UBERON:0004457: Difference between revisions

Revision as of 17:05, 26 June 2012

cavity lining

Xrefs:

Ontology association Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies. link to ontology dataset data

Parents

is_a:	UBERON:0004458(body cavity or lining),UBERON:0004923(organ component layer)

Children

is a:	UBERON:0000042 (serous membrane)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

10276-104E6
10304-104H7
10332-105B8
10441-106E9 (synovial sarcoma cell line:HS-SY-II)
11291-117A4 (Synoviocyte, donor1)
11329-117E6 (Preadipocyte - omental, donor2)
11368-117I9 (Synoviocyte, donor2)
11403-118D8 (Preadipocyte - omental, donor3)
11440-118H9 (Synoviocyte, donor3)
11468-119C1 (Preadipocyte - omental, donor1)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004457 (cavity lining), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
1.36e-86	FFCP PHASE2:Mm9::chr19:45161527..45161539,+	p@chr19:45161527..45161539, +
1.36e-86	FFCP PHASE1:Mm9::chr19:45161527..45161539,+	p@chr19:45161527..45161539, +
4.43e-82	FFCP PHASE1:Hg19::chr18:20122740..20122747,+	p@chr18:20122740..20122747, +
4.43e-82	FFCP PHASE2:Hg19::chr18:20122740..20122747,+	p@chr18:20122740..20122747, +
1.01e-74	FFCP PHASE2:Mm9::chr19:45224323..45224368,+	p@chr19:45224323..45224368, +
1.01e-74	FFCP PHASE1:Mm9::chr19:45224323..45224368,+	p@chr19:45224323..45224368, +
2.48e-72	FFCP PHASE1:Mm9::chr13:108293519..108293533,-	p@chr13:108293519..108293533, -
2.48e-72	FFCP PHASE2:Mm9::chr13:108293519..108293533,-	p@chr13:108293519..108293533, -
1.35e-65	FFCP PHASE1:Mm9::chr19:42116119..42116133,+	p@chr19:42116119..42116133, +
1.35e-65	FFCP PHASE2:Mm9::chr19:42116119..42116133,+	p@chr19:42116119..42116133, +
4.13e-51	FFCP PHASE2:Hg19::chr15:39087815..39087824,-	p@chr15:39087815..39087824, -
4.13e-51	FFCP PHASE1:Hg19::chr15:39087815..39087824,-	p@chr15:39087815..39087824, -
5.59e-50	FFCP PHASE2:Hg19::chr7:73484112..73484119,+	p43@ELN
5.59e-50	FFCP PHASE1:Hg19::chr7:73484112..73484119,+	p43@ELN
1.09e-46	FFCP PHASE2:Mm9::chr19:45224993..45225027,-	p@chr19:45224993..45225027, -
1.09e-46	FFCP PHASE1:Mm9::chr19:45224993..45225027,-	p@chr19:45224993..45225027, -
1.86e-46	FFCP PHASE2:Mm9::chr2:124537273..124537278,-	p@chr2:124537273..124537278, -
1.86e-46	FFCP PHASE1:Mm9::chr2:124537273..124537278,-	p@chr2:124537273..124537278, -
2.72e-42	FFCP PHASE2:Hg19::chr19:18718172..18718197,+	p@chr19:18718172..18718197, +
2.72e-42	FFCP PHASE1:Hg19::chr19:18718172..18718197,+	p@chr19:18718172..18718197, +
8.75e-42	FFCP PHASE1:Hg19::chr19:18900805..18900820,-	p@chr19:18900805..18900820, -
8.75e-42	FFCP PHASE2:Hg19::chr19:18898355..18898369,+	p@chr19:18898355..18898369, +
8.75e-42	FFCP PHASE1:Hg19::chr19:18898355..18898369,+	p@chr19:18898355..18898369, +
8.75e-42	FFCP PHASE2:Hg19::chr19:18900805..18900820,-	p@chr19:18900805..18900820, -
2.56e-41	FFCP PHASE1:Hg19::chr19:18898324..18898353,+	p@chr19:18898324..18898353, +
2.56e-41	FFCP PHASE2:Hg19::chr19:18898324..18898353,+	p@chr19:18898324..18898353, +
