Personal tools

UBERON:0002256

From FANTOM5_SSTAR

Revision as of 10:57, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0002256 |name=dorsal horn of spinal cord |namespace= |def="the pronounced, dorsolaterally oriented ridge of grey matter in each lateral half of the spi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:dorsal horn of spinal cord
Definition:"the pronounced, dorsolaterally oriented ridge of grey matter in each lateral half of the spinal cord[MP]. the dorsal (more towards the back) grey matter of the spinal cord. It receives several types of sensory information from the body, including light touch, proprioception, and vibration. This information is sent from receptors of the skin, bones, and joints through sensory neurons whose cell bodies lie in the dorsal root ganglion[WP]. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input[GO]." [GO:0021516, MP:0006282, Wikipedia:Posterior_horn_of_spinal_cord]
Xrefs:
links:

BM:SpC-DH
EMAPA:17773
FMA:256530
[ 200px-Medulla_spinalis_-_Section_-_English.svg.png 200px-Medulla_spinalis_-_Section_-_English.svg.png]
MA:0001119
ncithesaurus:Dorsal_Horn_of_the_Spinal_Cord
NIF_GrossAnatomy:birnlex_2667
SCTID:180961004
VHOG:0001287

ZFA:0000649
Synonyms: "cornu dorsale" EXACT [ZFA:0000649]
"dorsal gray column of spinal cord" EXACT [FMA:256530]
"dorsal gray horn" EXACT [NIF_GrossAnatomy:birnlex_2667]
"dorsal gray matter of spinal cord" EXACT [FMA:256530]
"dorsal grey column of spinal cord" EXACT []
"dorsal horn" EXACT [ZFA:0000649]
"dorsal horn spinal cord" EXACT [ZFA:0000649]
"dorsal region of mature spinal cord" EXACT []
"dorsal region of spinal cord" EXACT []
"dorsal spinal cord" EXACT []
"posterior gray column of spinal cord" EXACT [FMA:256530]
"posterior gray horn of spinal cord" EXACT [FMA:256530]
"posterior grey column of spinal cord" EXACT []
"posterior horn of spinal cord" EXACT [Wikipedia:Posterior_horn_of_spinal_cord]
"spinal cord dorsal horn" EXACT []
"spinal cord posterior horn" EXACT [NIF_GrossAnatomy:birnlex_2667]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_77405-MA_0001119
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001948(regional part of spinal cord)
part_of:UBERON:0002315(gray matter of spinal cord)



Children

part of:CL:0002611 (neuron of the dorsal spinal cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
  • 11720-123D1 (Mouse Neurons - dorsal spinal cord, donor1)
  • 11738-123F1 (Mouse Neurons - dorsal spinal cord, donor2)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002256 (dorsal horn of spinal cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.66e-44FFCP PHASE2:Mm9::chr1:173090774..173090783,+#_807ad7edd5145adc27e7c34ef9056bf4p@chr1:173090774..173090783, +
