Personal tools

UBERON:0001032: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0004456
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 13:27, 27 June 2012

Name:sensory system
Definition:"Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information." [Wikipedia:Sensory_system]
Xrefs:
links:

AAO:0000555
BILA:0000099
EFO:0000805
EHDAA2:0003094
EMAPA:16192
FBbt:00005827
FMA:75259
[ Gray722.png Gray722.png]
[ 200px-Gray722.png 200px-Gray722.png]
MA:0002442
MAT:0000031
MESH:A.09
MIAA:0000031
NIF_GrossAnatomy:nlx_anat_090816
TAO:0000282
XAO:0003194

ZFA:0000282
Synonyms: "organa sensuum" EXACT [FMA:75259, FMA:TA]
"organa sensuum" RELATED LATIN [Wikipedia:Sensory_system]
"sense organ subsystem" EXACT []
"sense organs" EXACT [FMA:75259]
"sense organs set" EXACT [FMA:75259]
"sensory organ system" RELATED []
"sensory subsystem" EXACT []
Comments:note the distinct between entire sensory system and individual system. this reconciles is_a and part_of distinctions between ssAOs
Alt_id: UBERON:FBbt_00005155-FMA_78499-MA_0002442-MIAA_0000031-WBbt_0005832-ZFA_0000282
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system)
part_of:UBERON:0004456(entire sense organ system)



Children

is a:UBERON:0002104 (visual system),UBERON:0002105 (vestibulo-auditory system),UBERON:0004681 (vestibular system),UBERON:0007037 (mechanosensory system)
part of:UBERON:0000020 (sense organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001032 (sensory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.42e-69FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_3b73b4f8018d6a36703b85844c99093cp10@SIX3
4.42e-69FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_3b73b4f8018d6a36703b85844c99093cp10@SIX3
5.33e-65FFCP PHASE1:Mm9::chr17:31818106..31818119,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31818106..31818119, +
5.33e-65FFCP PHASE1:Mm9::chr10:67364011..67364018,-#_97e51647b1d00007bf06ff9fc1727a78p5@Zfp365
5.33e-65FFCP PHASE2:Mm9::chr10:127668442..127668453,+#_97e51647b1d00007bf06ff9fc1727a78p@chr10:127668442..127668453, +
5.33e-65FFCP PHASE1:Mm9::chr11:3622192..3622225,-#_97e51647b1d00007bf06ff9fc1727a78p3@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr4:133799669..133799683,+#_97e51647b1d00007bf06ff9fc1727a78p1@E130218I03Rik
5.33e-65FFCP PHASE2:Mm9::chr17:31818263..31818276,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31818263..31818276, +
5.33e-65FFCP PHASE1:Mm9::chr11:77532283..77532316,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:77532283..77532316, -
5.33e-65FFCP PHASE2:Mm9::chr16:21743134..21743139,-#_97e51647b1d00007bf06ff9fc1727a78p@chr16:21743134..21743139, -
5.33e-65FFCP PHASE1:Mm9::chr4:133799669..133799683,+#_97e51647b1d00007bf06ff9fc1727a78p1@E130218I03Rik
5.33e-65FFCP PHASE1:Mm9::chr17:31815126..31815139,-#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31815126..31815139, -
5.33e-65FFCP PHASE2:Mm9::chr10:67364011..67364018,-#_97e51647b1d00007bf06ff9fc1727a78p5@Zfp365
5.33e-65FFCP PHASE2:Mm9::chr11:77532283..77532316,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:77532283..77532316, -
