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MacroAPE 1083:Motif886: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;105183;0;0!02;105183;0;0;0!03;7933;35777;21834;39639!04;0;0;0;105183!05;0;0;0;105183!06;0;105183;0;0!07;15745;55358;2701;31379 |macroape...")
 
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3-123A1;0.332051!11292-117A5;0.0765364!11369-118A1;0.404746!11441-118I1;0.485903!10007-101B4;0.785716!11520-119H8;1.4653e-06!11600-120H7;0.516753!11681-122H7;0.327368!11216-116B1;0.209037!12179-129A1;0.816844!12180-129A2;0.0129688!12181-129A3;0.0123135!12176-128I7;0.0320135!12177-128I8;0.0164247!12182-129A4;0.0116217!12183-129A5;0.0126827!12184-129A6;0.00872295!10809-111A8;0.0242937!10597-108E3;0.964142!10717-109I6;0.350454!10455-106G5;0.788503!10534-107G3;5.44962e-09!10429-106D6;8.15373e-07!10464-106H5;0.0011731!10827-111C8;3.35346e-07!10789-110H6;3.83942e-06!10828-111C9;1.93731e-07!10788-110H5;8.30457e-05!10792-110H9;0.000358854!10765-110E9;1.08877e-05!10829-111D1;7.31437e-07!10830-111D2;2.79995e-08!10831-111D3;0.000274275!10832-111D4;1.62175e-07!10833-111D5;4.6004e-09!10764-110E8;2.72016e-07!10770-110F5;0.00078674!10399-106A3;0.000125751!10400-106A4;7.16543e-05!10405-106A9;0.000131207!10834-111D6;6.07127e-05!10835-111D7;3.13101e-06!10836-111D8;5.75359e-05!10837-111D9;0.00461039!10699-109G6;0.000173538!10802-111A1;1.53726e-06!10796-110I4;5.22539e-06!10010-101C1;0.699211!10810-111A9;0.00354083!10421-106C7;0.150928!10708-109H6;1.38103e-10!12235-129G3;0.606796!12236-129G4;0.0282233!12237-129G5;0.00398378!10167-103B5;0.0814901!10151-102I7;0.0028003!10428-106D5;0.000168057!10795-110I3;0.566388!10805-111A4;1.68686e-09!10052-101G7;0.763433!10189-103D9;2.36417e-07!10589-108D4;0.265225!10425-106D2;0.575868!10427-106D4;0.215841!10702-109G9;2.71985e-08!10432-106D9;0.0112088!10496-107C1;0.38451!10718-109I7;0.085615!10011-101C2;1.80024e-07!10053-101G8;1.50764e-06!10686-109F2;0.0368863!10084-102B3;0.517696!10012-101C3;5.21389e-05!10085-102B4;0.000443853!10482-107A5;0.00427747!10419-106C5;0.617668!10080-102A8;0.873561!10760-110E4;4.88376e-05!10709-109H7;0.948569!10710-109H8;0.635407!10703-109H1;0.83366!10719-109I8;0.258256!10642-109A3;0.584315!10177-103C6;0.0980203!10164-103B2;0.000550864!10173-103C2;0.000176374!10166-103B4;0.0047088!10083-102B2;0.000176325!10188-103D8;8.52521e-05!10552-107I3;2.61171e-05!10553-107I4;0.0330321!10013-101C4;0.627139!10536-107G5;1.20319e-07!10618-108G6;0.254259!10423-106C9;0.641268!10785-110H2;0.643276!12238-129G6;0.493071!12239-129G7;0.0248728!12240-129G8;0.000224607!10416-106C2;0.470093!10801-110I9;6.82123e-05!10766-110F1;0.000576124!10824-111C5;1.24173e-05!10825-111C6;0.0132154!10826-111C7;0.0209576!10454-106G4;0.00246783!10409-106B4;0.0541615!10638-108I8;0.000263931!10636-108I6;0.228509!10513-107D9;0.660491!10420-106C6;0.56082!10082-102B1;0.981376!10014-101C5;7.75546e-05!10070-101I7;0.000116341!10452-106G2;1.60764e-05!10453-106G3;0.00497919!10449-106F8;0.00130498!10042-101F6;0.000350265!10069-101I6;0.000102741!10193-103E4;4.20323e-07!10631-108I1;0.000533169!10438-106E6;5.27818e-07!10488-107B2;0.986564!10196-103E7;0.0741932!10071-101I8;5.02024e-07!10071-101I8;5.74821e-05!10041-101F5;0.00470678!10451-106G1;0.0410476!10450-106F9;0.367132!10604-108F1;0.826205!10605-108F2;0.296233!10606-108F3;0.412224!10603-108E9;0.185479!10497-107C2;0.0976357!10448-106F7;0.542194!10643-109A4;0.0201847!10426-106D3;0.910167!10431-106D8;0.827316!10197-103E8;0.72369!10443-106F2;1.58712e-10!10815-111B5;0.937178!10816-111B6;0.261164!10817-111B7;0.294907!10015-101C6;0.212192!10410-106B5;4.10778e-06!10054-101G9;0.413455!10758-110E2;1.97289e-10!10711-109H9;2.46039e-06!10040-101F4;2.43259e-07!10470-106I2;0.000800863!10415-106C1;0.303604!10198-103E9;0.608289!10614-108G2;0.000380724!10612-108F9;0.971105!10549-107H9;0.929714!10615-108G3;0.475992!10487-107B1;0.159287!10433-106E1;0.00108137!10688-109F4;0.2757!10444-106F3;0.670928!10444-106F3;0.248073!10485-107A8;0