UBERON:0000105
From FANTOM5_SSTAR
| Name: | life cycle stage | ||
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| Definition: | "A spatiotemporal region encompassing some part of the life cycle of an organism." [UBERON:cjm] | ||
| Xrefs: |
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| Synonyms: |
"developmental stage" EXACT [] "stage" NARROW [] | ||
| Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000000(processual entity) |
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Children
| is a: | UBERON:0000092 (post-embryonic stage),UBERON:0000104 (life cycle),UBERON:0000112 (juvenile stage),UBERON:0007221 (neonate stage) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10355-105E4 (occipital cortex, newborn, donor10223)
- 10356-105E5 (parietal lobe, newborn, donor10223)
- 10357-105E6 (cerebellum, newborn, donor10223)
- 10358-105E7 (substantia nigra, newborn, donor10223)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10360-105E9 (amygdala, newborn, donor10223)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000105 (life cycle stage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
