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Revision as of 17:21, 15 June 2012

Name:respiratory system skeletal muscle
Definition:"A portion of skeletal muscle tissue that is part of a respiratory system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001829
Synonyms: "respiratory system skeletal muscle tissue" EXACT [OBOL:automatic]
"skeletal muscle of apparatus respiratorius" EXACT [OBOL:automatic]
"skeletal muscle of respiratory system" EXACT [OBOL:automatic]
"skeletal muscle tissue of apparatus respiratorius" EXACT [OBOL:automatic]
"skeletal muscle tissue of respiratory system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001134(skeletal muscle tissue)
part_of:UBERON:0001004(respiratory system)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004830 (respiratory system skeletal muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_364bc01ab7c7231c909360187fa59253p@chr18:10458574..10458579, -
5.42e-195FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_364bc01ab7c7231c909360187fa59253p@chr18:10458574..10458579, -
2.55e-98FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-3
2.55e-98FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_c7793277a78f646628342c80dceb1080p@chr9:101832711..101832718, +
2.55e-98FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_c7793277a78f646628342c80dceb1080p@chr20:31571662..31571664, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_c7793277a78f646628342c80dceb1080p@chr1:223065664..223065673, +
2.55e-98FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-3
2.55e-98FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_c7793277a78f646628342c80dceb1080p13@BOC
2.55e-98FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-2
2.55e-98FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_c7793277a78f646628342c80dceb1080p13@BOC
2.55e-98FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_c7793277a78f646628342c80dceb1080p19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-2
2.55e-98FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_c7793277a78f646628342c80dceb1080p1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_c7793277a78f646628342c80dceb1080p19@PYGM
2.55e-98FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_c7793277a78f646628342c80dceb1080p@chr8:115584851..115584862, +
2.55e-98FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_c7793277a78f646628342c80dceb1080p1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_c7793277a78f646628342c80dceb1080p@chr8:115584851..115584862, +
2.55e-98FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_c7793277a78f646628342c80dceb1080p1@KRTAP9-8
2.55e-98FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_c7793277a78f646628342c80dceb1080p@chr17:10428881..10428898, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_c7793277a78f646628342c80dceb1080p@chr1:223065647..223065654, +
2.55e-98FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_c7793277a78f646628342c80dceb1080p@chr9:101832711..101832718, +
2.55e-98FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-5
2.55e-98FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_c7793277a78f646628342c80dceb1080p1@KRTAP9-8
2.55e-98FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_c7793277a78f646628342c80dceb1080p@chr17:10428881..10428898, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_c7793277a78f646628342c80dceb1080p@chr1:223065647..223065654, +
2.55e-98FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_c7793277a78f646628342c80dceb1080p1@KRTAP4-5
2.55e-98FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_c7793277a78f646628342c80dceb1080p@chr20:31571662..31571664, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_c7793277a78f646628342c80dceb1080p@chr1:223065664..223065673, +
1.23e-66FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_2294b53be88cf94202f16581d688638cp6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_2294b53be88cf94202f16581d688638cp@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_2294b53be88cf94202f16581d688638cp@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_2294b53be88cf94202f16581d688638cp@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_2294b53be88cf94202f16581d688638cp@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_2294b53be88cf94202f16581d688638cp4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_2294b53be88cf94202f16581d688638cp4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_2294b53be88cf94202f16581d688638cp6@PPP3CB
2.39e-66FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179588230..179588237, -
2.39e-66FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_1e152a91edf651c746838e28acd89cb0p@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_1e152a91edf651c746838e28acd89cb0p47@RBPJ
2.39e-66FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179542420..179542428, -
2.39e-66FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_1e152a91edf651c746838e28acd89cb0p23@TNNT3
