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|namespace=
|namespace=
|def="First portion of the digestive tract[WP]. The portion of the digestive that develops from the stomodeum" [Wikipedia:Mouth]
|def="First portion of the digestive tract[WP]. The portion of the digestive that develops from the stomodeum" [Wikipedia:Mouth]
|xref=AAO:0010355;;BTO:0001090;;EFO:0000825;;FBbt:00003126;;FMA:49184;;GAID:75;;galen:Mouth;;http://upload.wikimedia.org/wikipedia/commons/thumb/d/d4/Illu01_head_neck.jpg/200px-Illu01_head_neck.jpg;;MA:0002474;;MAT:0000038;;MESH:A.01.456.505.631;;MIAA:0000038;;OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA;;TADS:0000040;;TAO:0000547;;TGMA:0000131;;VHOG:0000812;;XAO:0003029;;ZFA:0000547
|xref=AAO:0010355;;BTO:0001090;;EFO:0000825;;FBbt:00003126;;FMA:49184;;GAID:75;;galen:Mouth;;http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg;;http://upload.wikimedia.org/wikipedia/commons/thumb/d/d4/Illu01_head_neck.jpg/200px-Illu01_head_neck.jpg;;MA:0002474;;MAT:0000038;;MESH:A.01.456.505.631;;MIAA:0000038;;OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA;;TADS:0000040;;TAO:0000547;;TGMA:0000131;;VHOG:0000812;;XAO:0003029;;ZFA:0000547
|is_a=UBERON:0001444;;UBERON:0004119;;UBERON:0004121
|is_a=UBERON:0001444;;UBERON:0004119;;UBERON:0004121
|synonym="adult mouth" EXACT [];;"cavitas oris" RELATED [BTO:0001090];;"cavum oris" RELATED [BTO:0001090];;"mouth cavity" RELATED [BTO:0001090];;"oral vestibule" RELATED [BTO:0001090];;"regio oralis" EXACT [FMA:49184, FMA:TA];;"rima oris" RELATED [BTO:0001090];;"stoma" RELATED [];;"vestibule of mouth" RELATED [BTO:0001090];;"vestibulum oris" RELATED [BTO:0001090]
|synonym="adult mouth" EXACT [];;"cavitas oris" RELATED [BTO:0001090];;"cavum oris" RELATED [BTO:0001090];;"mouth cavity" RELATED [BTO:0001090];;"oral vestibule" RELATED [BTO:0001090];;"os, cavital oralis" RELATED LATIN [Wikipedia:Mouth];;"regio oralis" EXACT [FMA:49184, FMA:TA];;"rima oris" RELATED [BTO:0001090];;"stoma" RELATED [];;"vestibule of mouth" RELATED [BTO:0001090];;"vestibulum oris" RELATED [BTO:0001090]
|comment=TODO - check fly mouthpart. note in uberon we distinguish between the mouth and the oral opening. the mouth is part of the digestive tract. TODO - check isa parent subdivision of head - is it a subdivision of the head or digestive tract
|comment=TODO - check fly mouthpart. note in uberon we distinguish between the mouth and the oral opening. the mouth is part of the digestive tract. TODO - check isa parent subdivision of head - is it a subdivision of the head or digestive tract
|alt_id=
|alt_id=
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|obo_creation_date=
|obo_creation_date=
|subset=major_organ;;uberon_slim;;vertebrate_core
|subset=major_organ;;uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000930
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0001555
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 16:56, 26 June 2012

Name:mouth
Definition:"First portion of the digestive tract[WP]. The portion of the digestive that develops from the stomodeum" [Wikipedia:Mouth]
Xrefs:
links:

AAO:0010355
BTO:0001090
EFO:0000825
FBbt:00003126
FMA:49184
GAID:75
galen:Mouth
[1]
[2]
MA:0002474
MAT:0000038
MESH:A.01.456.505.631
MIAA:0000038
OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA
TADS:0000040
TAO:0000547
TGMA:0000131
VHOG:0000812
XAO:0003029

ZFA:0000547
Synonyms: "adult mouth" EXACT []
"cavitas oris" RELATED [BTO:0001090]
"cavum oris" RELATED [BTO:0001090]
"mouth cavity" RELATED [BTO:0001090]
"oral vestibule" RELATED [BTO:0001090]
"os, cavital oralis" RELATED LATIN [Wikipedia:Mouth]
"regio oralis" EXACT [FMA:49184, FMA:TA]
"rima oris" RELATED [BTO:0001090]
"stoma" RELATED []
"vestibule of mouth" RELATED [BTO:0001090]
"vestibulum oris" RELATED [BTO:0001090]
Comments:TODO - check fly mouthpart. note in uberon we distinguish between the mouth and the oral opening. the mouth is part of the digestive tract. TODO - check isa parent subdivision of head - is it a subdivision of the head or digestive tract
Subset: major_organ
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001444(subdivision of head),UBERON:0004119(endoderm-derived structure),UBERON:0004121(ectoderm-derived structure)



Children

part of:UBERON:0000166 (oral opening),UBERON:0000167 (oral cavity),UBERON:0001723 (tongue),UBERON:0003729 (mouth mucosa),UBERON:0010047 (oral gland),UBERON:0010056 (future tongue),UBERON:0011595 (jaw region)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000165 (mouth), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.