5.33e-65FFCP PHASE2:Mm9::chr9:89697580..89697585,-#_97e51647b1d00007bf06ff9fc1727a78p1@Mir184
5.33e-65FFCP PHASE1:Mm9::chr16:21743134..21743139,-#_97e51647b1d00007bf06ff9fc1727a78p@chr16:21743134..21743139, -
5.33e-65FFCP PHASE2:Mm9::chr11:3622163..3622187,-#_97e51647b1d00007bf06ff9fc1727a78p8@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr3:129525389..129525400,-#_97e51647b1d00007bf06ff9fc1727a78p@chr3:129525389..129525400, -
5.33e-65FFCP PHASE2:Mm9::chr17:31815126..31815139,-#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31815126..31815139, -
5.33e-65FFCP PHASE1:Mm9::chr11:5876195..5876219,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:5876195..5876219, -
5.33e-65FFCP PHASE2:Mm9::chr17:31818106..31818119,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31818106..31818119, +
5.33e-65FFCP PHASE1:Mm9::chr3:129525389..129525400,-#_97e51647b1d00007bf06ff9fc1727a78p@chr3:129525389..129525400, -
5.33e-65FFCP PHASE2:Mm9::chr11:5876195..5876219,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:5876195..5876219, -
5.33e-65FFCP PHASE1:Mm9::chr17:31817987..31818013,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31817987..31818013, +
5.33e-65FFCP PHASE1:Mm9::chr17:31818263..31818276,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31818263..31818276, +
5.33e-65FFCP PHASE2:Mm9::chr11:3622192..3622225,-#_97e51647b1d00007bf06ff9fc1727a78p3@Osbp2
5.33e-65FFCP PHASE1:Mm9::chr11:77532391..77532408,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:77532391..77532408, -
5.33e-65FFCP PHASE2:Mm9::chr14:118451218..118451221,-#_97e51647b1d00007bf06ff9fc1727a78p4@Dct
5.33e-65FFCP PHASE1:Mm9::chr14:118451218..118451221,-#_97e51647b1d00007bf06ff9fc1727a78p4@Dct
5.33e-65FFCP PHASE2:Mm9::chr17:31817987..31818013,+#_97e51647b1d00007bf06ff9fc1727a78p@chr17:31817987..31818013, +
5.33e-65FFCP PHASE1:Mm9::chr9:89697580..89697585,-#_97e51647b1d00007bf06ff9fc1727a78p1@Mir184
5.33e-65FFCP PHASE1:Mm9::chr2:90827760..90827769,+#_97e51647b1d00007bf06ff9fc1727a78p6@Celf1
5.33e-65FFCP PHASE1:Mm9::chr11:3622163..3622187,-#_97e51647b1d00007bf06ff9fc1727a78p8@Osbp2
5.33e-65FFCP PHASE2:Mm9::chr2:90827760..90827769,+#_97e51647b1d00007bf06ff9fc1727a78p6@Celf1
5.33e-65FFCP PHASE1:Mm9::chr10:127668442..127668453,+#_97e51647b1d00007bf06ff9fc1727a78p@chr10:127668442..127668453, +
5.33e-65FFCP PHASE2:Mm9::chr11:77532391..77532408,-#_97e51647b1d00007bf06ff9fc1727a78p@chr11:77532391..77532408, -
7.33e-60FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_212520ff4cb3ac8d40e59db0cf10ee56p1@ENST00000456467
7.33e-60FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_212520ff4cb3ac8d40e59db0cf10ee56p1@ENST00000456467
9.27e-59FFCP PHASE1:Mm9::chr10:127668637..127668650,+#_ce0ab76f58c6f217616330f553a5c963p3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE1:Mm9::chr7:64675015..64675028,+#_ce0ab76f58c6f217616330f553a5c963p@chr7:64675015..64675028, +
9.27e-59FFCP PHASE2:Mm9::chr10:127668637..127668650,+#_ce0ab76f58c6f217616330f553a5c963p3@LOC100504989, p3@Timeless
9.27e-59FFCP PHASE2:Mm9::chr7:64675015..64675028,+#_ce0ab76f58c6f217616330f553a5c963p@chr7:64675015..64675028, +
1.08e-58FFCP PHASE2:Mm9::chr6:97891135..97891147,+#_18a512c190c6343dd2d10275682fd728p@chr6:97891135..97891147, +
