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|id=DOID:0060060
|id=DOID:0060060
|name=non-Hodgkin lymphoma
|name=non-Hodgkin lymphoma
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=OMIM:605027
|is_a=DOID:0060058
|is_a=DOID:0060058
|synonym=
|synonym=
|comment=
|comment=OMIM mapping confirmed by DO. [LS].
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|located_in=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 13:58, 11 June 2012

Name:non-Hodgkin lymphoma
Namespace:disease_ontology
Xrefs:
links:
OMIM:605027
Comments:OMIM mapping confirmed by DO. [LS].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0060058(lymphoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)

Mouse (Mus musculus)

  • 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060060 (non-Hodgkin lymphoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr14:22356420..22356461,+#_d9b34dfe55b80e23154b21761881a869p1@AB305742, p1@AF532837, p1@AF532838, p1@AF532839, p1@AF532840, p1@AF532841, p1@AF532842, p1@AF532843, p1@AF532844, p1@AF532845, p1@AF532847, p1@AF532848, p1@AF532849, p1@AF532850, p1@AF532851, p1@AF532852, p1@AF532853, p1@AF532854, p1@AF532856, p1@AY135832, p1@AY135833, p1@AY135834, p1@AY135835, p1@AY135836, p1@AY135837, p1@AY135838, p1@AY135839, p1@AY135840, p1@AY135841, p1@AY135842, p1@AY135843, p1@AY135844, p1@AY135846, p1@AY135847, p1@AY135849, p1@AY135850, p1@AY135851, p1@AY135852, p1@AY135853, p1@EU340840, p1@M17652, p1@M17653, p1@M27369, p1@S82064, p1@X04940, p1@X04946, p1@X92766, p1@X92783, p1@X92883
5.42e-195FFCP PHASE2:Hg19::chr12:29165730..29165749,-#_d9b34dfe55b80e23154b21761881a869p@chr12:29165730..29165749, -
5.42e-195FFCP PHASE1:Hg19::chr5:107253874..107253881,-#_d9b34dfe55b80e23154b21761881a869p@chr5:107253874..107253881, -
5.42e-195FFCP PHASE2:Hg19::chr18:56816533..56816576,+#_d9b34dfe55b80e23154b21761881a869p@chr18:56816533..56816576, +
5.42e-195FFCP PHASE1:Hg19::chr13:50802126..50802138,+#_d9b34dfe55b80e23154b21761881a869p@chr13:50802126..50802138, +
5.42e-195FFCP PHASE1:Hg19::chr18:56816533..56816576,+#_d9b34dfe55b80e23154b21761881a869p@chr18:56816533..56816576, +
5.42e-195FFCP PHASE2:Hg19::chr14:82495120..82495125,-#_d9b34dfe55b80e23154b21761881a869p@chr14:82495120..82495125, -
5.42e-195FFCP PHASE2:Hg19::chr13:50802126..50802138,+#_d9b34dfe55b80e23154b21761881a869p@chr13:50802126..50802138, +
5.42e-195FFCP PHASE2:Hg19::chr6:100604462..100604467,-#_d9b34dfe55b80e23154b21761881a869p@chr6:100604462..100604467, -
5.42e-195FFCP PHASE2:Hg19::chr1:93043060..93043065,-#_d9b34dfe55b80e23154b21761881a869p@chr1:93043060..93043065, -
5.42e-195FFCP PHASE1:Hg19::chr12:29165730..29165749,-#_d9b34dfe55b80e23154b21761881a869p@chr12:29165730..29165749, -
5.42e-195FFCP PHASE2:Hg19::chr11:118075251..118075262,-#_d9b34dfe55b80e23154b21761881a869p7@AMICA1
5.42e-195FFCP PHASE1:Hg19::chr14:22356420..22356461,+#_d9b34dfe55b80e23154b21761881a869p1@AB305742, p1@AF532837, p1@AF532838, p1@AF532839, p1@AF532840, p1@AF532841, p1@AF532842, p1@AF532843, p1@AF532844, p1@AF532845, p1@AF532847, p1@AF532848, p1@AF532849, p1@AF532850, p1@AF532851, p1@AF532852, p1@AF532853, p1@AF532854, p1@AF532856, p1@AY135832, p1@AY135833, p1@AY135834, p1@AY135835, p1@AY135836, p1@AY135837, p1@AY135838, p1@AY135839, p1@AY135840, p1@AY135841, p1@AY135842, p1@AY135843, p1@AY135844, p1@AY135846, p1@AY135847, p1@AY135849, p1@AY135850, p1@AY135851, p1@AY135852, p1@AY135853, p1@EU340840, p1@M17652, p1@M17653, p1@M27369, p1@S82064, p1@X04940, p1@X04946, p1@X92766, p1@X92783, p1@X92883
