UBERON:0003975: Difference between revisions
From FANTOM5_SSTAR
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|obo_creation_date= | |obo_creation_date= | ||
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|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 17:04, 26 June 2012
| Name: | internal female genitalia | |
|---|---|---|
| Definition: | "the internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina." [MP:0009209] | |
| Xrefs: |
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| Synonyms: |
"female internal genitalia" EXACT [FMA:45654] "internal female genital organ" EXACT [BTO:0003099] "internal genitalia of female reproductive system" EXACT [OBOL:automatic] "organa genitalia feminina interna" RELATED [BTO:0003099] | |
| Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003134(female reproductive organ),UBERON:0004175(internal genitalia) |
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Children
| is a: | UBERON:0006834 (uterus or analog) |
|---|---|
| part of: | UBERON:0000996 (vagina) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10013-101C4 (cervix, adult, pool1)
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10569-108B2 (leiomyoma cell line:10964C)
... further results Mouse (Mus musculus)
- 10013-101C4 (cervix, adult, pool1)
- 10100-102D1 (uterus, adult, pool1)
- 10204-103F6 (vagina, adult)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10569-108B2 (leiomyoma cell line:10964C)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003975 (internal female genitalia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
