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DOID:2438: Difference between revisions

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Latest revision as of 16:32, 26 June 2012

Name:dermis tumor
Namespace:disease_ontology
Xrefs:
links:

NCI:C4475
SNOMEDCT_2010_1_31:254735005

UMLS_CUI:C0346041
Synonyms: "neoplasm of Dermis" EXACT [NCI2004_11_17:C4475]
"tumor of dermis (disorder)" EXACT [SNOMEDCT_2005_07_31:254735005]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3165(skin benign neoplasm)



Children


is a:DOID:4418 (cutaneous fibrous histiocytoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Mouse (Mus musculus)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2438 (dermis tumor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_b4b8800a8deb9c7b661cfa65e8fd6712p@chr11:101742272..101742276, -
5.42e-195FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_b4b8800a8deb9c7b661cfa65e8fd6712p1@CU687665
5.42e-195FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_b4b8800a8deb9c7b661cfa65e8fd6712p@chr11:101742272..101742276, -
5.42e-195FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_b4b8800a8deb9c7b661cfa65e8fd6712p1@CU687665
9.37e-99FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr5:14034644..14034647, -
9.37e-99FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr18:71197490..71197495, -
9.37e-99FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr11:81551043..81551054, -
9.37e-99FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr11:81551043..81551054, -
9.37e-99FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr18:71197490..71197495, -
9.37e-99FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_1d3b6fb1ccc83408329d442635c44b3bp@chr5:14034644..14034647, -
2.55e-98FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_9a2f55f6445514c027967af5a2fecba6p@chr4:34480309..34480321, -
2.55e-98FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_9a2f55f6445514c027967af5a2fecba6p@chr5:23952305..23952310, +
2.55e-98FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_9a2f55f6445514c027967af5a2fecba6p@chr3:45174403..45174415, +
2.55e-98FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_9a2f55f6445514c027967af5a2fecba6p@chr3:106393655..106393659, +
2.55e-98FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_9a2f55f6445514c027967af5a2fecba6p@chr4:34480309..34480321, -
2.55e-98FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_9a2f55f6445514c027967af5a2fecba6p@chr3:45174403..45174415, +
2.55e-98FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_9a2f55f6445514c027967af5a2fecba6p@chr3:106393655..106393659, +
2.55e-98FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_9a2f55f6445514c027967af5a2fecba6p@chr5:23952305..23952310, +
1.23e-66FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_3f66beedf64167dbb6ef6606d5501c66p@chr7:119353807..119353812, -
1.23e-66FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_3f66beedf64167dbb6ef6606d5501c66p1@ENST00000508790
1.23e-66FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_3f66beedf64167dbb6ef6606d5501c66p@chr7:119353807..119353812, -
1.23e-66FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_3f66beedf64167dbb6ef6606d5501c66p1@ENST00000508790
2.39e-66FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_10e84df2fd1acd84c7d8884b7a76035ep1@USP26
2.39e-66FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_10e84df2fd1acd84c7d8884b7a76035ep@chr8:15939682..15939688, +
2.39e-66FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_10e84df2fd1acd84c7d8884b7a76035ep@chr10:37004821..37004852, -
2.39e-66FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_10e84df2fd1acd84c7d8884b7a76035ep@chr10:37004821..37004852, -
2.39e-66FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_10e84df2fd1acd84c7d8884b7a76035ep@chr8:15939682..15939688, +