5.42e-195FFCP PHASE2:Hg19::chr9:93917134..93917162,-#_d9b34dfe55b80e23154b21761881a869p@chr9:93917134..93917162, -
5.42e-195FFCP PHASE2:Hg19::chr1:1173212..1173215,-#_d9b34dfe55b80e23154b21761881a869p@chr1:1173212..1173215, -
5.42e-195FFCP PHASE2:Hg19::chr8:42037604..42037608,-#_d9b34dfe55b80e23154b21761881a869p@chr8:42037604..42037608, -
5.42e-195FFCP PHASE1:Hg19::chr6:100604462..100604467,-#_d9b34dfe55b80e23154b21761881a869p@chr6:100604462..100604467, -
5.42e-195FFCP PHASE1:Hg19::chr1:93043060..93043065,-#_d9b34dfe55b80e23154b21761881a869p@chr1:93043060..93043065, -
5.42e-195FFCP PHASE1:Hg19::chr11:118075251..118075262,-#_d9b34dfe55b80e23154b21761881a869p7@AMICA1
5.42e-195FFCP PHASE2:Hg19::chr5:107253874..107253881,-#_d9b34dfe55b80e23154b21761881a869p@chr5:107253874..107253881, -
5.42e-195FFCP PHASE1:Hg19::chr9:93917134..93917162,-#_d9b34dfe55b80e23154b21761881a869p@chr9:93917134..93917162, -
5.42e-195FFCP PHASE1:Hg19::chr8:42037604..42037608,-#_d9b34dfe55b80e23154b21761881a869p@chr8:42037604..42037608, -
5.42e-195FFCP PHASE1:Hg19::chr1:1173212..1173215,-#_d9b34dfe55b80e23154b21761881a869p@chr1:1173212..1173215, -
5.42e-195FFCP PHASE1:Hg19::chr14:82495120..82495125,-#_d9b34dfe55b80e23154b21761881a869p@chr14:82495120..82495125, -
9.37e-99FFCP PHASE2:Hg19::chr6:128134176..128134183,-#_2bb36d548f73fc3d8d261dbfb273b0f3p10@THEMIS
9.37e-99FFCP PHASE1:Hg19::chr1:93043161..93043170,-#_2bb36d548f73fc3d8d261dbfb273b0f3p@chr1:93043161..93043170, -
9.37e-99FFCP PHASE2:Hg19::chr9:92116537..92116544,-#_2bb36d548f73fc3d8d261dbfb273b0f3p@chr9:92116537..92116544, -
9.37e-99FFCP PHASE1:Hg19::chr6:128134176..128134183,-#_2bb36d548f73fc3d8d261dbfb273b0f3p10@THEMIS
9.37e-99FFCP PHASE1:Hg19::chr14:22356128..22356162,+#_2bb36d548f73fc3d8d261dbfb273b0f3p4@TRAV12-2
9.37e-99FFCP PHASE1:Hg19::chr9:92116537..92116544,-#_2bb36d548f73fc3d8d261dbfb273b0f3p@chr9:92116537..92116544, -
9.37e-99FFCP PHASE2:Hg19::chr14:22356128..22356162,+#_2bb36d548f73fc3d8d261dbfb273b0f3p4@TRAV12-2
9.37e-99FFCP PHASE2:Hg19::chr1:93043161..93043170,-#_2bb36d548f73fc3d8d261dbfb273b0f3p@chr1:93043161..93043170, -
2.55e-98FFCP PHASE2:Hg19::chr12:68619448..68619455,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p4@IL26
2.55e-98FFCP PHASE1:Hg19::chr5:45161715..45161717,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr5:45161715..45161717, +
2.55e-98FFCP PHASE2:Hg19::chr2:127790367..127790404,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr2:127790367..127790404, +
2.55e-98FFCP PHASE2:Hg19::chr11:67256355..67256383,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p3@AIP
2.55e-98FFCP PHASE1:Hg19::chr8:124008167..124008169,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr8:124008167..124008169, +
2.55e-98FFCP PHASE1:Hg19::chr2:53318401..53318420,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr2:53318401..53318420, -
2.55e-98FFCP PHASE1:Hg19::chr11:67256355..67256383,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p3@AIP
2.55e-98FFCP PHASE1:Hg19::chr2:127790367..127790404,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr2:127790367..127790404, +
2.55e-98FFCP PHASE2:Hg19::chr6:6649339..6649349,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:6649339..6649349, -
2.55e-98FFCP PHASE2:Hg19::chr20:10092229..10092265,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr20:10092229..10092265, -
