Personal tools

FFCP PHASE2:Mm9::chr3:116210989..116211037,-

From FANTOM5_SSTAR

Revision as of 22:05, 5 August 2015 by Autoedit (talk | contribs) (Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:66368 |HGNC= |MCL_coexpression_id=60 |TSSclassifier=NA |UniProt=uniprot:D3Z263 |association_with_transcript=-6bp_to...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Short description:p1@Rtcd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtcd1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -6bp_to_ENSMUST00000153005_5end
EntrezGene:66368
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtcd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I625.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.46
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A521.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.87
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A348.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D226.38
GP2+ M cell, pool1.CNhs13228.11845-124H929.29
GP2+ M cell, pool2.CNhs13231.11846-124I127.14
GP2+ M cell, pool3.CNhs13240.11847-124I229.09
Ileum epithelium, pool1.CNhs13199.10252-104B940.47
Ileum epithelium, pool2.CNhs13232.10253-104C132.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C831.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C428.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C129.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.85
Mouse Granule cells, donor1.CNhs12131.11713-123C330.55
Mouse Granule cells, donor2.CNhs12357.11731-123E339.67
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D131.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.89
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D533.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F531.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.55
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.59
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.04
Mouse Schwann, donor1.CNhs12507.11728-123D928.32
Mouse Schwann, donor2.CNhs12573.11746-123F931.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I831.09
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.15
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D728.65
adrenal gland, embryo E14.CNhs11038.406-44C525.85
adrenal gland, embryo E16.CNhs11004.1254-43D625.27
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F528.34
adrenal gland, neonate N00.CNhs11191.1311-23C123.40
adrenal gland, neonate N25.CNhs11223.1377-27I324.25
amnion, adult pregnant day17.5.CNhs10488.583-22A818.29
aorta, adult.CNhs10498.46-23H124.15
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F519.25
bone (os femoris), neonate N16.CNhs11225.1525-43A615.24
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I228.07
colon, adult.CNhs10468.36-18H728.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.25
corpora quadrigemina, adult.CNhs10501.16-22A440.14
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F161.32
cortex, adult.CNhs10473.12-14D541.37
cortex, neonate N30.CNhs11107.1392-42F249.86
diencephalon, adult.CNhs10482.20-12F241.14
diencephalon, neonate N30.CNhs11201.1388-42B243.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.91
epididymis, adult.CNhs10490.58-23B227.80
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C625.37
eyeball, embryo E14.CNhs10521.399-16E235.18
eyeball, embryo E15.CNhs10593.426-16C926.29
eyeball, embryo E17.CNhs11023.1261-18D423.66
eyeball, neonate N00.CNhs11207.633-15C631.64
eyeball, neonate N01.CNhs11140.1532-43E733.57
eyeball, neonate N02.CNhs11205.1551-44G828.30
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E227.59
forelimb, embryo E12.CNhs10600.359-14H226.66
forelimb, embryo E13.CNhs10589.384-1E224.11
forelimb, embryo E14.CNhs10577.413-26A826.30
forelimb, embryo E15.CNhs11007.437-20E718.07
forelimb, embryo E17.CNhs10598.1517-43C420.20
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.90
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.57
heart, embryo E11.CNhs10586.331-24E924.65
heart, embryo E12.CNhs11015.353-12F515.01
