DOID:3151: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:3151
|name=skin squamous cell carcinoma
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|def=
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|is_a=DOID:3451
|synonym="Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819];;"squa...") |
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|id=DOID:3151 | |id=DOID:3151 | ||
|name=skin squamous cell carcinoma | |name=skin squamous cell carcinoma | ||
|namespace= | |namespace=disease_ontology | ||
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|xref= | |xref=NCI:C4819;;SNOMEDCT_2010_1_31:254651007;;UMLS_CUI:C0553723 | ||
|is_a=DOID:3451 | |is_a=DOID:3451 | ||
|synonym="Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819];;"squamous cell carcinoma of skin" RELATED [];;"squamous cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254651007] | |synonym="Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819];;"squamous cell carcinoma of skin" RELATED [];;"squamous cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254651007] | ||
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
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Revision as of 14:00, 11 June 2012
| Name: | skin squamous cell carcinoma | |
|---|---|---|
| Namespace: | disease_ontology | |
| Xrefs: |
| |
| Synonyms: |
"Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819] "squamous cell carcinoma of skin" RELATED [] "squamous cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254651007] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3451(skin carcinoma) |
|---|
Children
| is a: | DOID:3149 (keratoacanthoma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10713-109I2
- 10791-110H8 (keratoacanthoma cell line:HKA-1)
Mouse (Mus musculus)
- 10713-109I2
- 10791-110H8 (keratoacanthoma cell line:HKA-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3151 (skin squamous cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
