FFCP PHASE1:Hg19::chr2:238322924..238322940,-: Difference between revisions
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|id=chr2:238322924..238322940,- | |id=chr2:238322924..238322940,- | ||
|ontology_enrichment_celltype=CL:0000055!2.09e-37!180;CL:0000057!4.67e-28!75;CL:0000048!1.74e-15!430;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000723!1.72e-14!436;CL:0000183!3.62e-14!59;CL:0000187!4.07e-14!54;CL:0000034!3.13e-13!444;CL:0002620!8.48e-13!23;CL:0000393!3.18e-11!60;CL:0000211!3.18e-11!60;CL:0000192!8.14e-10!42;CL:0000514!8.14e-10!42;CL:0002320!3.62e-08!365;CL:0002570!9.75e-08!8;CL:0002371!1.75e-07!591;CL:0000359!3.28e-07!32;CL:0002334!5.29e-07!12;CL:0002494!9.37e-07!16 | |ontology_enrichment_celltype=CL:0000055!2.09e-37!180;CL:0000057!4.67e-28!75;CL:0000048!1.74e-15!430;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000723!1.72e-14!436;CL:0000183!3.62e-14!59;CL:0000187!4.07e-14!54;CL:0000034!3.13e-13!444;CL:0002620!8.48e-13!23;CL:0000393!3.18e-11!60;CL:0000211!3.18e-11!60;CL:0000192!8.14e-10!42;CL:0000514!8.14e-10!42;CL:0002320!3.62e-08!365;CL:0002570!9.75e-08!8;CL:0002371!1.75e-07!591;CL:0000359!3.28e-07!32;CL:0002334!5.29e-07!12;CL:0002494!9.37e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000723;2.65e-12;61!CL:0000134;4.97e-11;55!CL:0000048;1.27e-10;58!CL:0002570;1.49e-10;8!CL:0002620;4.22e-10;23!CL:0000188;2.03e-08;9!CL:0000057;2.62e-08;73!CL:0000034;2.80e-08;69!CL:0002320;4.37e-08;188!CL:0002540;6.22e-08;6!CL:0002334;4.46e-07;12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.40e-08!14 | |ontology_enrichment_disease=DOID:2394!5.40e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.92e-09;14!DOID:17;7.41e-08;5!DOID:450;7.41e-08;5!DOID:66;7.41e-08;5!DOID:423;7.41e-08;5!DOID:0080000;7.41e-08;5!DOID:11722;7.41e-08;5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.57e-17!83;UBERON:0002329!1.57e-17!83;UBERON:0003077!1.57e-17!83;UBERON:0003059!1.57e-17!83;UBERON:0007282!1.57e-17!83;UBERON:0009618!1.57e-17!83;UBERON:0007285!1.57e-17!83;UBERON:0004290!9.07e-17!70;UBERON:0002385!4.95e-15!63;UBERON:0001015!4.95e-15!63;UBERON:0000383!4.95e-15!63;UBERON:0001134!2.38e-14!61;UBERON:0002036!2.38e-14!61;UBERON:0003082!2.38e-14!61;UBERON:0000486!4.44e-13!82;UBERON:0005256!3.21e-11!143;UBERON:0003102!7.98e-11!95;UBERON:0000948!1.38e-10!24;UBERON:0005498!1.38e-10!24;UBERON:0004140!1.38e-10!24;UBERON:0009881!1.38e-10!24;UBERON:0004141!1.38e-10!24;UBERON:0003084!1.38e-10!24;UBERON:0007005!1.38e-10!24;UBERON:0004139!1.38e-10!24;UBERON:0004291!1.38e-10!24;UBERON:0002199!3.35e-10!45;UBERON:0002416!3.35e-10!45;UBERON:0007100!3.97e-10!27;UBERON:0004872!3.18e-09!84;UBERON:0002384!1.75e-08!375;UBERON:0002100!6.45e-08!216;UBERON:0002097!6.63e-08!40;UBERON:0001009!9.61e-08!113;UBERON:0004535!1.17e-07!110;UBERON:0002049!2.35e-07!79;UBERON:0007798!2.35e-07!79;UBERON:0001013!3.83e-07!14;UBERON:0000475!9.01e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!1.57e-17!83;UBERON:0002329!1.57e-17!83;UBERON:0003077!1.57e-17!83;UBERON:0003059!1.57e-17!83;UBERON:0007282!1.57e-17!83;UBERON:0009618!1.57e-17!83;UBERON:0007285!1.57e-17!83;UBERON:0004290!9.07e-17!70;UBERON:0002385!4.95e-15!63;UBERON:0001015!4.95e-15!63;UBERON:0000383!4.95e-15!63;UBERON:0001134!2.38e-14!61;UBERON:0002036!2.38e-14!61;UBERON:0003082!2.38e-14!61;UBERON:0000486!4.44e-13!82;UBERON:0005256!3.21e-11!143;UBERON:0003102!7.98e-11!95;UBERON:0000948!1.38e-10!24;UBERON:0005498!1.38e-10!24;UBERON:0004140!1.38e-10!24;UBERON:0009881!1.38e-10!24;UBERON:0004141!1.38e-10!24;UBERON:0003084!1.38e-10!24;UBERON:0007005!1.38e-10!24;UBERON:0004139!1.38e-10!24;UBERON:0004291!1.38e-10!24;UBERON:0002199!3.35e-10!45;UBERON:0002416!3.35e-10!45;UBERON:0007100!3.97e-10!27;UBERON:0004872!3.18e-09!84;UBERON:0002384!1.75e-08!375;UBERON:0002100!6.45e-08!216;UBERON:0002097!6.63e-08!40;UBERON:0001009!9.61e-08!113;UBERON:0004535!1.17e-07!110;UBERON:0002049!2.35e-07!79;UBERON:0007798!2.35e-07!79;UBERON:0001013!3.83e-07!14;UBERON:0000475!9.01e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;8.10e-09;22!UBERON:0002384;1.05e-08;198!UBERON:0001013;8.02e-08;14!UBERON:0007100;2.88e-07;25 | |||
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| ||
|short_description=p6@COL6A3 | |short_description=p6@COL6A3 | ||
}} | }} |
Revision as of 05:29, 11 August 2012
Short description: | p6@COL6A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_COL6A3_5end |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | -74bp_to_ENST00000346358, ENST00000347401, ENST00000353578, ENST00000392003, NM_004369, NM_057164, NM_057165, NM_057166, NM_057167, uc002vwl.2, uc002vwo.2, uc002vwq.2, uc002vwr.2, uc010znj.1, uc010znk.1_5end |
EntrezGene: | COL6A3 |
HGNC: | 2213 |
UniProt: | E9PCV6E7ENL6A8MT30D9ZGF2P12111Q63HQ4Q8N4Z1B4E3U5E9PGQ9B7ZMJ7B7ZW00E9PFQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.