1.66e-44FFCP PHASE1:Mm9::chr1:173090774..173090783,+#_807ad7edd5145adc27e7c34ef9056bf4p@chr1:173090774..173090783, +
1.42e-35FFCP PHASE2:Mm9::chr11:96608388..96608420,+#_fcd67e5d18446535ecf97d1bec986c69p@chr11:96608388..96608420, +
1.42e-35FFCP PHASE1:Mm9::chr11:96608388..96608420,+#_fcd67e5d18446535ecf97d1bec986c69p@chr11:96608388..96608420, +
1.42e-35FFCP PHASE1:Mm9::chr7:30089029..30089032,+#_fcd67e5d18446535ecf97d1bec986c69p10@Dpf1
1.42e-35FFCP PHASE2:Mm9::chr7:30089029..30089032,+#_fcd67e5d18446535ecf97d1bec986c69p10@Dpf1
2.13e-35FFCP PHASE2:Mm9::chr18:84268738..84268777,-#_31b3a08726633717cca90b35f06fe886p@chr18:84268738..84268777, -
2.13e-35FFCP PHASE2:Mm9::chr14:33413108..33413118,+#_31b3a08726633717cca90b35f06fe886p3@Prrxl1
2.13e-35FFCP PHASE1:Mm9::chr14:33413108..33413118,+#_31b3a08726633717cca90b35f06fe886p3@Prrxl1
2.13e-35FFCP PHASE1:Mm9::chr18:84268738..84268777,-#_31b3a08726633717cca90b35f06fe886p@chr18:84268738..84268777, -
4.75e-35FFCP PHASE1:Mm9::chr2:70053872..70053879,+#_d933168e87e10ca40c0b683cb82a8bffp@chr2:70053872..70053879, +
4.75e-35FFCP PHASE2:Mm9::chr2:70053872..70053879,+#_d933168e87e10ca40c0b683cb82a8bffp@chr2:70053872..70053879, +
3.41e-30FFCP PHASE2:Mm9::chr15:102821294..102821313,+#_9c8563b9e23952ac793d18acf721fed0p@chr15:102821294..102821313, +
3.41e-30FFCP PHASE1:Mm9::chr15:102821294..102821313,+#_9c8563b9e23952ac793d18acf721fed0p@chr15:102821294..102821313, +
6.69e-30FFCP PHASE2:Mm9::chr3:10183923..10183927,-#_5137afc9fe072c9087f34e76964da36ep3@Pmp2
6.69e-30FFCP PHASE1:Mm9::chr4:137573261..137573269,+#_5137afc9fe072c9087f34e76964da36ep@chr4:137573261..137573269, +
6.69e-30FFCP PHASE1:Mm9::chr3:10183923..10183927,-#_5137afc9fe072c9087f34e76964da36ep3@Pmp2
6.69e-30FFCP PHASE2:Mm9::chr4:137573261..137573269,+#_5137afc9fe072c9087f34e76964da36ep@chr4:137573261..137573269, +
2.55e-29FFCP PHASE2:Mm9::chr11:96143545..96143556,+#_1c3d2934591915c26f4a1e266dfb1842p6@Hoxb8
2.55e-29FFCP PHASE1:Mm9::chr11:96143545..96143556,+#_1c3d2934591915c26f4a1e266dfb1842p6@Hoxb8
2.38e-26FFCP PHASE2:Mm9::chr11:58996296..58996303,-#_06e329b0f7408e06ad5263753fa3233dp3@Gjc2
2.38e-26FFCP PHASE1:Mm9::chr11:58996296..58996303,-#_06e329b0f7408e06ad5263753fa3233dp3@Gjc2
3.19e-26FFCP PHASE2:Mm9::chr11:32036107..32036145,-#_4036b79d54179c5f1512dc2f8f087a13p@chr11:32036107..32036145, -
3.19e-26FFCP PHASE1:Mm9::chr11:32036107..32036145,-#_4036b79d54179c5f1512dc2f8f087a13p@chr11:32036107..32036145, -
4.27e-26FFCP PHASE1:Mm9::chr17:35096058..35096095,-#_0eb917498fcf27dd7e14bf2f87f44e8cp3@Hspa1b
4.27e-26FFCP PHASE2:Mm9::chr2:85036854..85036865,-#_0eb917498fcf27dd7e14bf2f87f44e8cp1@Lrrc55
