UBERON:0006914: Difference between revisions
From FANTOM5_SSTAR
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|def="Epithelium composed of flattened platelike cells." [Dorlands_Medical_Dictionary:MerckSource]
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Revision as of 17:24, 15 June 2012
| Name: | squamous epithelium | |
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| Definition: | "Epithelium composed of flattened platelike cells." [Dorlands_Medical_Dictionary:MerckSource] | |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium) |
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Children
| is a: | UBERON:0000487 (simple squamous epithelium),UBERON:0006915 (stratified squamous epithelium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10274-104E4
- 10302-104H5
- 10330-105B6
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11255-116F4 (Sertoli Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006914 (squamous epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