heart, embryo E13.CNhs11013.376-3I918.19
heart, embryo E14.CNhs10597.403-26D421.31
heart, embryo E15.CNhs11017.431-16C819.09
heart, embryo E16.CNhs11021.457-17C616.66
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G322.00
heart, neonate N00.CNhs11213.639-21E324.17
heart, neonate N03.CNhs11221.1349-25I225.84
heart, neonate N10.CNhs11118.749-24G120.85
heart, neonate N16.CNhs11209.782-15G120.02
heart, neonate N20.CNhs11127.821-26I620.03
heart, neonate N25.CNhs11196.1351-25D317.78
heart, neonate N30.CNhs11202.1390-42D224.29
hippocampus, adult.CNhs10478.13-16E839.53
hippocampus, neonate N00.CNhs11228.627-43G138.69
intestinal mucosa, adult.CNhs10506.860-29I323.79
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I520.48
intestine, embryo E13.CNhs11010.381-16D524.15
intestine, embryo E15.CNhs10602.976-16D822.81
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D323.35
intestine, embryo E18.CNhs10526.1289-20F729.87
intestine, neonate N00.CNhs11126.644-26D128.95
intestine, neonate N01.CNhs11192.1322-23E929.32
intestine, neonate N06.CNhs11102.688-20B828.40
intestine, neonate N07.CNhs11095.720-20F229.25
intestine, neonate N10.CNhs11098.755-23A526.71
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E326.58
intestine, neonate N30.CNhs11131.1384-42G134.45
kidney, embryo E14.CNhs10606.411-4I926.55
kidney, embryo E15.CNhs10997.434-16F819.88
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I223.22
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G724.06
kidney, neonate N10.CNhs11206.758-6D523.14
kidney, neonate N20.CNhs11113.832-19I122.88
kidney, neonate N25.CNhs11122.1353-25F320.88
kidney, neonate N30.CNhs11203.1385-42H128.87
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F821.02
liver, embryo E13.CNhs10524.378-3H616.51
liver, embryo E14.CNhs10594.409-16E117.99
liver, embryo E15.CNhs10520.433-16D714.20
liver, embryo E16.CNhs10523.462-17F517.61
liver, embryo E17.CNhs10510.481-18A315.53
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F420.10
liver, neonate N03.CNhs11123.1345-25G215.65
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B915.91
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H113.99
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B123.46
lung, embryo E12.CNhs10522.354-16G228.42
lung, embryo E14.CNhs10604.404-26F821.84
lung, embryo E15.CNhs11020.432-17C519.35
lung, embryo E16.CNhs10998.458-17B620.18
lung, embryo E17.CNhs10605.480-44A617.09
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C621.66
lung, neonate N06.CNhs11212.683-20E520.81
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E618.50
lung, neonate N20.CNhs11109.822-18A418.02
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H217.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C243.51
medulla oblongata, neonate N30.CNhs11200.1396-42A340.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I716.47
ovary, embryo E18.CNhs11040.505-44H726.18
ovary, neonate N00.CNhs11217.1299-22I431.93
oviduct, adult pregnant day01.CNhs10500.988-6G618.15
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F232.05
pancreas, embryo E16.CNhs11003.460-26E521.69
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G927.65
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D818.18
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E627.73
pituitary gland, embryo E13.CNhs11009.370-44C728.72
pituitary gland, embryo E14.CNhs11037.398-44A526.36
pituitary gland, embryo E15.CNhs10592.427-16B930.68
pituitary gland, embryo E16.CNhs11036.449-43F626.04
pituitary gland, embryo E17.CNhs11039.1265-44F528.80
pituitary gland, neonate N00.CNhs11190.1308-22E925.58
placenta, adult pregnant day10.CNhs10472.539-13I714.78
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F824.48
skin, adult.CNhs10492.30-1C310.06
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H315.62
skin, neonate N06.CNhs11097.693-20I514.80
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I126.23
spinal cord, adult.CNhs10505.24-13C943.76
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D117.90