2.39e-66FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_10e84df2fd1acd84c7d8884b7a76035ep1@USP26
4.66e-66FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_8d152078f66c3118051999c391881364p@chr11:84019133..84019135, -
4.66e-66FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_8d152078f66c3118051999c391881364p@chr11:84019133..84019135, -
1.46e-50FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_fca546df84d7dcdd07071dd0d44fac06p@chr5:27723923..27723927, -
1.46e-50FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_fca546df84d7dcdd07071dd0d44fac06p@chr11:81549961..81549965, -
1.46e-50FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_fca546df84d7dcdd07071dd0d44fac06p@chr11:81549961..81549965, -
1.46e-50FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_fca546df84d7dcdd07071dd0d44fac06p@chr5:27723923..27723927, -
2.42e-50FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_4d66da6d427578dc6b5d51294d167b5cp@chrX:124347061..124347063, -
2.42e-50FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_4d66da6d427578dc6b5d51294d167b5cp1@TFDP3
2.42e-50FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_4d66da6d427578dc6b5d51294d167b5cp@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_4d66da6d427578dc6b5d51294d167b5cp@chrX:124347061..124347063, -
2.42e-50FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_4d66da6d427578dc6b5d51294d167b5cp@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_4d66da6d427578dc6b5d51294d167b5cp1@TFDP3
6.58e-50FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_37bbf15c063a76877ad926b15f12c25fp@chr7:12997533..12997536, +
6.58e-50FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_37bbf15c063a76877ad926b15f12c25fp@chr7:12997533..12997536, +
6.62e-41FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_c570490daafc38183be1e158ba7a1e66p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_c570490daafc38183be1e158ba7a1e66p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_c570490daafc38183be1e158ba7a1e66p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_c570490daafc38183be1e158ba7a1e66p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_c570490daafc38183be1e158ba7a1e66p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_c570490daafc38183be1e158ba7a1e66p@chr12:127737083..127737103, -
9.91e-41FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_700ee012a58e06474c1ae78543779587p3@ZNF812
9.91e-41FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_700ee012a58e06474c1ae78543779587p@chr9:118595109..118595124, +
9.91e-41FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_700ee012a58e06474c1ae78543779587p@chr9:118595109..118595124, +
9.91e-41FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_700ee012a58e06474c1ae78543779587p3@ZNF812
9.91e-41FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_700ee012a58e06474c1ae78543779587p@chr13:87732242..87732246, -
9.91e-41FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_700ee012a58e06474c1ae78543779587p@chr13:87732242..87732246, -
1.48e-40FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_ac9ec9d9cefb4758d2b014c7efa46ca8p2@SPANXC
1.48e-40FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_ac9ec9d9cefb4758d2b014c7efa46ca8p2@SPANXC
3.3e-40FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr18:63273310..63273317, +
3.3e-40FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr8:76774227..76774234, +
3.3e-40FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr18:63273310..63273317, +
3.3e-40FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_fb35ddbaf4a2f2ff0051f9130d30ed52p@chr8:76774227..76774234, +
1.84e-34FFCP PHASE2:Hg19::chr13:87778457..87778464,+#_a6322b4d06bda3f4da02964caa1e4fdep@chr13:87778457..87778464, +
