DOID:5662: Difference between revisions
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|name=pleomorphic carcinoma | |name=pleomorphic carcinoma | ||
|namespace=disease_ontology | |namespace=disease_ontology | ||
|def="A carcinoma that is consisting of spindle or giant cells (or both) combined with squamous cell carcinoma, adenocarcinoma, or large-cell carcinoma." [url:http | |def="A carcinoma that is consisting of spindle or giant cells (or both) combined with squamous cell carcinoma, adenocarcinoma, or large-cell carcinoma." [url:http://ats.ctsnetjournals.org/cgi/content/full/78/5/1742] | ||
|xref=NCI:C4094;;SNOMEDCT_2010_1_31:16741004;;UMLS_CUI:C0334233 | |xref=NCI:C4094;;SNOMEDCT_2010_1_31:16741004;;UMLS_CUI:C0334233 | ||
|is_a=DOID:305 | |is_a=DOID:305 | ||
Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= |
Revision as of 16:33, 26 June 2012
Name: | pleomorphic carcinoma | ||
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Namespace: | disease_ontology | ||
Definition: | "A carcinoma that is consisting of spindle or giant cells (or both) combined with squamous cell carcinoma, adenocarcinoma, or large-cell carcinoma." [url:http://ats.ctsnetjournals.org/cgi/content/full/78/5/1742] | ||
Xrefs: |
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Synonyms: | "Pleomorphic carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:16741004] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:305(carcinoma) |
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Children
is a: | FF:10706-109H4 (pleomorphic hepatocellular carcinoma cell line:SNU-387),FF:10746-110C8 () |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10706-109H4 (pleomorphic hepatocellular carcinoma cell line:SNU-387)
- 10746-110C8
Mouse (Mus musculus)
- 10706-109H4 (pleomorphic hepatocellular carcinoma cell line:SNU-387)
- 10746-110C8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5662 (pleomorphic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE2:Hg19::chr11:66800552..66800553,+#_45bec2167057bc6b488cb53b856e686b | p@chr11:66800552..66800553, + |
5.42e-195 | FFCP PHASE1:Hg19::chr6:55911444..55911446,-#_45bec2167057bc6b488cb53b856e686b | p@chr6:55911444..55911446, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:224716955..224716961,+#_45bec2167057bc6b488cb53b856e686b | p30@CNIH3 |
5.42e-195 | FFCP PHASE1:Hg19::chr11:66800552..66800553,+#_45bec2167057bc6b488cb53b856e686b | p@chr11:66800552..66800553, + |
5.42e-195 | FFCP PHASE1:Hg19::chr1:224716919..224716927,+#_45bec2167057bc6b488cb53b856e686b | p31@CNIH3 |
5.42e-195 | FFCP PHASE2:Hg19::chr1:224716964..224716967,+#_45bec2167057bc6b488cb53b856e686b | p33@CNIH3 |
5.42e-195 | FFCP PHASE1:Hg19::chr1:224716955..224716961,+#_45bec2167057bc6b488cb53b856e686b | p30@CNIH3 |
5.42e-195 | FFCP PHASE2:Hg19::chr2:147702122..147702148,-#_45bec2167057bc6b488cb53b856e686b | p@chr2:147702122..147702148, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:56803369..56803378,-#_45bec2167057bc6b488cb53b856e686b | p@chr6:56803369..56803378, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:224716964..224716967,+#_45bec2167057bc6b488cb53b856e686b | p33@CNIH3 |
5.42e-195 | FFCP PHASE2:Hg19::chr2:147744107..147744108,-#_45bec2167057bc6b488cb53b856e686b | p@chr2:147744107..147744108, - |
5.42e-195 | FFCP PHASE1:Hg19::chr2:147702122..147702148,-#_45bec2167057bc6b488cb53b856e686b | p@chr2:147702122..147702148, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:56803369..56803378,-#_45bec2167057bc6b488cb53b856e686b | p@chr6:56803369..56803378, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:55911444..55911446,-#_45bec2167057bc6b488cb53b856e686b | p@chr6:55911444..55911446, - |