2.39e-66FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179548750..179548755, -
2.39e-66FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_1e152a91edf651c746838e28acd89cb0p19@ADCY2
2.39e-66FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179542420..179542428, -
2.39e-66FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_1e152a91edf651c746838e28acd89cb0p19@ADCY2
2.39e-66FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_1e152a91edf651c746838e28acd89cb0p3@PGPEP1L
2.39e-66FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_1e152a91edf651c746838e28acd89cb0p@chr19:50997736..50997745, -
2.39e-66FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_1e152a91edf651c746838e28acd89cb0p@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_1e152a91edf651c746838e28acd89cb0p@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_1e152a91edf651c746838e28acd89cb0p3@PGPEP1L
2.39e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_1e152a91edf651c746838e28acd89cb0p47@RBPJ
2.39e-66FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_1e152a91edf651c746838e28acd89cb0p@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_1e152a91edf651c746838e28acd89cb0p@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_1e152a91edf651c746838e28acd89cb0p5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_1e152a91edf651c746838e28acd89cb0p@chr17:10533450..10533457, +
2.39e-66FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_1e152a91edf651c746838e28acd89cb0p@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_1e152a91edf651c746838e28acd89cb0p5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_1e152a91edf651c746838e28acd89cb0p@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_1e152a91edf651c746838e28acd89cb0p@chr17:10533450..10533457, +
2.39e-66FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179588230..179588237, -
2.39e-66FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_1e152a91edf651c746838e28acd89cb0p@chr10:99343436..99343448, +
2.39e-66FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_1e152a91edf651c746838e28acd89cb0p@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_1e152a91edf651c746838e28acd89cb0p@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_1e152a91edf651c746838e28acd89cb0p@chr10:99343436..99343448, +
2.39e-66FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_1e152a91edf651c746838e28acd89cb0p23@TNNT3
2.39e-66FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_1e152a91edf651c746838e28acd89cb0p@chr2:179548750..179548755, -
4.66e-66FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT33A
4.66e-66FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT25
4.66e-66FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152514527..152514536, -
4.66e-66FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_e0f2d7c13f691a65763ea4a8ce813ffcp4@KRT86
4.66e-66FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_e0f2d7c13f691a65763ea4a8ce813ffcp4@KRT86
4.66e-66FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT25
4.66e-66FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_e0f2d7c13f691a65763ea4a8ce813ffcp14@FLT1
4.66e-66FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152419209..152419216, -
4.66e-66FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_e0f2d7c13f691a65763ea4a8ce813ffcp14@FLT1
4.66e-66FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_e0f2d7c13f691a65763ea4a8ce813ffcp34@XIRP2
4.66e-66FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_e0f2d7c13f691a65763ea4a8ce813ffcp28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152419209..152419216, -
4.66e-66FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152342364..152342373, -
4.66e-66FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_e0f2d7c13f691a65763ea4a8ce813ffcp34@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_e0f2d7c13f691a65763ea4a8ce813ffcp28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152342364..152342373, -
4.66e-66FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_e0f2d7c13f691a65763ea4a8ce813ffcp1@KRT33A
4.66e-66FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152514527..152514536, -
4.66e-66FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_e0f2d7c13f691a65763ea4a8ce813ffcp@chr2:152476098..152476105, -
1.46e-50FFCP PHASE2:Hg19::chr10:35104131..35104138,-#_26ac9eb858bd7b8ddc0ba5971d52c146p4@PARD3
1.46e-50FFCP PHASE2:Hg19::chr22:32647133..32647135,-#_26ac9eb858bd7b8ddc0ba5971d52c146p@chr22:32647133..32647135, -
1.46e-50FFCP PHASE1:Hg19::chr22:32647133..32647135,-#_26ac9eb858bd7b8ddc0ba5971d52c146p@chr22:32647133..32647135, -
1.46e-50FFCP PHASE2:Hg19::chrX:21672387..21672391,-#_26ac9eb858bd7b8ddc0ba5971d52c146p@chrX:21672387..21672391, -
1.46e-50FFCP PHASE2:Hg19::chr11:94476841..94476846,+#_26ac9eb858bd7b8ddc0ba5971d52c146p@chr11:94476841..94476846, +
1.46e-50FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_26ac9eb858bd7b8ddc0ba5971d52c146p@chrX:21672387..21672391, -

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