Personal tools

UBERON:0004573: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0004573 |name=systemic artery |namespace= |def="Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular...")
 
No edit summary
Line 21: Line 21:
|part_of=UBERON:0004571
|part_of=UBERON:0004571
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:20, 15 June 2012

Name:systemic artery
Definition:"Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Artery#Systemic_arteries]
Xrefs:
links:
FMA:66464
Synonyms: "systemic arterial subtree" EXACT [FMA:66464]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001637(artery)
part_of:UBERON:0004571(systemic arterial system)



Children

is a:UBERON:0001529 (brachiocephalic artery),UBERON:0001533 (subclavian artery),UBERON:0001621 (coronary artery),UBERON:0002456 (internal thoracic artery),UBERON:0005396 (carotid artery segment)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004573 (systemic artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data