Personal tools

UBERON:0004709

From FANTOM5_SSTAR

Revision as of 11:14, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0004709 |name=limb/fin of posterior region of body |namespace= |def="A limb/fin that is part of a posterior region of body [Obol]." [OBOL:automatic] |...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:limb/fin of posterior region of body
Definition:"A limb/fin that is part of a posterior region of body [Obol]." [OBOL:automatic]
Synonyms: "hindlimb/pelvic fin" EXACT [UBERON:cjm]
Comments:TODO - as defined, this includes ALL paired fins in the posterior region

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004708(paired limb/fin)
develops_from:UBERON:0005420(pelvic appendage bud)
part_of:UBERON:0000154(posterior region of body)



Children

is a:UBERON:0002103 (hindlimb)
part of:UBERON:0007270 (pelvic appendage musculature),UBERON:0007273 (pelvic appendage skeleton),UBERON:0014795 (pelvic appendage muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004709 (limb/fin of posterior region of body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_3c6a9d738cd1fca03926d873773f9e4fp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_3c6a9d738cd1fca03926d873773f9e4fp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr2:76859417..76859418, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_3c6a9d738cd1fca03926d873773f9e4fp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_3c6a9d738cd1fca03926d873773f9e4fp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_3c6a9d738cd1fca03926d873773f9e4fp@chr2:76859417..76859418, +
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_ea5e76db229c3de64403fad1bf1cb541p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_ea5e76db229c3de64403fad1bf1cb541p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_ea5e76db229c3de64403fad1bf1cb541p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_ea5e76db229c3de64403fad1bf1cb541p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_ea5e76db229c3de64403fad1bf1cb541p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_ea5e76db229c3de64403fad1bf1cb541p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_ea5e76db229c3de64403fad1bf1cb541p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_ea5e76db229c3de64403fad1bf1cb541p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_ea5e76db229c3de64403fad1bf1cb541p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_ea5e76db229c3de64403fad1bf1cb541p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_ea5e76db229c3de64403fad1bf1cb541p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_ea5e76db229c3de64403fad1bf1cb541p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_ea5e76db229c3de64403fad1bf1cb541p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_ea5e76db229c3de64403fad1bf1cb541p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_ea5e76db229c3de64403fad1bf1cb541p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_ea5e76db229c3de64403fad1bf1cb541p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_ea5e76db229c3de64403fad1bf1cb541p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_ea5e76db229c3de64403fad1bf1cb541p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_ea5e76db229c3de64403fad1bf1cb541p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_ea5e76db229c3de64403fad1bf1cb541p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_ea5e76db229c3de64403fad1bf1cb541p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_ea5e76db229c3de64403fad1bf1cb541p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_ea5e76db229c3de64403fad1bf1cb541p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_ea5e76db229c3de64403fad1bf1cb541p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_ea5e76db229c3de64403fad1bf1cb541p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_ea5e76db229c3de64403fad1bf1cb541p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_ea5e76db229c3de64403fad1bf1cb541p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_ea5e76db229c3de64403fad1bf1cb541p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_ea5e76db229c3de64403fad1bf1cb541p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_ea5e76db229c3de64403fad1bf1cb541p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_ea5e76db229c3de64403fad1bf1cb541p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_ea5e76db229c3de64403fad1bf1cb541p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_ea5e76db229c3de64403fad1bf1cb541p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_ea5e76db229c3de64403fad1bf1cb541p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_ea5e76db229c3de64403fad1bf1cb541p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_ea5e76db229c3de64403fad1bf1cb541p@chr2:179399371..179399376, -
2.55e-98FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr6:125535391..125535409, +
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_b0799479a35edb80c8e1bafcd14cd07cp73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr22:26299595..26299605,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr22:26299595..26299605, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr18:8608021..8608050, +
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr2:152590465..152590472, -
2.55e-98FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_b0799479a35edb80c8e1bafcd14cd07cp38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_b0799479a35edb80c8e1bafcd14cd07cp73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_b0799479a35edb80c8e1bafcd14cd07cp38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr10:97037060..97037066, -
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr10:97037060..97037066, -
2.55e-98FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_b0799479a35edb80c8e1bafcd14cd07cp@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr3:35732964..35732965, +
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_b0799479a35edb80c8e1bafcd14cd07cp27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_b0799479a35edb80c8e1bafcd14cd07cp@chr22:26299595..26299605, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004709&oldid=415156"