1.08e-58FFCP PHASE2:Mm9::chr2:105509100..105509107,+#_18a512c190c6343dd2d10275682fd728p6@Pax6
1.08e-58FFCP PHASE1:Mm9::chr2:105509100..105509107,+#_18a512c190c6343dd2d10275682fd728p6@Pax6
1.08e-58FFCP PHASE1:Mm9::chr6:97891135..97891147,+#_18a512c190c6343dd2d10275682fd728p@chr6:97891135..97891147, +
1.26e-58FFCP PHASE2:Mm9::chr14:49498256..49498278,+#_f00fc8a26e1754941350d2d099f16576p1@4933429O19Rik
1.26e-58FFCP PHASE1:Mm9::chr14:49498256..49498278,+#_f00fc8a26e1754941350d2d099f16576p1@4933429O19Rik
3.92e-58FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_ad99e93396624e3b61fe12f3f07c19bcp1@ENST00000448923
3.92e-58FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_ad99e93396624e3b61fe12f3f07c19bcp1@ENST00000448923
5.97e-58FFCP PHASE2:Hg19::chr2:45169172..45169177,+#_1d1fa5faf44104bed8628913bb632600p11@SIX3
5.97e-58FFCP PHASE1:Hg19::chr2:45169172..45169177,+#_1d1fa5faf44104bed8628913bb632600p11@SIX3
7.26e-58FFCP PHASE2:Mm9::chr8:77582194..77582219,+#_f83c0bbd928b8e47475feadb917216fap@chr8:77582194..77582219, +
7.26e-58FFCP PHASE1:Mm9::chr5:112688342..112688357,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112688342..112688357, +
7.26e-58FFCP PHASE1:Mm9::chr4:19208009..19208054,+#_f83c0bbd928b8e47475feadb917216fap1@Cngb3
7.26e-58FFCP PHASE2:Mm9::chr1:65149656..65149674,-#_f83c0bbd928b8e47475feadb917216fap2@Cryga
7.26e-58FFCP PHASE1:Mm9::chr6:3944001..3944016,+#_f83c0bbd928b8e47475feadb917216fap1@Gngt1
7.26e-58FFCP PHASE1:Mm9::chr6:85969237..85969247,+#_f83c0bbd928b8e47475feadb917216fap@chr6:85969237..85969247, +
7.26e-58FFCP PHASE2:Mm9::chr3:129525452..129525463,-#_f83c0bbd928b8e47475feadb917216fap3@Rrh
7.26e-58FFCP PHASE2:Mm9::chr6:115162924..115162933,+#_f83c0bbd928b8e47475feadb917216fap@chr6:115162924..115162933, +
7.26e-58FFCP PHASE2:Mm9::chr17:31816514..31816526,+#_f83c0bbd928b8e47475feadb917216fap@chr17:31816514..31816526, +
7.26e-58FFCP PHASE1:Mm9::chr1:65147201..65147212,-#_f83c0bbd928b8e47475feadb917216fap@chr1:65147201..65147212, -
7.26e-58FFCP PHASE2:Mm9::chr11:77532270..77532280,-#_f83c0bbd928b8e47475feadb917216fap@chr11:77532270..77532280, -
7.26e-58FFCP PHASE1:Mm9::chr5:112690963..112690994,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112690963..112690994, +
7.26e-58FFCP PHASE1:Mm9::chr17:31816584..31816600,+#_f83c0bbd928b8e47475feadb917216fap@chr17:31816584..31816600, +
7.26e-58FFCP PHASE2:Mm9::chr5:112688342..112688357,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112688342..112688357, +
7.26e-58FFCP PHASE2:Mm9::chr7:28282354..28282365,+#_f83c0bbd928b8e47475feadb917216fap@chr7:28282354..28282365, +
7.26e-58FFCP PHASE1:Mm9::chr1:38092602..38092616,+#_f83c0bbd928b8e47475feadb917216fap@chr1:38092602..38092616, +
7.26e-58FFCP PHASE1:Mm9::chr2:93906955..93906973,-#_f83c0bbd928b8e47475feadb917216fap2@Hsd17b12
7.26e-58FFCP PHASE1:Mm9::chr15:36655026..36655032,+#_f83c0bbd928b8e47475feadb917216fap@chr15:36655026..36655032, +
7.26e-58FFCP PHASE2:Mm9::chr17:31816584..31816600,+#_f83c0bbd928b8e47475feadb917216fap@chr17:31816584..31816600, +
7.26e-58FFCP PHASE1:Mm9::chr10:127668480..127668491,+#_f83c0bbd928b8e47475feadb917216fap@chr10:127668480..127668491, +
