UBERON:0005733: Difference between revisions
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Latest revision as of 17:06, 26 June 2012
| Name: | limb field |
|---|---|
| Definition: | "A ring of cells capable of forming a limb." [ISBN:9780878932504] |
| Comments: | the central portion of the limb field gives rise to the limb proper. mesenchyme cells proliferate from from the somatic layer of limb field lateral plate mesoderm (limb skeletal precursors) and from the somites (limb muscle precursors) . these mesenchymal cells accumulate under the ectedermal tissue to make a limb bud. |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005732(limb/fin field) |
|---|
Children
| develops from: | UBERON:0004347 (limb bud) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005733 (limb field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_2072b66abe832353d24b34f122c33407 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_2072b66abe832353d24b34f122c33407 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_2072b66abe832353d24b34f122c33407 | p@chr10:97176812..97176813, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_2072b66abe832353d24b34f122c33407 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_2072b66abe832353d24b34f122c33407 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_2072b66abe832353d24b34f122c33407 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_2072b66abe832353d24b34f122c33407 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_2072b66abe832353d24b34f122c33407 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_2072b66abe832353d24b34f122c33407 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_2072b66abe832353d24b34f122c33407 | p@chr10:79759687..79759690, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_2072b66abe832353d24b34f122c33407 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_2072b66abe832353d24b34f122c33407 | p@chr10:97176812..97176813, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_2072b66abe832353d24b34f122c33407 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_2072b66abe832353d24b34f122c33407 | p@chr4:186423235..186423240, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_2072b66abe832353d24b34f122c33407 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_2072b66abe832353d24b34f122c33407 | p@chr4:186423235..186423240, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_2072b66abe832353d24b34f122c33407 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_2072b66abe832353d24b34f122c33407 | p@chr10:79759687..79759690, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:117747577..117747580, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:117747577..117747580, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p104@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p104@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr13:114067922..114067931, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_5a3fa7a23c7cd84e2a273fa9eeb22533 | p@chr13:114067922..114067931, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr5:95180155..95180172, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr10:97037060..97037066, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr2:152566311..152566321, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr21:47769234..47769239, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr10:29918007..29918031, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr22:26299595..26299605, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr2:152590465..152590472, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr5:95180155..95180172, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr18:8608021..8608050, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr2:152590465..152590472, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr21:47769234..47769239, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr3:69168368..69168389, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr2:179656442..179656451, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_da090d5c95003f2cb500e33c527e90f4 | p38@CLIP1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr2:179656442..179656451, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr3:35732964..35732965, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_da090d5c95003f2cb500e33c527e90f4 | p27@CLIP4 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr3:69168368..69168389, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr3:35732964..35732965, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_da090d5c95003f2cb500e33c527e90f4 | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr18:8608021..8608050, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:29398214..29398229,+#_da090d5c95003f2cb500e33c527e90f4 | p27@CLIP4 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_da090d5c95003f2cb500e33c527e90f4 | p@chr6:125535391..125535409, + |
