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UBERON:0004645: Difference between revisions

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|part_of=UBERON:0001255;;UBERON:0001259
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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Revision as of 17:05, 26 June 2012

Name:urinary bladder urothelium
Xrefs:
links:

BTO:0001694
FMA:15936
MA:0001693
ncithesaurus:Transitional_Epithelium

SCTID:25631003
Synonyms: "bladder transitional cell epithelium" EXACT [FMA:15936]
"transitional epithelium" RELATED [MA:0001693]
"transitional epithelium of urinary bladder" EXACT [FMA:15936]
"urinary bladder transitional epithelium" EXACT [FMA:15936]
"urothelium" BROAD [BTO:0001245]
"urothelium of urinary bladder" EXACT [FMA:15936]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0000365(urothelium),UBERON:0003350(epithelium of mucosa)



Children

derives from:FF:0100792 (urinary bladder cancer cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004645 (urinary bladder urothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data