4.27e-26FFCP PHASE2:Mm9::chr17:35096058..35096095,-#_0eb917498fcf27dd7e14bf2f87f44e8cp3@Hspa1b
4.27e-26FFCP PHASE1:Mm9::chr2:85036854..85036865,-#_0eb917498fcf27dd7e14bf2f87f44e8cp1@Lrrc55
5.7e-26FFCP PHASE2:Mm9::chr11:96160098..96160112,+#_3908897af09700665ff8ffbc4136befcp8@Hoxb6
5.7e-26FFCP PHASE1:Mm9::chr11:96160098..96160112,+#_3908897af09700665ff8ffbc4136befcp8@Hoxb6
7.61e-26FFCP PHASE1:Mm9::chr2:74529917..74529926,+#_42c2ead4e6853e43da99138c0dc16701p5@Hoxd10
7.61e-26FFCP PHASE2:Mm9::chr2:74529917..74529926,+#_42c2ead4e6853e43da99138c0dc16701p5@Hoxd10
1.02e-25FFCP PHASE1:Mm9::chr2:74530108..74530131,+#_368137b13b5d4ca2af9524a5bbd62a04p@chr2:74530108..74530131, +
1.02e-25FFCP PHASE2:Mm9::chr2:74530108..74530131,+#_368137b13b5d4ca2af9524a5bbd62a04p@chr2:74530108..74530131, +
1.8e-25FFCP PHASE1:Mm9::chr11:102750776..102750792,-#_785d6b831c1de739f86a2f9182390378p@chr11:102750776..102750792, -
1.8e-25FFCP PHASE2:Mm9::chr11:102750776..102750792,-#_785d6b831c1de739f86a2f9182390378p@chr11:102750776..102750792, -
3.06e-23FFCP PHASE1:Mm9::chr12:86865781..86865791,+#_3e97071838aeeeb6420a6e73b526b2ebp@chr12:86865781..86865791, +
3.06e-23FFCP PHASE1:Mm9::chr1:173088898..173088910,+#_3e97071838aeeeb6420a6e73b526b2ebp@chr1:173088898..173088910, +
3.06e-23FFCP PHASE2:Mm9::chr1:173088898..173088910,+#_3e97071838aeeeb6420a6e73b526b2ebp@chr1:173088898..173088910, +
3.06e-23FFCP PHASE2:Mm9::chr12:86865781..86865791,+#_3e97071838aeeeb6420a6e73b526b2ebp@chr12:86865781..86865791, +
3.95e-23FFCP PHASE2:Mm9::chr4:124373153..124373164,+#_57bf103520b0c134a77e0d336bc0ef64p@chr4:124373153..124373164, +
3.95e-23FFCP PHASE2:Mm9::chr19:46407266..46407281,-#_57bf103520b0c134a77e0d336bc0ef64p@chr19:46407266..46407281, -
3.95e-23FFCP PHASE1:Mm9::chr19:46407266..46407281,-#_57bf103520b0c134a77e0d336bc0ef64p@chr19:46407266..46407281, -
3.95e-23FFCP PHASE1:Mm9::chr4:124373153..124373164,+#_57bf103520b0c134a77e0d336bc0ef64p@chr4:124373153..124373164, +
5.75e-23FFCP PHASE1:Mm9::chr1:173090487..173090490,+#_f0e74943b4265d226745aa5ac6d200edp@chr1:173090487..173090490, +
5.75e-23FFCP PHASE2:Mm9::chr1:173090487..173090490,+#_f0e74943b4265d226745aa5ac6d200edp@chr1:173090487..173090490, +
6.57e-23FFCP PHASE2:Mm9::chr19:46407404..46407418,-#_065adcc5d904e7a5325f1f142d6c0814p@chr19:46407404..46407418, -
6.57e-23FFCP PHASE1:Mm9::chr19:46407404..46407418,-#_065adcc5d904e7a5325f1f142d6c0814p@chr19:46407404..46407418, -
9.5e-23FFCP PHASE2:Mm9::chr7:57165440..57165441,+#_e83bebe6a08bcaa670b99ded09a78563p13@Slc6a5
9.5e-23FFCP PHASE1:Mm9::chr19:6498166..6498173,+#_e83bebe6a08bcaa670b99ded09a78563p18@Nrxn2
