CL:0000388: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000388
|name=tendon cell
|namespace=cell
|def="A fibrocyte that is part of a tendon." [GOC:tfm]
|xref=
|is_a=CL:0000135;;CL:0000386
|synonym="muscle attach...") |
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|id=CL:0000388 | |id=CL:0000388 | ||
|name=tendon cell | |name=tendon cell | ||
|namespace= | |namespace=efo | ||
|def="A fibrocyte that is part of a tendon." [GOC:tfm] | |def="A fibrocyte that is part of a tendon." [GOC:tfm] | ||
|xref= | |xref= | ||
|is_a=CL:0000135;;CL:0000386 | |is_a=CL:0000135;;CL:0000386;;EFO:0003858 | ||
|synonym="muscle attachment cell" EXACT [];;"tenocyte" RELATED [] | |synonym="muscle attachment cell" EXACT [];;"tenocyte" RELATED [] | ||
|comment= | |comment= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0000043 | |part_of=UBERON:0000043 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:37, 15 June 2012
Name: | tendon cell |
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Namespace: | efo |
Definition: | "A fibrocyte that is part of a tendon." [GOC:tfm] |
Synonyms: |
"muscle attachment cell" EXACT [] "tenocyte" RELATED [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000135(fibrocyte),CL:0000386(attachment cell),EFO:0003858() |
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part_of: | UBERON:0000043(tendon) |
Children
derives from: | FF:0000280 (human tenocyte sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11763-123H8 (tenocyte, donor1)
- 11765-123I1 (tenocyte, donor2)
- 11768-123I4 (tenocyte, donor3)
Mouse (Mus musculus)
- 11763-123H8 (tenocyte, donor1)
- 11765-123I1 (tenocyte, donor2)
- 11768-123I4 (tenocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000388 (tendon cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data