FFCP PHASE1:Hg19::chr12:42719947..42719983,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=51535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19369 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8W6A0,F8WF16,Q8NEY8,E9PAX8,F8VP48,F8VRK2 | ||
|association_with_transcript=0bp_to_ENST00000256678,ENST00000317560,ENST00000337898,ENST00000358314,ENST00000395568,ENST00000395580,ENST00000432191,ENST00000449194,ENST00000549774,ENST00000550535,ENST00000551406,ENST00000551723,ENST00000552202,ENST00000552429,ENST00000552761,NM_001143787,NM_001143788,NM_001143789,NM_016488,NM_201438,NM_201439,NM_201440,NM_201515,uc001rna.2,uc001rnb.2,uc001rnc.2,uc001rnd.2,uc001rne.2,uc001rnf.2,uc001rng.1,uc001rnh.1,uc001rni.1,uc010skq.1,uc010skr.1,uc010sks.1,uc010skt.1,uc010sku.1_5end | |association_with_transcript=0bp_to_ENST00000256678,ENST00000317560,ENST00000337898,ENST00000358314,ENST00000395568,ENST00000395580,ENST00000432191,ENST00000449194,ENST00000549774,ENST00000550535,ENST00000551406,ENST00000551723,ENST00000552202,ENST00000552429,ENST00000552761,NM_001143787,NM_001143788,NM_001143789,NM_016488,NM_201438,NM_201439,NM_201440,NM_201515,uc001rna.2,uc001rnb.2,uc001rnc.2,uc001rnd.2,uc001rne.2,uc001rnf.2,uc001rng.1,uc001rnh.1,uc001rni.1,uc010skq.1,uc010skr.1,uc010sks.1,uc010skt.1,uc010sku.1_5end | ||
|cluster_id=chr12:42719947..42719983,+ | |cluster_id=chr12:42719947..42719983,+ |
Latest revision as of 07:56, 18 September 2015
Short description: | p1@PPHLN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPHLN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256678, ENST00000317560, ENST00000337898, ENST00000358314, ENST00000395568, ENST00000395580, ENST00000432191, ENST00000449194, ENST00000549774, ENST00000550535, ENST00000551406, ENST00000551723, ENST00000552202, ENST00000552429, ENST00000552761, NM_001143787, NM_001143788, NM_001143789, NM_016488, NM_201438, NM_201439, NM_201440, NM_201515, uc001rna.2, uc001rnb.2, uc001rnc.2, uc001rnd.2, uc001rne.2, uc001rnf.2, uc001rng.1, uc001rnh.1, uc001rni.1, uc010skq.1, uc010skr.1, uc010sks.1, uc010skt.1, uc010sku.1_5end |
EntrezGene: | PPHLN1 |
HGNC: | 19369 |
UniProt: | F8W6A0F8WF16Q8NEY8E9PAX8F8VP48F8VRK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.29e-24 | 168 |
hematopoietic cell | 8.42e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.50e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-21 | 161 |
lymphocyte | 5.07e-19 | 53 |
common lymphoid progenitor | 5.07e-19 | 53 |
lymphoid lineage restricted progenitor cell | 9.64e-19 | 52 |
leukocyte | 6.76e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 8.33e-13 | 120 |
nongranular leukocyte | 4.22e-12 | 115 |
mature alpha-beta T cell | 8.10e-11 | 18 |
alpha-beta T cell | 8.10e-11 | 18 |
immature T cell | 8.10e-11 | 18 |
mature T cell | 8.10e-11 | 18 |
immature alpha-beta T cell | 8.10e-11 | 18 |
T cell | 6.07e-10 | 25 |
pro-T cell | 6.07e-10 | 25 |
lymphocyte of B lineage | 1.55e-08 | 24 |
pro-B cell | 1.55e-08 | 24 |
mesenchymal cell | 2.72e-08 | 354 |
B cell | 3.76e-08 | 14 |
connective tissue cell | 6.70e-08 | 361 |
CD8-positive, alpha-beta T cell | 1.02e-07 | 11 |
motile cell | 1.31e-07 | 386 |
myeloid cell | 9.67e-07 | 108 |
common myeloid progenitor | 9.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.12e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.27e-09 | 51 |
immune system cancer | 1.27e-09 | 51 |
leukemia | 1.42e-09 | 39 |
myeloid leukemia | 1.10e-08 | 31 |
disease of cellular proliferation | 1.35e-08 | 239 |
cancer | 2.36e-08 | 235 |