CL:0000988: Difference between revisions
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|id=CL:0000988 | |id=CL:0000988 | ||
|name=hematopoietic cell | |name=hematopoietic cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add] | |def="A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add] | ||
|xref=BTO:0000574;;FMA:70366;;FMA:83598 | |xref=BTO:0000574;;FMA:70366;;FMA:83598 | ||
|is_a=CL:0000548;;CL:0002371 | |is_a=CL:0000548;;CL:0002371 | ||
|synonym="haematopoietic cell" EXACT [];;"haemopoietic cell" EXACT [];;"hemopoietic cell" EXACT [] | |synonym="haematopoietic cell" EXACT [];;"haemopoietic cell" EXACT [];;"hemopoietic cell" EXACT [] | ||
|comment= | |comment= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:26, 26 June 2012
Name: | hematopoietic cell | |
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Namespace: | cell;;efo | |
Definition: | "A cell of a hematopoietic lineage." [GO_REF:0000031, GOC:add] | |
Xrefs: |
| |
Synonyms: |
"haematopoietic cell" EXACT [] "haemopoietic cell" EXACT [] "hemopoietic cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000548(animal cell),CL:0002371(somatic cell) |
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Children
is a: | CL:0000080 (circulating cell),CL:0000081 (blood cell),CL:0000738 (leukocyte),CL:0000763 (myeloid cell),CL:0008001 (hematopoietic precursor cell),CL:1001610 (bone marrow hematopoietic cell) |
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derives from: | FF:0101035 (hematopoietic cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000988 (hematopoietic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data