5.42e-195 | FFCP PHASE1:Hg19::chr2:147744107..147744108,-#_45bec2167057bc6b488cb53b856e686b | p@chr2:147744107..147744108, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:224716919..224716927,+#_45bec2167057bc6b488cb53b856e686b | p31@CNIH3 |
9.37e-99 | FFCP PHASE2:Hg19::chr9:26797561..26797563,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chr9:26797561..26797563, + |
9.37e-99 | FFCP PHASE2:Hg19::chrX:31582142..31582159,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chrX:31582142..31582159, + |
9.37e-99 | FFCP PHASE1:Hg19::chrX:31582142..31582159,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chrX:31582142..31582159, + |
9.37e-99 | FFCP PHASE1:Hg19::chr9:26797561..26797563,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chr9:26797561..26797563, + |
9.37e-99 | FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chr3:106393655..106393659, + |
9.37e-99 | FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_139c49ab863d3c4e1a191d2c246b8538 | p@chr3:106393655..106393659, + |
2.55e-98 | FFCP PHASE2:Hg19::chr5:2430820..2430834,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr5:2430820..2430834, - |
2.55e-98 | FFCP PHASE2:Hg19::chr8:29537193..29537198,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr8:29537193..29537198, - |
2.55e-98 | FFCP PHASE1:Hg19::chr4:128083368..128083415,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr4:128083368..128083415, - |
2.55e-98 | FFCP PHASE1:Hg19::chr5:2430820..2430834,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr5:2430820..2430834, - |
2.55e-98 | FFCP PHASE2:Hg19::chr13:114540830..114540839,+#_7d71738931c21a27b4e3b454cce4e338 | p@chr13:114540830..114540839, + |
2.55e-98 | FFCP PHASE1:Hg19::chr8:29537193..29537198,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr8:29537193..29537198, - |
2.55e-98 | FFCP PHASE1:Hg19::chr13:114540830..114540839,+#_7d71738931c21a27b4e3b454cce4e338 | p@chr13:114540830..114540839, + |
2.55e-98 | FFCP PHASE2:Hg19::chr4:128083368..128083415,-#_7d71738931c21a27b4e3b454cce4e338 | p@chr4:128083368..128083415, - |
1.23e-66 | FFCP PHASE1:Hg19::chr6:56803379..56803390,-#_e00d3963a09d8226307fa59716af8d9e | p@chr6:56803379..56803390, - |
1.23e-66 | FFCP PHASE2:Hg19::chr2:231825896..231825916,-#_e00d3963a09d8226307fa59716af8d9e | p5@GPR55 |
1.23e-66 | FFCP PHASE1:Hg19::chr2:231825896..231825916,-#_e00d3963a09d8226307fa59716af8d9e | p5@GPR55 |
1.23e-66 | FFCP PHASE2:Hg19::chr6:56803379..56803390,-#_e00d3963a09d8226307fa59716af8d9e | p@chr6:56803379..56803390, - |
2.39e-66 | FFCP PHASE2:Hg19::chr7:48284886..48284925,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p@chr7:48284886..48284925, + |
2.39e-66 | FFCP PHASE1:Hg19::chr7:48284886..48284925,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p@chr7:48284886..48284925, + |
2.39e-66 | FFCP PHASE2:Hg19::chr2:234545393..234545403,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p3@UGT1A10 |
2.39e-66 | FFCP PHASE2:Hg19::chr13:107028955..107028963,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p6@LINC00460 |
2.39e-66 | FFCP PHASE1:Hg19::chr2:234545393..234545403,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p3@UGT1A10 |
2.39e-66 | FFCP PHASE1:Hg19::chr13:107028955..107028963,+#_89d41fbd7a2fa73e3ef08e8ba185603f | p6@LINC00460 |
4.66e-66 | FFCP PHASE2:Hg19::chr6:124669719..124669754,+#_3c1c9019de609f271f31392f4ff905a8 | p@chr6:124669719..124669754, + |