9.5e-23FFCP PHASE2:Mm9::chr5:115995281..115995324,+#_e83bebe6a08bcaa670b99ded09a78563p14@Pxn
9.5e-23FFCP PHASE1:Mm9::chr7:57165440..57165441,+#_e83bebe6a08bcaa670b99ded09a78563p13@Slc6a5
9.5e-23FFCP PHASE2:Mm9::chr19:6498166..6498173,+#_e83bebe6a08bcaa670b99ded09a78563p18@Nrxn2
9.5e-23FFCP PHASE1:Mm9::chr11:44456648..44456656,+#_e83bebe6a08bcaa670b99ded09a78563p@chr11:44456648..44456656, +
9.5e-23FFCP PHASE2:Mm9::chr11:44456648..44456656,+#_e83bebe6a08bcaa670b99ded09a78563p@chr11:44456648..44456656, +
9.5e-23FFCP PHASE1:Mm9::chr5:115995281..115995324,+#_e83bebe6a08bcaa670b99ded09a78563p14@Pxn
1.09e-22FFCP PHASE2:Mm9::chr11:96132456..96132467,+#_bc8f4e16ec993bded64004d03a78d238p4@Hoxb9
1.09e-22FFCP PHASE1:Mm9::chr11:96132456..96132467,+#_bc8f4e16ec993bded64004d03a78d238p4@Hoxb9
1.8e-22FFCP PHASE1:Mm9::chr13:33175964..33175973,+#_52c700012343b7ef987fd7610172e41dp2@Serpinb1b
1.8e-22FFCP PHASE2:Mm9::chr13:33175964..33175973,+#_52c700012343b7ef987fd7610172e41dp2@Serpinb1b
2.32e-22FFCP PHASE1:Mm9::chr7:57165602..57165612,+#_208fad75056f6def869a51a1ec7c6a2cp6@Slc6a5
2.32e-22FFCP PHASE2:Mm9::chr7:57165602..57165612,+#_208fad75056f6def869a51a1ec7c6a2cp6@Slc6a5
2.97e-22FFCP PHASE2:Mm9::chr11:105898171..105898180,+#_65cc946eb49ffea830c0a29b79ac8801p4@Dcaf7
2.97e-22FFCP PHASE1:Mm9::chr11:105898171..105898180,+#_65cc946eb49ffea830c0a29b79ac8801p4@Dcaf7
5.12e-21FFCP PHASE1:Mm9::chr4:150371190..150371197,+#_72231d2a86b4e43cdec502ade8adbcb4p1@Uts2
5.12e-21FFCP PHASE2:Mm9::chr4:150371190..150371197,+#_72231d2a86b4e43cdec502ade8adbcb4p1@Uts2
6.43e-21FFCP PHASE1:Mm9::chr19:46407289..46407300,-#_f8167630e5828d39966eaceb1580e11cp@chr19:46407289..46407300, -
6.43e-21FFCP PHASE2:Mm9::chr19:46407289..46407300,-#_f8167630e5828d39966eaceb1580e11cp@chr19:46407289..46407300, -
1.27e-20FFCP PHASE2:Mm9::chr11:96146541..96146544,+#_df8714371e1d6be0ece22020c6c4d2d2p@chr11:96146541..96146544, +
1.27e-20FFCP PHASE1:Mm9::chr11:96146541..96146544,+#_df8714371e1d6be0ece22020c6c4d2d2p@chr11:96146541..96146544, +
1.59e-20FFCP PHASE2:Mm9::chr11:33103589..33103599,-#_85bf2521abca128ffdaba636007a39cfp3@Tlx3
1.59e-20FFCP PHASE1:Mm9::chr11:33103589..33103599,-#_85bf2521abca128ffdaba636007a39cfp3@Tlx3
2.0e-20FFCP PHASE2:Mm9::chr7:31700035..31700068,-#_6a197d821ba16d326bd72537188930eap2@Mag
2.0e-20FFCP PHASE1:Mm9::chr7:31700035..31700068,-#_6a197d821ba16d326bd72537188930eap2@Mag
6.1e-20FFCP PHASE1:Mm9::chr11:102749020..102749031,-#_aed8ace6c3de7c6fd34012dd70763ee2p@chr11:102749020..102749031, -
6.1e-20FFCP PHASE1:Mm9::chr1:187242150..187242173,+#_aed8ace6c3de7c6fd34012dd70763ee2p@chr1:187242150..187242173, +
