UBERON:0000331: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0000331
|name=ileal mucosa
|namespace=
|def="A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
|xref=BTO:0000619;;FMA:14956;;SCTID:85458007
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Revision as of 17:09, 15 June 2012
Name: | ileal mucosa | |
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Definition: | "A mucosa that is part of a ileum [Obol]." [OBOL:automatic] | |
Xrefs: |
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Synonyms: |
"Ileal mucous membrane" EXACT [FMA:14956] "Ileum mucosa" EXACT [FMA:14956] "ileum mucosa" EXACT [OBOL:automatic] "ileum mucosa of organ" EXACT [OBOL:automatic] "ileum mucous membrane" EXACT [OBOL:automatic] "ileum organ mucosa" EXACT [OBOL:automatic] "mucosa of ileum" EXACT [OBOL:automatic] "mucosa of organ of ileum" EXACT [OBOL:automatic] "mucous membrane of ileum" EXACT [OBOL:automatic] "organ mucosa of ileum" EXACT [OBOL:automatic] | |
Alt_id: | UBERON:BTO_0000619-FMA_14956 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000064(organ part),UBERON:0001204(mucosa of small intestine) |
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part_of: | UBERON:0002116(ileum) |
Children
is a: | FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL) |
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part of: | UBERON:0008344 (intestinal villus of ileum) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000331 (ileal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data