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|id=CL:0000988
|id=CL:0000988
|name=hematopoietic cell
|name=hematopoietic cell
|namespace=efo
|namespace=cell;;efo
|def="A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add]
|def="A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add]
|xref=BTO:0000574;;FMA:70366;;FMA:83598
|xref=BTO:0000574;;FMA:70366;;FMA:83598
|is_a=CL:0000548;;CL:0002371;;EFO:0000324
|is_a=CL:0000548;;CL:0002371
|synonym="haematopoietic cell" EXACT [];;"haemopoietic cell" EXACT [];;"hemopoietic cell" EXACT []
|synonym="haematopoietic cell" EXACT [];;"haemopoietic cell" EXACT [];;"hemopoietic cell" EXACT []
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:26, 26 June 2012

Name:hematopoietic cell
Namespace:cell;;efo
Definition:"A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add]
Xrefs:
links:

BTO:0000574
FMA:70366

FMA:83598
Synonyms: "haematopoietic cell" EXACT []
"haemopoietic cell" EXACT []
"hemopoietic cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000548(animal cell),CL:0002371(somatic cell)



Children


is a:CL:0000080 (circulating cell),CL:0000081 (blood cell),CL:0000738 (leukocyte),CL:0000763 (myeloid cell),CL:0008001 (hematopoietic precursor cell),CL:1001610 (bone marrow hematopoietic cell)
derives from:FF:0101035 (hematopoietic cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)

... further results Mouse (Mus musculus)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000988 (hematopoietic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data