Cytoscape test: Difference between revisions
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<p>TF to TF network. Mouseover nodes and edges to see attributes. Motif is an attribute of the source TF nodes (shown in | <p>TF to TF network. Mouseover nodes and edges to see attributes. Motif is an attribute of the source TF nodes (shown in orange). Promoter and z-score are attributes of the TF to TF edge. | ||
<br />Motifs shown are the top (maximum 30) motifs in the sample. TFs shown have at least one CAGE promoter with at at least 10 TPM expression (RLE normalized) in the sample. Edges shown have a z-score of at least 1.5 (based on correlation between motif activity and promoter expression). | |||
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<div id="cytoscapeweb" style="width:800px;height:600px"> | <div id="cytoscapeweb" style="width:800px;height:600px"> | ||
Revision as of 17:07, 25 April 2012
FF:10563-108A5
TF to TF network. Mouseover nodes and edges to see attributes. Motif is an attribute of the source TF nodes (shown in orange). Promoter and z-score are attributes of the TF to TF edge.
Motifs shown are the top (maximum 30) motifs in the sample. TFs shown have at least one CAGE promoter with at at least 10 TPM expression (RLE normalized) in the sample. Edges shown have a z-score of at least 1.5 (based on correlation between motif activity and promoter expression).
Cytoscape Web will replace the contents of this div with your graph.