6.1e-20FFCP PHASE2:Mm9::chr1:187242150..187242173,+#_aed8ace6c3de7c6fd34012dd70763ee2p@chr1:187242150..187242173, +
6.1e-20FFCP PHASE2:Mm9::chr11:102749020..102749031,-#_aed8ace6c3de7c6fd34012dd70763ee2p@chr11:102749020..102749031, -
7.62e-20FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_820b054fed7c026df99500511caa3d6ap@chr11:102758074..102758083, +
7.62e-20FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_820b054fed7c026df99500511caa3d6ap@chr11:102758074..102758083, +
3.08e-19FFCP PHASE1:Mm9::chr1:173089678..173089690,+#_5acf73e411c92b1b4ea0755a8169485dp3@Mpz
3.08e-19FFCP PHASE2:Mm9::chr1:173089678..173089690,+#_5acf73e411c92b1b4ea0755a8169485dp3@Mpz
3.79e-19FFCP PHASE2:Mm9::chr14:68704745..68704754,+#_7de6bafec666e42142b7846d4265db3dp@chr14:68704745..68704754, +
3.79e-19FFCP PHASE2:Mm9::chrX:61750178..61750185,+#_7de6bafec666e42142b7846d4265db3dp@chrX:61750178..61750185, +
3.79e-19FFCP PHASE1:Mm9::chrX:61750178..61750185,+#_7de6bafec666e42142b7846d4265db3dp@chrX:61750178..61750185, +
3.79e-19FFCP PHASE1:Mm9::chr14:68704745..68704754,+#_7de6bafec666e42142b7846d4265db3dp@chr14:68704745..68704754, +
5.72e-19FFCP PHASE1:Mm9::chr18:82753999..82754008,+#_f3fe9cef5b147e34da294b4a06fea5e4p@chr18:82753999..82754008, +
5.72e-19FFCP PHASE2:Mm9::chr18:82753999..82754008,+#_f3fe9cef5b147e34da294b4a06fea5e4p@chr18:82753999..82754008, +
7.02e-19FFCP PHASE2:Mm9::chr10:80488930..80488949,-#_d47cf58564b28fb4a661b79f433118a7p@chr10:80488930..80488949, -
7.02e-19FFCP PHASE2:Mm9::chr2:70399563..70399583,+#_d47cf58564b28fb4a661b79f433118a7p@chr2:70399563..70399583, +
7.02e-19FFCP PHASE1:Mm9::chr10:80488930..80488949,-#_d47cf58564b28fb4a661b79f433118a7p@chr10:80488930..80488949, -
7.02e-19FFCP PHASE2:Mm9::chr5:24032551..24032557,-#_d47cf58564b28fb4a661b79f433118a7p1@Gbx1
7.02e-19FFCP PHASE1:Mm9::chr2:70399563..70399583,+#_d47cf58564b28fb4a661b79f433118a7p@chr2:70399563..70399583, +
7.02e-19FFCP PHASE1:Mm9::chr5:24032551..24032557,-#_d47cf58564b28fb4a661b79f433118a7p1@Gbx1
1.06e-18FFCP PHASE2:Mm9::chr11:5050065..5050097,-#_c89457d9a52e42b68e01dc1accbc23cbp4@Emid1
1.06e-18FFCP PHASE1:Mm9::chr11:5050065..5050097,-#_c89457d9a52e42b68e01dc1accbc23cbp4@Emid1
1.3e-18FFCP PHASE2:Mm9::chr15:72378067..72378074,-#_6728df33bee9282290b4a3252ff37448p@chr15:72378067..72378074, -
1.3e-18FFCP PHASE1:Mm9::chr15:72378067..72378074,-#_6728df33bee9282290b4a3252ff37448p@chr15:72378067..72378074, -
1.59e-18FFCP PHASE2:Mm9::chr12:47821823..47821831,-#_19254f1b0bab2e1d6ca60a62f8cc08dap@chr12:47821823..47821831, -
1.59e-18FFCP PHASE1:Mm9::chr12:47821823..47821831,-#_19254f1b0bab2e1d6ca60a62f8cc08dap@chr12:47821823..47821831, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002256&oldid=414850"