MacroAPE 1083:5-GCGATTCAAA
From FANTOM5_SSTAR
Full Name: 5-GCGATTCAAA,CNhs11280,BestGuess:POU5F1.p2.SwissRegulon.nucfreq(0.660812030307913),T:491.0(34.75%),B:10290.7(21.81%),P:1e-28
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| ARR1#MA0274.1 | -3 | 0.00584494 | 2.78219 | 1 | 7 | GCGATTCAAA | ATTCAAGT | - |
| Fos#MA0099.1 | 0 | 0.013289 | 6.32558 | 1 | 8 | GCGATTCAAA | GTGAGTCA | + |
| Sox2#MA0143.1 | 5 | 0.0150539 | 7.16564 | 1 | 10 | GCGATTCAAA | CCTTTGTTATGCAAA | + |
