CL:0002306: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002306
|name=epithelial cell of proximal tubule
|namespace=cell
|def="An epithelial cell of the proximal tubule of the kidney." [GOC:tfm, ISBN:1-4160-2328-3]
...") |
No edit summary |
||
| Line 4: | Line 4: | ||
|namespace=cell | |namespace=cell | ||
|def="An epithelial cell of the proximal tubule of the kidney." [GOC:tfm, ISBN:1-4160-2328-3] | |def="An epithelial cell of the proximal tubule of the kidney." [GOC:tfm, ISBN:1-4160-2328-3] | ||
|xref=FMA:62125;;KUPO:0001044 | |xref=FMA:62125;;FMA:70973;;KUPO:0001044 | ||
|is_a=CL:0000239;;CL:0002078;;CL:1000615 | |is_a=CL:0000239;;CL:0002078;;CL:1000615 | ||
|synonym="kidney proximal tubule epithelial cell" EXACT [] | |synonym="kidney proximal tubule epithelial cell" EXACT [] | ||
| Line 20: | Line 20: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0004134 | |part_of=UBERON:0004134 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:40, 15 June 2012
| Name: | epithelial cell of proximal tubule | |
|---|---|---|
| Namespace: | cell | |
| Definition: | "An epithelial cell of the proximal tubule of the kidney." [GOC:tfm, ISBN:1-4160-2328-3] | |
| Xrefs: |
| |
| Synonyms: | "kidney proximal tubule epithelial cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000239(brush border epithelial cell),CL:0002078(meso-epithelial cell),CL:1000615(kidney cortex tubule cell) |
|---|---|
| part_of: | UBERON:0004134(proximal tubule) |
Children
| derives from: | FF:0000155 (human renal proximal tubular epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Mouse (Mus musculus)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002306 (epithelial cell of proximal tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
