FFCP PHASE1:Mm9::chr9:83040208..83040221,-: Difference between revisions
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|description=CAGE_peak_2_at_Hmgn3_5end | |description=CAGE_peak_2_at_Hmgn3_5end | ||
|id=chr9:83040208..83040221,- | |id=chr9:83040208..83040221,- | ||
|ontology_enrichment_celltype=CL:0000221!7.63e-17!44;CL:0000133!7.63e-17!44;CL:0002319!1.47e-16!43;CL:0000055!7.61e-15!50;CL:0000540!2.77e-14!33;CL:0000047!2.77e-14!33;CL:0000031!2.77e-14!33;CL:0000404!2.77e-14!33;CL:0000393!2.36e-13!39;CL:0000211!2.36e-13!39;CL:0000117!4.96e-11!23;CL:0000337!4.96e-11!23;CL:0002321!1.21e-07!70;CL:0000220!1.21e-07!70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=2.7225304007815,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0.782391344348039,3.48840250208714,2.41654801007919,4.08302788055995,3.21968769738334,2.87505128729943,0.503347818173209,0,0,3.8588915405392,0.85960031981627,2.06268836910977,3.03474691289397,1.5869729378161,3.80298842103708,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,3.84218305321555,3.94020526772215,3.64516033495565,3.36519938162211,4.28476476605705,4.41737081903227,2.9397791811589,3.45043695665651,0.919218786610021,1.10115880999389,3.95830748064082,3.68655679814984,1.71452174049252,3.29355516968675,1.56274011167028,2.23346399201105,5.6276261003168,5.34793867218835,4.41942878210502,6.97621235915604,4.28718725398191,1.59025005999687,1.66257432234928,0.289864488701678,0,0,0,0,0,0,1.02258193546835,1.29893002301434,2.12003744706204,2.11265129665021,5.13305909657271,2.54805239706646,0,0.649473123033642,1.52015919285059,3.0331466700887,0.11418387971906,0.517875767294343,0.742210695324124,0.693941307064543,0.608930956624282,1.61430848079241,2.11011696773672,1.76383060703557,2.51333182659351,0,0.289198713839823,0.884610551949874,1.7794353494215,0.662524555381181,0,0,0.585561594023094,1.67557365450764,0,0.239630249011841,0.599902730993408,0.254140454146129,0.748953197024114,2.74500361691176,4.52355667606312,2.60736480288415,2.30143911597297,1.24672826735736,3.40706652442291,1.93494791315601,0.497627882440372,0.252722758433675,1.05220927943237,1.04096354370163,2.29902104433473,2.16074555766419,4.06903008156431,3.46986145671772,2.17793324484245,2.81105173679186,1.03481348295606,1.07783996466421,2.83659120251729,2.11141348996739,2.19195732427575,1.66828349535359,3.83077383174383,3.2925141825271,0.995171334092466,0,0.257347907114715,0.284163499395593,1.44988040774851,0.938104239924385,2.88099298337624,1.18372367792605,1.77087808572663,2.1597395804233,1.86027155800326,1.3413670069981,1.5179494507732,2.79751744852917,0.985004784474571,0.891756905004413,0.730999937126662,0.439100230582101,0.402619256281115,3.15434922846191,4.73361216944708,0,0,0.213288250535234,1.16118335930219,0.644337306610467,1.00841762311671,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,1.26244475802573,0.822074982615345,0.590440591918409,0.627994911365499,0.616985819609003,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.369506380333209,0.757965647081939,1.14075483509418,0.678980343100753,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.797273843287435,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,0,0,1.10374698521893,1.44495530989013,1.64096361229084,0.655739781506702,0.252470927204373,5.04813151066011,4.29482618726302,1.93881057959519,1.91175038362042,2.22798674082394,1.69845918473299,2.42886421004937,2.04579100537918,1.97643888973262,1.92792789853084,0.283880170416537,1.78065603667255,2.28041743095006,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.712994756769443,0,0,0,1.70219802876894,1.44048875225048,0.517434735131018,3.42939256050548,3.3694644392032,3.0322698992352,2.96188237083818,1.8267896946876,0.23467170806371,0,0.882113592219848,1.6488625294148,2.09903754704677,1.74907482291652,0.716234064018819,0.820704498725306,0,1.29797711407357,0,0.82554747185289,0.925972636848558,0.565105371014073,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0.829199842826543,0,0.949007980743406,2.43983360552218,1.40406943068342,0.836353184057875,1.09181281873089,1.07891477107857,0.909188012978695,1.04702376793612,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.388902376688095,1.42075805825504,1.35164900392623,2.46450201156083,2.604087696879,0.734015410979976,0.241584120826006,0.576060012515731,0,0.405450430580328,0.513554785824136,0.389762468933385,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.226730383615211,0.887943813496259,0.358855426437903,0.335769232728157,1.9318959403219,0.563047426353546,0.36630324853453,0.428736758158132,1.00314420807073,5.0827665835536,4.14292712856459,1.71868654031819,4.1244763762485,0.685082519770642,3.0215755895588,3.37511250115903,4.5032120322422,2.71885445390523,2.07104124700728,1.86817225651518,1.19707462020309,0.853668028770671,2.67417388775123,1.88651846365184,1.2869045591501,1.11123363900808,1.23621034343337,1.28367683836726,2.02157769411038,0.760437899670719,0.754505365544305