Personal tools

UBERON:0003928

From FANTOM5_SSTAR

Revision as of 17:42, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:digestive system duct
Namespace:FANTOM
Definition:"A duct that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:

TAO:0005162

ZFA:0005162
Synonyms: "duct of digestive system" EXACT [OBOL:automatic]
"duct of gastrointestinal system" EXACT [OBOL:automatic]
"gastrointestinal system duct" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct)
part_of:UBERON:0001007(digestive system)



Children

is a:UBERON:0002394 (bile duct),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0007329 (pancreatic duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003928 (digestive system duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_f74c7e3398ca3e8b41131d1a5959c6e6p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_f74c7e3398ca3e8b41131d1a5959c6e6p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_f74c7e3398ca3e8b41131d1a5959c6e6p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_f74c7e3398ca3e8b41131d1a5959c6e6p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_f74c7e3398ca3e8b41131d1a5959c6e6p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:51831254..51831256, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:93895817..93895819, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003928&oldid=3277604"