CL:0000079: Difference between revisions
From FANTOM5_SSTAR
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Revision as of 17:24, 26 June 2012
Name: | stratified epithelial cell |
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Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
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Children
is a: | CL:0000240 (stratified squamous epithelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
Mouse (Mus musculus)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11349-117G8 (Keratinocyte - epidermal, donor2)
- 11421-118F8 (Keratinocyte - epidermal, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000079 (stratified epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data