UBERON:0003101: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003101
|name=male organism
|namespace=
|def="Gonochoristic organism that can produce male gametes." [CARO:0000027]
|xref=AAO:0010033;;BILA:0000027;;C...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:18, 15 June 2012
| Name: | male organism | |
|---|---|---|
| Definition: | "Gonochoristic organism that can produce male gametes." [CARO:0000027] | |
| Xrefs: |
| |
| Synonyms: |
"male" RELATED [TAO:0000242] "male human body" NARROW SENSU [FMA:67811] | |
| Alt_id: | UBERON:XAO_0003006-ZFA_0000242 | |
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000468(multi-cellular organism) |
|---|
Children
| disjoint from: | UBERON:0003100 (female organism) |
|---|---|
| part of: | UBERON:0000079 (male reproductive system),UBERON:0003135 (male reproductive organ),UBERON:0014403 (male anatomical structure) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10022-101D4 (prostate, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10092-102C2
- 10096-102C6 (testis, adult, pool2)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
... further results Mouse (Mus musculus)
- 10022-101D4 (prostate, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10092-102C2
- 10096-102C6 (testis, adult, pool2)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003101 (male organism), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
