Personal tools

UBERON:0003134: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=organ_slim
|subset=organ_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0000474;;UBERON:0003100
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:03, 26 June 2012

Name:female reproductive organ
Definition:"A female organ involved in reproduction" [UBERON:xp]
Xrefs:
links:

EMAPA:17959

MA:0000544
Synonyms: "female organism reproductive organ" EXACT [OBOL:automatic]
"female organism reproductive structure" EXACT [OBOL:automatic]
"female organism reproductive system organ" EXACT [OBOL:automatic]
"female organism sex organ" EXACT [OBOL:automatic]
"female reproductive system organ" EXACT []
"female sex organ" EXACT []
"reproductive organ of female organism" EXACT [OBOL:automatic]
"reproductive structure of female organism" EXACT [OBOL:automatic]
"reproductive system organ of female organism" EXACT [OBOL:automatic]
"sex organ of female organism" EXACT [OBOL:automatic]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003133(reproductive organ)



Children

is a:UBERON:0000992 (female gonad),UBERON:0003975 (internal female genitalia),UBERON:0005056 (external female genitalia),FF:10689-109F5 (mixed mullerian tumor cell line:HTMMT)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003134 (female reproductive organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003134&oldid=1835849"