2.55e-98FFCP PHASE1:Hg19::chr12:68619421..68619426,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p5@IL26
2.55e-98FFCP PHASE1:Hg19::chr6:6649339..6649349,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:6649339..6649349, -
2.55e-98FFCP PHASE2:Hg19::chr6:6649384..6649391,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:6649384..6649391, -
2.55e-98FFCP PHASE1:Hg19::chr12:68658423..68658430,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr12:68658423..68658430, +
2.55e-98FFCP PHASE2:Hg19::chr8:29327513..29327519,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr8:29327513..29327519, +
2.55e-98FFCP PHASE1:Hg19::chr20:10092229..10092265,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr20:10092229..10092265, -
2.55e-98FFCP PHASE2:Hg19::chr6:31541408..31541421,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:31541408..31541421, +
2.55e-98FFCP PHASE1:Hg19::chr12:68619448..68619455,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p4@IL26
2.55e-98FFCP PHASE2:Hg19::chr17:32686417..32686426,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr17:32686417..32686426, -
2.55e-98FFCP PHASE1:Hg19::chr6:6649384..6649391,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:6649384..6649391, -
2.55e-98FFCP PHASE1:Hg19::chr8:29327513..29327519,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr8:29327513..29327519, +
2.55e-98FFCP PHASE2:Hg19::chr5:68290599..68290607,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr5:68290599..68290607, -
2.55e-98FFCP PHASE2:Hg19::chr9:36903715..36903727,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr9:36903715..36903727, -
2.55e-98FFCP PHASE2:Hg19::chr12:68619421..68619426,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p5@IL26
2.55e-98FFCP PHASE1:Hg19::chr6:31541408..31541421,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr6:31541408..31541421, +
2.55e-98FFCP PHASE2:Hg19::chr12:68658423..68658430,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr12:68658423..68658430, +
2.55e-98FFCP PHASE1:Hg19::chr17:32686417..32686426,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr17:32686417..32686426, -
2.55e-98FFCP PHASE2:Hg19::chr5:45161715..45161717,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr5:45161715..45161717, +
2.55e-98FFCP PHASE1:Hg19::chr5:68290599..68290607,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr5:68290599..68290607, -
2.55e-98FFCP PHASE2:Hg19::chr8:124008167..124008169,+#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr8:124008167..124008169, +
2.55e-98FFCP PHASE2:Hg19::chr2:53318401..53318420,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr2:53318401..53318420, -
2.55e-98FFCP PHASE1:Hg19::chr9:36903715..36903727,-#_9b1af43e1dfa0b4420e7faf02d4e7af5p@chr9:36903715..36903727, -
1.23e-66FFCP PHASE2:Hg19::chr11:73720276..73720286,-#_1031099dac9a231d24a0b3f7d8c1c2f5p2@UCP3
1.23e-66FFCP PHASE1:Hg19::chr13:40881048..40881070,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr13:40881048..40881070, -
1.23e-66FFCP PHASE2:Hg19::chr16:11301814..11301825,+#_1031099dac9a231d24a0b3f7d8c1c2f5p2@AK127887
1.23e-66FFCP PHASE2:Hg19::chr13:40880982..40881019,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr13:40880982..40881019, -
1.23e-66FFCP PHASE1:Hg19::chr21:36430055..36430067,+#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr21:36430055..36430067, +