spleen, neonate N20.CNhs11112.824-19H116.27
spleen, neonate N25.CNhs11099.1354-25G313.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.38
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E324.99
stomach, embryo E15.CNhs10603.1252-16G821.55
stomach, embryo E16.CNhs11022.459-17D418.14
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C615.72
stomach, neonate N03.CNhs11193.1340-24B818.07
stomach, neonate N07.CNhs11210.718-18A920.42
stomach, neonate N25.CNhs11104.1355-25E419.37
stomach, neonate N30.CNhs11134.1386-42I155.73
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G5222.66
testis, embryo E13.CNhs11031.389-23F524.67
testis, embryo E15.CNhs11034.443-27C524.65
testis, embryo E16.CNhs11033.470-26G519.64
testis, embryo E17.CNhs11029.486-18I520.67
testis, embryo E18.CNhs11027.503-18G520.11
testis, neonate N00.CNhs11189.1300-22B721.24
testis, neonate N07.CNhs11222.726-26I422.40
testis, neonate N10.CNhs11204.763-44D930.09
testis, neonate N20.CNhs11110.839-18H367.64
testis, neonate N30.CNhs11130.1391-42E2114.92
thymus, adult.CNhs10471.38-12B521.17
thymus, embryo E14.CNhs11041.402-44I422.10
thymus, embryo E15.CNhs11005.430-45I219.21
thymus, embryo E16.CNhs11002.456-26C519.49
thymus, embryo E17.CNhs10581.478-18C119.69
thymus, embryo E18.CNhs10595.1273-19G418.08
thymus, neonate N02.CNhs11181.1541-43F820.43
thymus, neonate N03.CNhs11137.2104-43C718.61
thymus, neonate N06.CNhs11197.681-26C420.29
thymus, neonate N07.CNhs11211.713-19D323.40
thymus, neonate N10.CNhs11194.748-24E417.64
thymus, neonate N20.CNhs11186.820-7A217.44
thymus, neonate N25.CNhs11125.1362-25G716.16
thymus, neonate N30.CNhs11132.1393-42G221.15
tongue, adult.CNhs10499.32-1B414.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.12
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D511.58
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.33
whole body, embryo E11.CNhs11014.324-5I834.77
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H228.85
whole body, embryo E14.5.CNhs10578.420-27D224.31
whole body, embryo E14.CNhs10519.395-14B128.51
whole body, embryo E16.CNhs10514.453-14F226.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.65
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.86
whole body, embryo E17.5.CNhs10513.490-9F924.31
whole body, embryo E17.CNhs10517.475-3I527.48
whole body, embryo E18.CNhs10516.493-3B321.52
whole body, neonate N00.CNhs10525.657-19C222.56
whole body, neonate N01.CNhs10576.659-23C621.81
whole body, neonate N06.CNhs10515.692-21D125.37
whole body, neonate N10.CNhs10518.761-6B428.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.75e-1123
neuroblast (sensu Vertebrata)2.75e-1123
electrically responsive cell1.49e-0939
electrically active cell1.49e-0939
neuron1.08e-0833
neuronal stem cell1.08e-0833
neuroblast1.08e-0833
electrically signaling cell1.08e-0833
ectodermal cell1.21e-0844
neurectodermal cell1.21e-0844
neural cell1.90e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.65e-2354
nervous system3.43e-2275
neurectoderm3.98e-2264
neural plate3.98e-2264
presumptive neural plate3.98e-2264
neural tube5.19e-2252
neural rod5.19e-2252
future spinal cord5.19e-2252
neural keel5.19e-2252
central nervous system2.00e-2173
brain6.83e-1947
future brain6.83e-1947
regional part of brain1.30e-1846
gray matter6.83e-1834
structure with developmental contribution from neural crest1.90e-1792
anterior neural tube3.08e-1740
pre-chordal neural plate5.63e-1749
regional part of forebrain1.10e-1639
forebrain1.10e-1639
future forebrain1.10e-1639
ecto-epithelium2.57e-1673
ectoderm-derived structure8.85e-1695
ectoderm8.85e-1695
presumptive ectoderm8.85e-1695
brain grey matter2.85e-1529
regional part of telencephalon2.85e-1529
telencephalon2.85e-1529
cerebral cortex8.28e-1121
cerebral hemisphere8.28e-1121
pallium8.28e-1121
regional part of cerebral cortex1.53e-0917
occipital lobe1.21e-0710
visual cortex1.21e-0710
neocortex1.21e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE2:Mm9::chr3:116210989..116211037,-&oldid=3946987"