UBERON:0006518: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:07, 26 June 2012
| Name: | right lung lobe | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "lobe of the right lung" EXACT [ncithesaurus:Lobe_of_the_Right_Lung] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000101(lobe of lung) |
|---|
Children
| is a: | UBERON:0002171 (lower lobe of right lung) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006518 (right lung lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr8:22021803..22021813, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chrX:93772866..93772868, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr8:22021803..22021813, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:211117597..211117606, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85894675..85894679, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81316872..81316887, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81374723..81374726, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr10:81316085..81316090, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p1@ENST00000425887, p1@uc002suw.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr6:32148852..32148862, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p35@SFTPB |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85894638..85894644, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_8b12ccb4d70815ee1587c22d6a59dff0 | p1@ENST00000425887, p1@uc002suw.1 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chr2:85884987..85884992, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_8b12ccb4d70815ee1587c22d6a59dff0 | p@chrX:93772866..93772868, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_2f6b154e64e63208dc097a40e96a27e3 | p12@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_2f6b154e64e63208dc097a40e96a27e3 | p13@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_2f6b154e64e63208dc097a40e96a27e3 | p23@SFTPB |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr6:32149013..32149018, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021482..22021493, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_2f6b154e64e63208dc097a40e96a27e3 | p23@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374819..81374828, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316041..81316047, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_2f6b154e64e63208dc097a40e96a27e3 | p12@SFTPC |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021903..22021951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85894689..85894696, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374313..81374327, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316910..81316917, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_2f6b154e64e63208dc097a40e96a27e3 | p10@ROS1 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316311..81316313, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021526..22021532, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_2f6b154e64e63208dc097a40e96a27e3 | p40@SFTPB |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_2f6b154e64e63208dc097a40e96a27e3 | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_2f6b154e64e63208dc097a40e96a27e3 | p7@AGER |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374752..81374761, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81315944..81315951, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374331..81374339, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_2f6b154e64e63208dc097a40e96a27e3 | p10@ROS1 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:23631651..23631656, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316558..81316565, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021526..22021532, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_2f6b154e64e63208dc097a40e96a27e3 | p40@SFTPB |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316132..81316137, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374587..81374595, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr6:32148869..32148878, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_2f6b154e64e63208dc097a40e96a27e3 | p13@SFTPC |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85894661..85894668, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316753..81316759, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316764..81316776, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_2f6b154e64e63208dc097a40e96a27e3 | p2@ENST00000488425, p2@uc003ejj.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_2f6b154e64e63208dc097a40e96a27e3 | p7@AGER |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85885348..85885355, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22020994..22020998, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374752..81374761, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85886515..85886520, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr8:22021454..22021463, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81316023..81316032, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_2f6b154e64e63208dc097a40e96a27e3 | p@chr2:85889234..85889238, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:81374462..81374469, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_2f6b154e64e63208dc097a40e96a27e3 | p@chr10:23631651..23631656, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:66539483..66539491,+#_7fe0c42b7abd05e7a30ade43271f97c7 | p1@AK127041 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr4:176372622..176372659,-#_7fe0c42b7abd05e7a30ade43271f97c7 | p@chr4:176372622..176372659, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_7fe0c42b7abd05e7a30ade43271f97c7 | p@chr9:77257424..77257435, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr4:176372622..176372659,-#_7fe0c42b7abd05e7a30ade43271f97c7 | p@chr4:176372622..176372659, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:85893752..85893757,-#_7fe0c42b7abd05e7a30ade43271f97c7 | p22@SFTPB |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:85890569..85890576,-#_7fe0c42b7abd05e7a30ade43271f97c7 | p24@SFTPB |
