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MacroAPE 1083:4-TTTAAAGCGG

From FANTOM5_SSTAR

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Full Name: 4-TTTAAAGCGG,CNhs10647,BestGuess:NANOG_f1_HM09(0.621152689555457),T:1415.0(35.52%),B:11215.6(25.42%),P:1e-44

Motif matrix
POACGT
1162.725134.425138.67979.18
2130.18120.275120.2751044.27
3166.97128.765142.915976.35
41008.895118.86137.255149.99
5991.915135.84140.085147.16
6976.35155.65142.915140.085
7128.765148.575998.99138.67
8114.6151049.93152.8297.635
9185.365179.705905.6144.33
10166.97149.99977.765120.275

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

MNB1A#MA0053.1-30.001770310.8426690.705335TTTAAAGCGGAAAGC+
Dof3#MA0021.1-30.001778480.8465580.705336TTTAAAGCGGAAAGCG+
PBF#MA0064.1-30.002223241.058260.705335TTTAAAGCGGAAAGC+
ceh-22#MA0264.100.004096871.950110.79358310TTTAAAGCGGTTTCAAGTGGT-
Dof2#MA0020.1-30.004169041.984460.7935836TTTAAAGCGGAAAGCA+
Tcfcp2l1#MA0145.140.008288673.945410.99974710TTTAAAGCGGCCAGTTCAAACCAG+
YGR067C#MA0425.110.01297786.177420.99974710TTTAAAGCGGTGAAAAAGTGGGGT-