1.23e-66FFCP PHASE2:Hg19::chr13:40881048..40881070,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr13:40881048..40881070, -
1.23e-66FFCP PHASE1:Hg19::chr16:11301790..11301804,+#_1031099dac9a231d24a0b3f7d8c1c2f5p1@AK127887
1.23e-66FFCP PHASE1:Hg19::chr11:73720276..73720286,-#_1031099dac9a231d24a0b3f7d8c1c2f5p2@UCP3
1.23e-66FFCP PHASE2:Hg19::chr9:92116561..92116575,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr9:92116561..92116575, -
1.23e-66FFCP PHASE2:Hg19::chr20:44692500..44692506,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr20:44692500..44692506, -
1.23e-66FFCP PHASE2:Hg19::chr3:140980521..140980532,+#_1031099dac9a231d24a0b3f7d8c1c2f5p9@ACPL2
1.23e-66FFCP PHASE1:Hg19::chr16:11301814..11301825,+#_1031099dac9a231d24a0b3f7d8c1c2f5p2@AK127887
1.23e-66FFCP PHASE1:Hg19::chr9:92116561..92116575,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr9:92116561..92116575, -
1.23e-66FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr1:93043102..93043113, -
1.23e-66FFCP PHASE1:Hg19::chr3:140980521..140980532,+#_1031099dac9a231d24a0b3f7d8c1c2f5p9@ACPL2
1.23e-66FFCP PHASE1:Hg19::chr13:40880982..40881019,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr13:40880982..40881019, -
1.23e-66FFCP PHASE2:Hg19::chr16:11301790..11301804,+#_1031099dac9a231d24a0b3f7d8c1c2f5p1@AK127887
1.23e-66FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr1:93043102..93043113, -
1.23e-66FFCP PHASE1:Hg19::chr20:44692500..44692506,-#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr20:44692500..44692506, -
1.23e-66FFCP PHASE2:Hg19::chr21:36430055..36430067,+#_1031099dac9a231d24a0b3f7d8c1c2f5p@chr21:36430055..36430067, +
2.39e-66FFCP PHASE1:Hg19::chr16:11076917..11076920,-#_a215730d43ebaedc354b92afae9b495fp@chr16:11076917..11076920, -
2.39e-66FFCP PHASE2:Hg19::chr8:26449449..26449465,+#_a215730d43ebaedc354b92afae9b495fp@chr8:26449449..26449465, +
2.39e-66FFCP PHASE1:Hg19::chr8:26449449..26449465,+#_a215730d43ebaedc354b92afae9b495fp@chr8:26449449..26449465, +
2.39e-66FFCP PHASE2:Hg19::chr6:31540746..31540753,+#_a215730d43ebaedc354b92afae9b495fp10@LTA
2.39e-66FFCP PHASE2:Hg19::chr2:74517994..74518001,-#_a215730d43ebaedc354b92afae9b495fp12@SLC4A5
2.39e-66FFCP PHASE1:Hg19::chr6:31540746..31540753,+#_a215730d43ebaedc354b92afae9b495fp10@LTA
2.39e-66FFCP PHASE2:Hg19::chr16:11076917..11076920,-#_a215730d43ebaedc354b92afae9b495fp@chr16:11076917..11076920, -
2.39e-66FFCP PHASE2:Hg19::chr1:209897512..209897518,-#_a215730d43ebaedc354b92afae9b495fp1@ENST00000441672
2.39e-66FFCP PHASE1:Hg19::chr2:74517994..74518001,-#_a215730d43ebaedc354b92afae9b495fp12@SLC4A5
2.39e-66FFCP PHASE2:Hg19::chr2:106407366..106407377,-#_a215730d43ebaedc354b92afae9b495fp@chr2:106407366..106407377, -
2.39e-66FFCP PHASE2:Hg19::chr19:47598056..47598065,-#_a215730d43ebaedc354b92afae9b495fp@chr19:47598056..47598065, -
2.39e-66FFCP PHASE1:Hg19::chr1:209897512..209897518,-#_a215730d43ebaedc354b92afae9b495fp1@ENST00000441672
2.39e-66FFCP PHASE1:Hg19::chr2:106407366..106407377,-#_a215730d43ebaedc354b92afae9b495fp@chr2:106407366..106407377, -
2.39e-66FFCP PHASE1:Hg19::chr19:47598056..47598065,-#_a215730d43ebaedc354b92afae9b495fp@chr19:47598056..47598065, -
4.66e-66FFCP PHASE2:Hg19::chr12:68835921..68835926,-#_b24b01872543d6c40844c2f13e651f9ep2@ENST00000546086
4.66e-66FFCP PHASE2:Hg19::chr11:46497888..46497896,-#_b24b01872543d6c40844c2f13e651f9ep@chr11:46497888..46497896, -

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