9.04e-41	FFCP PHASE1:Hg19::chr7:37947092..37947121,+	p2@CU691333
9.04e-41	FFCP PHASE2:Hg19::chr7:37947092..37947121,+	p2@CU691333
1.54e-40	FFCP PHASE2:Hg19::chr7:37947182..37947207,-	p@chr7:37947182..37947207, -
1.54e-40	FFCP PHASE1:Hg19::chr7:37947182..37947207,-	p@chr7:37947182..37947207, -
2.32e-40	FFCP PHASE2:Hg19::chr12:8814772..8814786,-	p13@MFAP5
2.32e-40	FFCP PHASE1:Hg19::chr12:8814772..8814786,-	p13@MFAP5
1.42e-39	FFCP PHASE2:Hg19::chr19:18900031..18900054,+	p@chr19:18900031..18900054, +
1.42e-39	FFCP PHASE1:Hg19::chr19:18900031..18900054,+	p@chr19:18900031..18900054, +
1.92e-39	FFCP PHASE1:Mm9::chr10:24966689..24966692,-	p@chr10:24966689..24966692, -
1.92e-39	FFCP PHASE2:Mm9::chr10:24966689..24966692,-	p@chr10:24966689..24966692, -
2.2e-39	FFCP PHASE2:Hg19::chr19:18899114..18899135,-	p@chr19:18899114..18899135, -
2.2e-39	FFCP PHASE1:Hg19::chr19:18899114..18899135,-	p@chr19:18899114..18899135, -
2.54e-39	FFCP PHASE2:Hg19::chr19:18896512..18896527,-	p@chr19:18896512..18896527, -
2.54e-39	FFCP PHASE1:Hg19::chr19:18896512..18896527,-	p@chr19:18896512..18896527, -
1.63e-38	FFCP PHASE1:Hg19::chr15:81242954..81242966,+	p@chr15:81242954..81242966, +
1.63e-38	FFCP PHASE2:Hg19::chr15:81242954..81242966,+	p@chr15:81242954..81242966, +
1.32e-37	FFCP PHASE1:Hg19::chr19:18893611..18893635,-	p1@AK094919
1.32e-37	FFCP PHASE2:Hg19::chr4:112437251..112437278,+	p@chr4:112437251..112437278, +
1.32e-37	FFCP PHASE1:Hg19::chr15:81225699..81225710,+	p26@KIAA1199
1.32e-37	FFCP PHASE2:Hg19::chr15:81225699..81225710,+	p26@KIAA1199
1.32e-37	FFCP PHASE1:Hg19::chr4:112437251..112437278,+	p@chr4:112437251..112437278, +
1.32e-37	FFCP PHASE2:Hg19::chr19:18893611..18893635,-	p1@AK094919
1.34e-37	FFCP PHASE2:Hg19::chr19:18896642..18896656,-	p@chr19:18896642..18896656, -
1.34e-37	FFCP PHASE1:Hg19::chr19:18896642..18896656,-	p@chr19:18896642..18896656, -
5.84e-37	FFCP PHASE2:Hg19::chr19:18899991..18900007,-	p@chr19:18899991..18900007, -
5.84e-37	FFCP PHASE1:Hg19::chr19:18899991..18900007,-	p@chr19:18899991..18900007, -
7.41e-37	FFCP PHASE2:Hg19::chr19:18899076..18899101,-	p@chr19:18899076..18899101, -
7.41e-37	FFCP PHASE1:Hg19::chr19:18899076..18899101,-	p@chr19:18899076..18899101, -
3.25e-36	FFCP PHASE2:Hg19::chr19:18900836..18900848,-	p@chr19:18900836..18900848, -
3.25e-36	FFCP PHASE1:Hg19::chr19:18900836..18900848,-	p@chr19:18900836..18900848, -
1.87e-35	FFCP PHASE1:Hg19::chr19:18899504..18899530,-	p@chr19:18899504..18899530, -
1.87e-35	FFCP PHASE2:Hg19::chr19:18899504..18899530,-	p@chr19:18899504..18899530, -
5.37e-35	FFCP PHASE1:Hg19::chr3:13670704..13670708,+	p@chr3:13670704..13670708, +
5.37e-35	FFCP PHASE2:Hg19::chr3:13670704..13670708,+	p@chr3:13670704..13670708, +
5.88e-35	FFCP PHASE2:Hg19::chr19:18709357..18709369,-	p@chr19:18709357..18709369, -
5.88e-35	FFCP PHASE1:Hg19::chr19:18709357..18709369,-	p@chr19:18709357..18709369, -
6.77e-35	FFCP PHASE1:Hg19::chr7:37947202..37947228,+	p1@CU691333
6.77e-35	FFCP PHASE2:Hg19::chr7:37947202..37947228,+	p1@CU691333