1.84e-34FFCP PHASE1:Hg19::chr13:87778457..87778464,+#_a6322b4d06bda3f4da02964caa1e4fdep@chr13:87778457..87778464, +
1.84e-34FFCP PHASE2:Hg19::chr3:94657049..94657061,+#_a6322b4d06bda3f4da02964caa1e4fdep1@ENST00000462219
1.84e-34FFCP PHASE1:Hg19::chr3:94657049..94657061,+#_a6322b4d06bda3f4da02964caa1e4fdep1@ENST00000462219
3.61e-34FFCP PHASE1:Hg19::chrX:148793752..148793763,+#_4c3024d8857853bb66dedfd669e23ee9p3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr3:79552183..79552188,+#_4c3024d8857853bb66dedfd669e23ee9p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chrX:148793752..148793763,+#_4c3024d8857853bb66dedfd669e23ee9p3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr8:88823985..88824001,-#_4c3024d8857853bb66dedfd669e23ee9p@chr8:88823985..88824001, -
3.61e-34FFCP PHASE2:Hg19::chr3:79552183..79552188,+#_4c3024d8857853bb66dedfd669e23ee9p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chr8:88823985..88824001,-#_4c3024d8857853bb66dedfd669e23ee9p@chr8:88823985..88824001, -
5.05e-34FFCP PHASE2:Hg19::chr7:22136603..22136614,+#_aba52dd6abc1e1f058825a0e8dbee354p@chr7:22136603..22136614, +
5.05e-34FFCP PHASE1:Hg19::chr6:66708902..66708907,-#_aba52dd6abc1e1f058825a0e8dbee354p@chr6:66708902..66708907, -
5.05e-34FFCP PHASE2:Hg19::chr6:66708902..66708907,-#_aba52dd6abc1e1f058825a0e8dbee354p@chr6:66708902..66708907, -
5.05e-34FFCP PHASE1:Hg19::chr7:22136603..22136614,+#_aba52dd6abc1e1f058825a0e8dbee354p@chr7:22136603..22136614, +
7.06e-34FFCP PHASE1:Hg19::chr17:53535935..53535939,+#_fc4e956a78a42f166edb82a1428cd714p@chr17:53535935..53535939, +
7.06e-34FFCP PHASE1:Hg19::chr19:54545833..54545844,-#_fc4e956a78a42f166edb82a1428cd714p@chr19:54545833..54545844, -
7.06e-34FFCP PHASE2:Hg19::chr17:53535935..53535939,+#_fc4e956a78a42f166edb82a1428cd714p@chr17:53535935..53535939, +
7.06e-34FFCP PHASE2:Hg19::chr19:54545833..54545844,-#_fc4e956a78a42f166edb82a1428cd714p@chr19:54545833..54545844, -
9.85e-34FFCP PHASE2:Hg19::chr10:2357481..2357493,+#_df373cf9b046577de985383fe1fd21f7p@chr10:2357481..2357493, +
9.85e-34FFCP PHASE1:Hg19::chr10:2357481..2357493,+#_df373cf9b046577de985383fe1fd21f7p@chr10:2357481..2357493, +
9.99e-30FFCP PHASE1:Hg19::chr3:55313580..55313599,-#_c953cbda8287a290810174fa7fdbac12p@chr3:55313580..55313599, -
9.99e-30FFCP PHASE1:Hg19::chrX:141290299..141290303,-#_c953cbda8287a290810174fa7fdbac12p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr13:87781278..87781282,+#_c953cbda8287a290810174fa7fdbac12p@chr13:87781278..87781282, +
9.99e-30FFCP PHASE1:Hg19::chr20:26116623..26116634,+#_c953cbda8287a290810174fa7fdbac12p@chr20:26116623..26116634, +
9.99e-30FFCP PHASE2:Hg19::chr21:17726230..17726234,+#_c953cbda8287a290810174fa7fdbac12p@chr21:17726230..17726234, +
9.99e-30FFCP PHASE1:Hg19::chr13:87781278..87781282,+#_c953cbda8287a290810174fa7fdbac12p@chr13:87781278..87781282, +
9.99e-30FFCP PHASE2:Hg19::chrX:141290299..141290303,-#_c953cbda8287a290810174fa7fdbac12p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr3:55313580..55313599,-#_c953cbda8287a290810174fa7fdbac12p@chr3:55313580..55313599, -
9.99e-30FFCP PHASE2:Hg19::chr20:26116623..26116634,+#_c953cbda8287a290810174fa7fdbac12p@chr20:26116623..26116634, +
9.99e-30FFCP PHASE1:Hg19::chr21:17726230..17726234,+#_c953cbda8287a290810174fa7fdbac12p@chr21:17726230..17726234, +
1.33e-29FFCP PHASE2:Hg19::chr1:4729528..4729537,-#_8b5b35379a1d392ac36a6c11e335e29ep@chr1:4729528..4729537, -
1.33e-29FFCP PHASE1:Hg19::chr6:150217260..150217271,-#_8b5b35379a1d392ac36a6c11e335e29ep6@RAET1E
1.33e-29FFCP PHASE1:Hg19::chr1:4729528..4729537,-#_8b5b35379a1d392ac36a6c11e335e29ep@chr1:4729528..4729537, -
1.33e-29FFCP PHASE2:Hg19::chr6:150217260..150217271,-#_8b5b35379a1d392ac36a6c11e335e29ep6@RAET1E

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