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UBERON:0004854: Difference between revisions

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Revision as of 17:21, 15 June 2012

Name:gastrointestinal system mesentery
Definition:"A mesentery that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001900
Synonyms: "digestive system mesentery" EXACT [OBOL:automatic]
"mesentery of digestive system" EXACT [OBOL:automatic]
"mesentery of gastrointestinal system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002095(mesentery),UBERON:0004782(gastrointestinal system serosa)
part_of:UBERON:0005409(gastrointestinal system)



Children

is a:UBERON:0003281 (mesentery of stomach)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004854 (gastrointestinal system mesentery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data