4.66e-66 | FFCP PHASE1:Hg19::chr6:124669719..124669754,+#_3c1c9019de609f271f31392f4ff905a8 | p@chr6:124669719..124669754, + |
3.99e-50 | FFCP PHASE1:Hg19::chr1:248080919..248080929,+#_28ac947c1fedfa6697a3bd46ccb0f517 | p@chr1:248080919..248080929, + |
3.99e-50 | FFCP PHASE2:Hg19::chr1:248080919..248080929,+#_28ac947c1fedfa6697a3bd46ccb0f517 | p@chr1:248080919..248080929, + |
6.58e-50 | FFCP PHASE2:Hg19::chr8:83603164..83603178,-#_d3135718b0c1af3956980c4f543b1660 | p@chr8:83603164..83603178, - |
6.58e-50 | FFCP PHASE1:Hg19::chr2:29353400..29353413,+#_d3135718b0c1af3956980c4f543b1660 | p28@CLIP4 |
6.58e-50 | FFCP PHASE1:Hg19::chr8:83603164..83603178,-#_d3135718b0c1af3956980c4f543b1660 | p@chr8:83603164..83603178, - |
6.58e-50 | FFCP PHASE2:Hg19::chr10:59633852..59633857,-#_d3135718b0c1af3956980c4f543b1660 | p@chr10:59633852..59633857, - |
6.58e-50 | FFCP PHASE1:Hg19::chr10:59633852..59633857,-#_d3135718b0c1af3956980c4f543b1660 | p@chr10:59633852..59633857, - |
6.58e-50 | FFCP PHASE2:Hg19::chr2:29353400..29353413,+#_d3135718b0c1af3956980c4f543b1660 | p28@CLIP4 |
9.91e-41 | FFCP PHASE2:Hg19::chr5:83381628..83381664,-#_44286236fad916358861b9117291c67f | p@chr5:83381628..83381664, - |
9.91e-41 | FFCP PHASE1:Hg19::chr5:83381628..83381664,-#_44286236fad916358861b9117291c67f | p@chr5:83381628..83381664, - |
1.48e-40 | FFCP PHASE2:Hg19::chr4:166513830..166513834,+#_e7361d0d3d3205ca79244647c8d99714 | p@chr4:166513830..166513834, + |
1.48e-40 | FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_e7361d0d3d3205ca79244647c8d99714 | p@chr9:118595109..118595124, + |
1.48e-40 | FFCP PHASE1:Hg19::chr4:166513830..166513834,+#_e7361d0d3d3205ca79244647c8d99714 | p@chr4:166513830..166513834, + |
1.48e-40 | FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_e7361d0d3d3205ca79244647c8d99714 | p@chr9:118595109..118595124, + |
2.21e-40 | FFCP PHASE2:Hg19::chr7:81093571..81093579,-#_33182a5767aac677125c0119f7932b4e | p@chr7:81093571..81093579, - |
2.21e-40 | FFCP PHASE1:Hg19::chr7:81093571..81093579,-#_33182a5767aac677125c0119f7932b4e | p@chr7:81093571..81093579, - |
2.21e-40 | FFCP PHASE2:Hg19::chrX:73040521..73040536,-#_33182a5767aac677125c0119f7932b4e | p55@XIST |
2.21e-40 | FFCP PHASE1:Hg19::chrX:73040521..73040536,-#_33182a5767aac677125c0119f7932b4e | p55@XIST |
3.3e-40 | FFCP PHASE2:Hg19::chr6:75912602..75912613,-#_f2be54f860f4623f8ce310db3558f13e | p25@COL12A1 |
3.3e-40 | FFCP PHASE1:Hg19::chr6:75912602..75912613,-#_f2be54f860f4623f8ce310db3558f13e | p25@COL12A1 |
3.3e-40 | FFCP PHASE2:Hg19::chr5:39892121..39892134,+#_f2be54f860f4623f8ce310db3558f13e | p@chr5:39892121..39892134, + |
3.3e-40 | FFCP PHASE1:Hg19::chr5:39892121..39892134,+#_f2be54f860f4623f8ce310db3558f13e | p@chr5:39892121..39892134, + |
1.84e-34 | FFCP PHASE2:Hg19::chr3:168808463..168808491,-#_6499391125bff75a2a350a2882bd65e8 | p@chr3:168808463..168808491, - |
1.84e-34 | FFCP PHASE1:Hg19::chr3:168808463..168808491,-#_6499391125bff75a2a350a2882bd65e8 | p@chr3:168808463..168808491, - |
1.84e-34 | FFCP PHASE2:Hg19::chr4:57931763..57931773,-#_6499391125bff75a2a350a2882bd65e8 | p3@ENST00000512512 |
1.84e-34 | FFCP PHASE1:Hg19::chr4:57931763..57931773,-#_6499391125bff75a2a350a2882bd65e8 | p3@ENST00000512512 |
2.58e-34 | FFCP PHASE2:Hg19::chr6:44013424..44013453,-#_78b84b8fcdf2b1cd6947bf6740392b68 | p@chr6:44013424..44013453, - |
2.58e-34 | FFCP PHASE1:Hg19::chr6:44013424..44013453,-#_78b84b8fcdf2b1cd6947bf6740392b68 | p@chr6:44013424..44013453, - |
