UBERON:0000167: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000167
|name=oral cavity
|namespace=
|def=
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA:6970;;EHDAA2:0001324;;EMAPA:17411;;EV:0100057;;FMA:2029...") |
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;; | |xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA2:0001324;;EHDAA:6970;;EMAPA:17411;;EV:0100057;;FMA:20292;;HAO:0000669;;ncithesaurus:Oral_Cavity;;SCTID:181220002;;TAO:0001027;;TGMA:0000102;;VHOG:0000188;;WBbt:0005255;;XAO:0000126;;ZFA:0001027 | ||
|is_a=UBERON:0002553 | |is_a=UBERON:0002553 | ||
|synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | |synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim;;vertebrate_core | |subset=uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0000165 | |part_of=UBERON:0000165 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string | ||
|is_obsolete= | |||
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}} | }} |
Latest revision as of 13:25, 27 June 2012
Name: | oral cavity | |
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Xrefs: |
| |
Synonyms: |
"buccal cavity" EXACT [FMA:20292] "cavity of mouth" EXACT [] | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002553(anatomical cavity) |
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part_of: | UBERON:0000165(mouth) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000167 (oral cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.