,1.77918864192777,1.47257850531199,2.8717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| |phase1_expression=2.7225304007815,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.367093504323363,0.782391344348039,3.48840250208714,2.41654801007919,4.08302788055995,3.21968769738334,2.87505128729943,0.503347818173209,0,0,3.8588915405392,0.85960031981627,2.06268836910977,3.03474691289397,1.5869729378161,3.80298842103708,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,3.84218305321555,3.94020526772215,3.64516033495565,3.36519938162211,4.28476476605705,4.41737081903227,2.9397791811589,3.45043695665651,0.919218786610021,1.10115880999389,3.95830748064082,3.68655679814984,1.71452174049252,3.29355516968675,1.56274011167028,2.23346399201105,5.6276261003168,5.34793867218835,4.41942878210502,6.97621235915604,4.28718725398191,1.59025005999687,1.66257432234928,0.289864488701678,0,0,0,0,0,0,1.02258193546835,1.29893002301434,2.12003744706204,2.11265129665021,5.13305909657271,2.54805239706646,0,0.649473123033642,1.52015919285059,3.0331466700887,0.11418387971906,0.517875767294343,0.742210695324124,0.693941307064543,0.608930956624282,1.61430848079241,2.11011696773672,1.76383060703557,2.51333182659351,0,0.289198713839823,0.884610551949874,1.7794353494215,0.662524555381181,0,0,0.585561594023094,1.67557365450764,0,0.239630249011841,0.599902730993408,0.254140454146129,0.748953197024114,2.74500361691176,4.52355667606312,2.60736480288415,2.30143911597297,1.24672826735736,3.40706652442291,1.93494791315601,0.497627882440372,0.252722758433675,1.05220927943237,1.04096354370163,2.29902104433473,2.16074555766419,4.06903008156431,3.46986145671772,2.17793324484245,2.81105173679186,1.03481348295606,1.07783996466421,2.83659120251729,2.11141348996739,2.19195732427575,1.66828349535359,3.83077383174383,3.2925141825271,0.995171334092466,0,0.257347907114715,0.284163499395593,1.44988040774851,0.938104239924385,2.88099298337624,1.18372367792605,1.77087808572663,2.1597395804233,1.86027155800326,1.3413670069981,1.5179494507732,2.79751744852917,0.985004784474571,0.891756905004413,0.730999937126662,0.439100230582101,0.402619256281115,3.15434922846191,4.73361216944708,0,0,0.213288250535234,1.16118335930219,0.644337306610467,1.00841762311671,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,1.26244475802573,0.822074982615345,0.590440591918409,0.627994911365499,0.616985819609003,0,0.333690211432188,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.369506380333209,0.757965647081939,1.14075483509418,0.678980343100753,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0.797273843287435,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,0,0,1.10374698521893,1.44495530989013,1.64096361229084,0.655739781506702,0.252470927204373,5.04813151066011,4.29482618726302,1.93881057959519,1.91175038362042,2.22798674082394,1.69845918473299,2.42886421004937,2.04579100537918,1.97643888973262,1.92792789853084,0.283880170416537,1.78065603667255,2.28041743095006,0.659880491890142,0,0.242780636154981,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.712994756769443,0,0,0,1.70219802876894,1.44048875225048,0.517434735131018,3.42939256050548,3.3694644392032,3.0322698992352,2.96188237083818,1.8267896946876,0.23467170806371,0,0.882113592219848,1.6488625294148,2.09903754704677,1.74907482291652,0.716234064018819,0.820704498725306,0,1.29797711407357,0,0.82554747185289,0.925972636848558,0.565105371014073,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0.829199842826543,0,0.949007980743406,2.43983360552218,1.40406943068342,0.836353184057875,1.09181281873089,1.07891477107857,0.909188012978695,1.04702376793612,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.388902376688095,1.42075805825504,1.35164900392623,2.46450201156083,2.604087696879,0.734015410979976,0.241584120826006,0.576060012515731,0,0.405450430580328,0.513554785824136,0.389762468933385,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.226730383615211,0.887943813496259,0.358855426437903,0.335769232728157,1.9318959403219,0.563047426353546,0.36630324853453,0.428736758158132,1.00314420807073,5.0827665835536,4.14292712856459,1.71868654031819,4.1244763762485,0.685082519770642,3.0215755895588,3.37511250115903,4.5032120322422,2.71885445390523,2.07104124700728,1.86817225651518,1.19707462020309,0.853668028770671,2.67417388775123,1.88651846365184,1.2869045591501,1.11123363900808,1.23621034343337,1.28367683836726,2.02157769411038,0.760437899670719,0.754505365544305,1.77918864192777,1.47257850531199,2.8717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| ||
|short_description=p2@Hmgn3 | |short_description=p2@Hmgn3 | ||
}} | }} | ||
Revision as of 08:07, 19 April 2012
| Short description: | p2@Hmgn3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Hmgn3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_026122, NM_175074, uc009qwc.2, uc009qwd.2, uc009qwe.2_5end |
| EntrezGene: | Hmgn3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