1.12e-34	FFCP PHASE1:Hg19::chr10:105428550..105428555,-	p25@SH3PXD2A
1.12e-34	FFCP PHASE2:Hg19::chr10:105428550..105428555,-	p25@SH3PXD2A
1.41e-34	FFCP PHASE2:Hg19::chr19:18893717..18893745,+	p@chr19:18893717..18893745, +
1.41e-34	FFCP PHASE1:Hg19::chr19:18893717..18893745,+	p@chr19:18893717..18893745, +
1.64e-34	FFCP PHASE1:Hg19::chr19:18899247..18899272,-	p@chr19:18899247..18899272, -
1.64e-34	FFCP PHASE2:Hg19::chr19:18899247..18899272,-	p@chr19:18899247..18899272, -
1.9e-34	FFCP PHASE1:Hg19::chr15:81242191..81242201,+	p19@KIAA1199
1.9e-34	FFCP PHASE2:Hg19::chr15:81242191..81242201,+	p19@KIAA1199
2.01e-34	FFCP PHASE2:Hg19::chr19:18896862..18896874,-	p@chr19:18896862..18896874, -
2.01e-34	FFCP PHASE1:Hg19::chr19:18896862..18896874,-	p@chr19:18896862..18896874, -
2.68e-34	FFCP PHASE1:Hg19::chr15:26342114..26342124,+	p@chr15:26342114..26342124, +
2.68e-34	FFCP PHASE2:Hg19::chr15:26342114..26342124,+	p@chr15:26342114..26342124, +
2.85e-34	FFCP PHASE2:Hg19::chr19:18897375..18897390,-	p4@COMP
2.85e-34	FFCP PHASE1:Hg19::chr19:18897375..18897390,-	p4@COMP
4.28e-34	FFCP PHASE2:Mm9::chr14:47707200..47707205,+	p@chr14:47707200..47707205, +
4.28e-34	FFCP PHASE1:Mm9::chr14:47707200..47707205,+	p@chr14:47707200..47707205, +
5.19e-34	FFCP PHASE1:Mm9::chr4:59686875..59686885,+	p@chr4:59686875..59686885, +
5.19e-34	FFCP PHASE2:Mm9::chr4:59686875..59686885,+	p@chr4:59686875..59686885, +
5.98e-34	FFCP PHASE2:Hg19::chr8:22424709..22424716,-	p2@ENST00000517384
5.98e-34	FFCP PHASE2:Hg19::chr9:127260615..127260651,-	p@chr9:127260615..127260651, -
5.98e-34	FFCP PHASE2:Hg19::chr8:47834174..47834213,+	p1@ENST00000524012
5.98e-34	FFCP PHASE2:Hg19::chr11:56859603..56859606,-	p@chr11:56859603..56859606, -
5.98e-34	FFCP PHASE1:Hg19::chr21:28820941..28820952,-	p2@ENST00000420186, p2@uc002ymh.2
5.98e-34	FFCP PHASE2:Hg19::chr7:22259740..22259751,-	p19@RAPGEF5
5.98e-34	FFCP PHASE1:Hg19::chr11:56859608..56859619,-	p@chr11:56859608..56859619, -
5.98e-34	FFCP PHASE1:Hg19::chr8:22436248..22436259,+	p11@PDLIM2
5.98e-34	FFCP PHASE1:Hg19::chr9:133973310..133973321,+	p18@AIF1L
5.98e-34	FFCP PHASE2:Hg19::chr9:127269462..127269484,-	p2@NR5A1
5.98e-34	FFCP PHASE1:Hg19::chr11:925449..925458,+	p17@AP2A2
5.98e-34	FFCP PHASE2:Hg19::chr11:925449..925458,+	p17@AP2A2
5.98e-34	FFCP PHASE2:Hg19::chr1:159172187..159172197,-	p1@uc001ftm.1
5.98e-34	FFCP PHASE1:Hg19::chrX:69645652..69645664,+	p7@GDPD2
5.98e-34	FFCP PHASE1:Hg19::chr9:124516729..124516752,+	p@chr9:124516729..124516752, +
5.98e-34	FFCP PHASE2:Hg19::chr8:22424743..22424759,-	p1@ENST00000517384
5.98e-34	FFCP PHASE1:Hg19::chr6:119812455..119812476,-	p1@uc003pyn.1
5.98e-34	FFCP PHASE1:Hg19::chr1:157811772..157811796,-	p7@CD5L

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UBERON:0004457: Difference between revisions

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Revision as of 17:05, 26 June 2012

Ontology Tree: Loaded from BioPortal

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