7.26e-58FFCP PHASE1:Mm9::chr3:129525452..129525463,-#_f83c0bbd928b8e47475feadb917216fap3@Rrh
7.26e-58FFCP PHASE2:Mm9::chr4:19208009..19208054,+#_f83c0bbd928b8e47475feadb917216fap1@Cngb3
7.26e-58FFCP PHASE1:Mm9::chr17:31818215..31818239,-#_f83c0bbd928b8e47475feadb917216fap@chr17:31818215..31818239, -
7.26e-58FFCP PHASE2:Mm9::chr6:85969237..85969247,+#_f83c0bbd928b8e47475feadb917216fap@chr6:85969237..85969247, +
7.26e-58FFCP PHASE2:Mm9::chr5:112686483..112686494,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112686483..112686494, +
7.26e-58FFCP PHASE1:Mm9::chr14:35413322..35413333,-#_f83c0bbd928b8e47475feadb917216fap1@Opn4
7.26e-58FFCP PHASE2:Mm9::chr5:112698505..112698537,-#_f83c0bbd928b8e47475feadb917216fap@chr5:112698505..112698537, -
7.26e-58FFCP PHASE1:Mm9::chr10:93761330..93761358,-#_f83c0bbd928b8e47475feadb917216fap1@Gm4792
7.26e-58FFCP PHASE2:Mm9::chr1:65147201..65147212,-#_f83c0bbd928b8e47475feadb917216fap@chr1:65147201..65147212, -
7.26e-58FFCP PHASE2:Mm9::chr14:52730585..52730607,+#_f83c0bbd928b8e47475feadb917216fap1@Rpgrip1
7.26e-58FFCP PHASE1:Mm9::chr1:65147224..65147236,-#_f83c0bbd928b8e47475feadb917216fap@chr1:65147224..65147236, -
7.26e-58FFCP PHASE2:Mm9::chr10:127668480..127668491,+#_f83c0bbd928b8e47475feadb917216fap@chr10:127668480..127668491, +
7.26e-58FFCP PHASE2:Mm9::chr16:56204438..56204451,+#_f83c0bbd928b8e47475feadb917216fap1@Impg2
7.26e-58FFCP PHASE2:Mm9::chr6:3944001..3944016,+#_f83c0bbd928b8e47475feadb917216fap1@Gngt1
7.26e-58FFCP PHASE1:Mm9::chr3:34488839..34488876,+#_f83c0bbd928b8e47475feadb917216fap1@ENSMUST00000173365
7.26e-58FFCP PHASE1:Mm9::chr16:56204438..56204451,+#_f83c0bbd928b8e47475feadb917216fap1@Impg2
7.26e-58FFCP PHASE2:Mm9::chr3:34488839..34488876,+#_f83c0bbd928b8e47475feadb917216fap1@ENSMUST00000173365
7.26e-58FFCP PHASE1:Mm9::chr5:113507470..113507483,-#_f83c0bbd928b8e47475feadb917216fap@chr5:113507470..113507483, -
7.26e-58FFCP PHASE2:Mm9::chr5:113507470..113507483,-#_f83c0bbd928b8e47475feadb917216fap@chr5:113507470..113507483, -
7.26e-58FFCP PHASE1:Mm9::chr17:31817947..31817965,+#_f83c0bbd928b8e47475feadb917216fap@chr17:31817947..31817965, +
7.26e-58FFCP PHASE1:Mm9::chr5:112686483..112686494,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112686483..112686494, +
7.26e-58FFCP PHASE2:Mm9::chr5:113506006..113506025,-#_f83c0bbd928b8e47475feadb917216fap@chr5:113506006..113506025, -
7.26e-58FFCP PHASE2:Mm9::chr5:112675556..112675574,-#_f83c0bbd928b8e47475feadb917216fap@chr5:112675556..112675574, -
7.26e-58FFCP PHASE1:Mm9::chr1:65149656..65149674,-#_f83c0bbd928b8e47475feadb917216fap2@Cryga
7.26e-58FFCP PHASE1:Mm9::chr5:112696408..112696421,-#_f83c0bbd928b8e47475feadb917216fap@chr5:112696408..112696421, -
7.26e-58FFCP PHASE2:Mm9::chr9:107964319..107964338,-#_f83c0bbd928b8e47475feadb917216fap11@Rnf123
7.26e-58FFCP PHASE2:Mm9::chr2:93906955..93906973,-#_f83c0bbd928b8e47475feadb917216fap2@Hsd17b12
7.26e-58FFCP PHASE2:Mm9::chr5:112690963..112690994,+#_f83c0bbd928b8e47475feadb917216fap@chr5:112690963..112690994, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001032&oldid=1837363"