3.61e-34 | FFCP PHASE2:Hg19::chr2:234545092..234545095,+#_f253911bcbff988d10ddf14ced43ce2f | p2@UGT1A10 |
3.61e-34 | FFCP PHASE1:Hg19::chr2:234545092..234545095,+#_f253911bcbff988d10ddf14ced43ce2f | p2@UGT1A10 |
7.06e-34 | FFCP PHASE2:Hg19::chr18:26941884..26941895,-#_9d14da16fb1acdec6f7772a2b9fcf4e0 | p@chr18:26941884..26941895, - |
7.06e-34 | FFCP PHASE1:Hg19::chr18:26941884..26941895,-#_9d14da16fb1acdec6f7772a2b9fcf4e0 | p@chr18:26941884..26941895, - |
9.85e-34 | FFCP PHASE2:Hg19::chr1:248080895..248080906,+#_eb3304e73512cda03411956efdafb0b6 | p@chr1:248080895..248080906, + |
9.85e-34 | FFCP PHASE1:Hg19::chr1:248080895..248080906,+#_eb3304e73512cda03411956efdafb0b6 | p@chr1:248080895..248080906, + |
7.48e-30 | FFCP PHASE2:Hg19::chr6:56803460..56803471,-#_5b65fe308fe97d0e586b89dbfc68600f | p@chr6:56803460..56803471, - |
7.48e-30 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_5b65fe308fe97d0e586b89dbfc68600f | p@chr2:12248310..12248334, - |
7.48e-30 | FFCP PHASE1:Hg19::chr6:56803460..56803471,-#_5b65fe308fe97d0e586b89dbfc68600f | p@chr6:56803460..56803471, - |
7.48e-30 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_5b65fe308fe97d0e586b89dbfc68600f | p@chr2:12248310..12248334, - |
7.48e-30 | FFCP PHASE2:Hg19::chr9:101611053..101611084,+#_5b65fe308fe97d0e586b89dbfc68600f | p5@GALNT12 |
7.48e-30 | FFCP PHASE1:Hg19::chr9:101611053..101611084,+#_5b65fe308fe97d0e586b89dbfc68600f | p5@GALNT12 |
9.99e-30 | FFCP PHASE2:Hg19::chr11:105524723..105524726,-#_6ffbcf8af0624de65a047b0a70449872 | p@chr11:105524723..105524726, - |
9.99e-30 | FFCP PHASE2:Hg19::chr10:5075825..5075836,+#_6ffbcf8af0624de65a047b0a70449872 | p@chr10:5075825..5075836, + |
9.99e-30 | FFCP PHASE1:Hg19::chr11:105524723..105524726,-#_6ffbcf8af0624de65a047b0a70449872 | p@chr11:105524723..105524726, - |
9.99e-30 | FFCP PHASE1:Hg19::chr10:5075825..5075836,+#_6ffbcf8af0624de65a047b0a70449872 | p@chr10:5075825..5075836, + |
1.33e-29 | FFCP PHASE2:Hg19::chr10:5075837..5075848,+#_ff5a31db9ef31755eb406cd43c1d5e54 | p@chr10:5075837..5075848, + |
1.33e-29 | FFCP PHASE1:Hg19::chr10:5075837..5075848,+#_ff5a31db9ef31755eb406cd43c1d5e54 | p@chr10:5075837..5075848, + |
1.33e-29 | FFCP PHASE1:Hg19::chr2:218088352..218088357,+#_ff5a31db9ef31755eb406cd43c1d5e54 | p@chr2:218088352..218088357, + |
1.33e-29 | FFCP PHASE2:Hg19::chr2:218088352..218088357,+#_ff5a31db9ef31755eb406cd43c1d5e54 | p@chr2:218088352..218088357, + |
1.78e-29 | FFCP PHASE2:Hg19::chr13:107029290..107029313,+#_c1ea3d2f0b0f779563818e41982acad2 | p3@LINC00460 |
1.78e-29 | FFCP PHASE1:Hg19::chr13:107029290..107029313,+#_c1ea3d2f0b0f779563818e41982acad2 | p3@LINC00460 |
1.78e-29 | FFCP PHASE2:Hg19::chr9:118024784..118024795,-#_c1ea3d2f0b0f779563818e41982acad2 | p@chr9:118024784..118024795, - |
1.78e-29 | FFCP PHASE2:Hg19::chr4:33469155..33469168,+#_c1ea3d2f0b0f779563818e41982acad2 | p@chr4:33469155..33469168, + |
1.78e-29 | FFCP PHASE1:Hg19::chr9:118024784..118024795,-#_c1ea3d2f0b0f779563818e41982acad2 | p@chr9:118024784..118024795, - |
1.78e-29 | FFCP PHASE1:Hg19::chr4:33469155..33469168,+#_c1ea3d2f0b0f779563818e41982acad2 | p@chr4:33469155..33469168, + |
2.37e-29 | FFCP PHASE2:Hg19::chr1:8935427..8935438,-#_8ae5a904a28400244cfbefe9af1ee868 | p28@ENO1 |
2.37e-29 | FFCP PHASE1:Hg19::chr1:8935427..8935438,-#_8ae5a904a28400244cfbefe9af1ee868 | p28@ENO1 |
3.16e-29 | FFCP PHASE2:Hg19::chr5:86564593..86564604,+#_c5852aa9da41e39eaec0c8365e1c6f1c | p13@RASA1 |
3.16e-29 | FFCP PHASE1:Hg19::chr5:86564593..86564604,+#_c5852aa9da41e39eaec0c8365e1c6f1c | p13@RASA1 |