836125483,34.9567454182431,32.8590694916257,30.8185870907324,37.6270841931447,10.9534788208725,15.2617609466313,18.0142669842267,17.3042610176112,12.738764367908,0,17.7849562421201,19.5847778343063,23.5265659399725,25.4686841675588,19.7708073557742,27.3306208907044,14.9714181036102,11.1088105647127,7.60597684207415,11.5207140903505,6.22506357277798,9.44894703145469,5.93319817540185,8.5257613793532,5.09320187881288,6.91592949578798,24.4707485048007,16.8757422914613,14.302097371894,2.57085885963423,3.53389665522582,15.0663683034393,15.0477389498631,12.8690630125403,6.60695285996332,8.93811366596314,13.8245879930619,12.924856197559,11.4359554503012,14.0646610050325,11.4465029590566,15.757353080887,9.0150966188318,4.12480019663135,7.97281412474976,8.94717339961443,37.9388228599252,36.1987772911503,19.7107852317141,55.0671281268087,57.7975633651588,68.5423053380028,92.268251277569,112.006721774334,75.5590980308825,35.1086464510799,23.9003124234639,30.0338638333789,23.802537942259,23.0987659345772,5.09610479413291,0,30.9582188646036,27.6162253367857,20.2209778005913,85.752093669014,38.8406825470758,63.2363512416154,25.1553723810897,29.5331513962777,44.5087909704193,50.6428072256812,36.2173217977971,39.0823099035291,47.4614338049998,50.0313774942894,81.3841707793884,32.3533699894818,56.9771117627815,63.0337829075789,37.2783522436244,14.6390398505774,16.127396424636,32.1875889562825,21.5667224110656,16.197373736822,23.8892026897362,12.2828324311955,10.5225138648284,7.413606774659,7.47444576826789,4.09144731728529,15.3763152974074,6.97637431191358,16.5998163076016,47.1502418612253,44.7319282427604,62.0803474865098,30.8385449821608,28.7377630541841,33.8516804034057,27.5789816639359,22.0438257250302,28.5693596235215,24.549851834649,63.1236224603198,38.5866707349788,34.7955187508787,29.5597888595434,27.3994665534469,22.5218271872734,31.6909471535172,27.1632420058485,19.1072896145753,19.6619692447706,17.2423097766859,20.1756084570871,27.7548535197573,29.7848096175992,28.4498057108403,30.7768156260773,25.3825858954151,25.6083407393048,26.2763357567961,26.8273401399619,24.2871912123713,28.7979737348591,36.9376794177964,38.183409296098,34.6493970198038,39.079920521807,36.2357330653004,9.67333763394985,11.6282211988591,52.8670052774077,33.5852219662701,29.4337785738623,30.190767341857,29.3817811814373,31.4626298412414,26.9077433052293,31.1970026824597,32.2679761850268,26.3518327558417,22.6201687920243,23.4768637008558,25.930223586843,25.1669434423182,45.1728524238111,36.4428530055492,46.0892999315988,23.9921876480431,29.3040112750009,20.7724354402221,29.4807780494791,24.1968578621599,34.0844935099747,53.434873568616,64.2124796871223,62.3155677805093,101.090345836718,90.0963570866908,99.2622925321675,115.35426365343,134.293400359189,131.68272922482,97.5217012322838,80.2672223487762,55.4502475570621,77.426318519039,74.7594673942244,49.8668869875795,53.0464044294753,72.4901379708211,82.7022076336015,100.830695964944,26.4197061938245,31.4555743539005,30.6374155711009,22.7458414938752,24.8771663185812,26.2984824183651,28.0891496245496,20.6841666729267,22.8570958953977,21.4820748959312,21.0480294627883,26.2181303545181,25.2120073524208,23.2884984316234,18.0949540727127,19.5806046174735,83.1081621402171,65.3970088742216,15.0917554588524,10.3146284201139,39.3443868904021,34.5885170269991,27.4492150892143,22.2550084249084,21.9731865687455,24.8527549870654,23.8394581268162,25.1938112402061,25.5030742055183,24.2572362066389,13.4397844501818,5.78378369559253,38.3238230062325,15.1355763117167,18.7320003256613,31.0143831188367,65.0451177865818,22.0930378901033,18.7440605318146,26.4047111658257,24.2147552162234,34.4327365697199,20.6742634534577,27.6285634402904,26.3808060004694,40.7687417737203,66.4137234022492,54.661837921539,38.1292358444243,25.3886142584147,20.8267480890235,15.2179294872431,21.1034878034306,15.161349496176,17.9358432456312,12.7875278628132,45.5263113643598,32.1984747713007,53.1473439312458,61.0079135883476,30.1938477921343,41.1937277259305,42.4965544651166,52.3609470186745,33.228815375803,17.2445530869774,115.679586300146,21.8770080041016,52.5952457729981,126.583603107152,123.98166454297,115.7617556425,26.3466566490476,27.8503390124079,26.3961949966449,35.3228128665592,31.1590953677418,29.0746837991394,25.92128179723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| |||
|short_description=p1@Mtfr1 | |||
}} |
Revision as of 07:20, 6 August 2015
Short description: | p1@Mtfr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtfr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2653 |
Association with transcript: | 0bp_to_ENSMUST00000029129, ENSMUST00000138777, uc008orr.1, uc008ors.1_5end |
EntrezGene: | 67472 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 9.57e-16 | 49 |
abdominal segment element | 9.57e-16 | 49 |
abdominal segment of trunk | 9.57e-16 | 49 |
abdomen | 9.57e-16 | 49 |
mesenchyme | 1.20e-13 | 61 |
entire embryonic mesenchyme | 1.20e-13 | 61 |
exocrine gland | 1.57e-13 | 25 |
exocrine system | 1.57e-13 | 25 |
trunk | 1.61e-12 | 90 |
trunk region element | 2.93e-12 | 79 |
digestive tract diverticulum | 3.34e-12 | 23 |
sac | 3.34e-12 | 23 |
trunk mesenchyme | 4.04e-12 | 45 |
liver | 5.15e-12 | 22 |
epithelial sac | 5.15e-12 | 22 |
digestive gland | 5.15e-12 | 22 |
epithelium of foregut-midgut junction | 5.15e-12 | 22 |
anatomical boundary | 5.15e-12 | 22 |
hepatobiliary system | 5.15e-12 | 22 |
foregut-midgut junction | 5.15e-12 | 22 |
hepatic diverticulum | 5.15e-12 | 22 |
liver primordium | 5.15e-12 | 22 |
septum transversum | 5.15e-12 | 22 |
liver bud | 5.15e-12 | 22 |
subdivision of trunk | 7.70e-12 | 66 |
epithelial tube | 5.51e-11 | 47 |