.299727!10413-106B8;0.995618!10175-103C4;0.329043!10161-103A8;0.000415418!12131-128D7;0.00248951!10624-108H3;0.016457!10712-109I1;0.141161!10205-103F7;1.7119e-05!10206-103F8;3.59599e-07!10207-103F9;9.35683e-10!10050-101G5;0.00743567!10051-101G6;2.36425e-10!10016-101C7;2.32935e-11!10046-101G1;3.33383e-08!10778-110G4;6.73951e-07!10633-108I3;0.0186832!10818-111B8;0.21458!10819-111B9;0.641951!10820-111C1;0.622477!10484-107A7;0.636338!10808-111A7;0.80344!10169-103B7;4.69746e-14!10153-102I9;0.00115398!13425-144D5;7.9111e-05!13433-144E4;0.0911995!13437-144E8;0.107465!11904-125F5;0.146041!11905-125F6;0.00206359!10039-101F3;0.0369654!10791-110H8;0.000424974!10017-101C8;0.474172!10045-101F9;0.00124487!10509-107D5;6.24697e-06!10839-111E2;0.348576!10692-109F8;0.310268!10079-102A7;0.553043!10078-102A6;6.7764e-09!10721-110A1;7.63709e-08!10569-108B2;0.729914!10570-108B3;0.0659476!10571-108B4;0.176894!10647-109A8;0.0576182!10752-110D5;0.818619!10782-110G8;3.83176e-06!10726-110A6;0.408701!10018-101C9;0.475395!10086-102B5;0.0510869!10182-103D2;0.000146179!10165-103B3;0.000129352!10499-107C4;0.000377505!10408-106B3;0.703904!10019-101D1;0.948516!10068-101I5;0.0229008!10075-102A3;0.000702272!10077-102A5;0.091281!10727-110A7;0.379517!10775-110G1;1.36143e-06!10412-106B7;3.25096e-07!12231-129F8;0.598101!12232-129F9;0.00717949!12233-129G1;0.0234024!12234-129G2;0.0185776!10414-106B9;0.0283178!10170-103B8;0.936636!10183-103D3;0.0154856!10150-102I6;0.00340402!10174-103C3;0.000445079!10155-103A2;8.34361e-05!10038-101F2;9.22453e-05!10838-111E1;1.60712e-05!10759-110E3;0.0293337!10514-107E1;0.701985!10465-106H6;0.458585!10691-109F7;0.178065!10843-111E6;0.607613!10844-111E7;0.192214!11747-123G1;0.207963!11748-123G2;0.913563!11749-123G3;0.100375!11750-123G4;0.478693!11751-123G5;0.0568252!11840-124H4;0.00892826!11752-123G6;0.00614551!11753-123G7;0.266003!11754-123G8;0.185401!11755-123G9;0.6005!11756-123H1;0.68036!11833-124G6;0.657827!11760-123H5;0.961667!11836-124G9;0.398206!11758-123H3;0.256925!11835-124G8;0.375685!11762-123H7;0.017778!11838-124H2;0.00156591!11757-123H2;0.00603782!11759-123H4;0.679924!11761-123H6;0.540341!11842-124H6;0.0368557!11837-124H1;0.1541!10568-108B1;0.00994372!13230-141I8;0.383309!13231-141I9;0.00938189!10696-109G3;0.00796721!10493-107B7;0.282732!10494-107B8;0.870157!10850-111F4;0.774646!10851-111F5;0.299851!10852-111F6;0.279439!10853-111F7;0.6046!10854-111F8;0.717833!10855-111F9;0.70098!10856-111G1;0.349466!10847-111F1;0.281954!10846-111E9;0.672157!10848-111F2;0.768116!10845-111E8;0.839228!10857-111G2;0.322894!10858-111G3;0.657759!10156-103A3;0.520481!11901-125F2;0.000434331!11902-125F3;0.000725733!11903-125F4;4.78679e-05!10689-109F5;5.8352e-07!10648-109A9;0.733831!10784-110H1;0.852459!10744-110C6;0.186884!10772-110F7;2.19682e-05!10474-106I6;1.53909e-05!10600-108E6;1.69857e-06!10684-109E9;0.624503!12226-129F3;0.850078!12227-129F4;0.585972!10508-107D4;0.000391299!10539-107G8;0.431133!10607-108F4;0.567781!10555-107I6;0.453321!10774-110F9;0.430869!10637-108I7;0.550506!10663-109C6;0.919798!10728-110A8;0.764209!10729-110A9;0.659402!10430-106D7;0.042431!10730-110B1;0.0379628!10813-111B3;0.725363!10812-111B2;0.0145553!10037-101F1;0.0159316!10172-103C1;0.000142382!10163-103B1;0.00541766!10076-102A4;0.000168437!10073-102A1;0.000336235!10036-101E9;0.0218287!10195-103E6;0.000206591!10277-104E7;5.95973e-05!10434-106E2;0.000241003!10550-107I1;0.570349!10545-107H5;0.760592!10544-107H4;0.466009!10704-109H2;0.834607!10510-107D6;0.567507!10558-107I9;0.921478!10020-101D2;0.114791!10732-110B3;3.10597e-06!10049-101G4;0.992485!10698-109G5;0.0597903!10437-106E5;0.491145!10417-106C3;0.772878!10035-101E8;0.823412!10171-103B9;0.000422989!10157-103A4;0.00354753!10034-101E7;0.000522022!10072-101I9;0.000316278!10199-103F1;0.0214694!10200-103F2;0.0417041!10697-109G4;1.6399e-09!10723-110A3;0.588916!10179-103C8;0.781874!10160-103A7;6.84376e-05!10180-103C9;0.00152233!10162-103A9;0.0284647!10021-101D3;0.00293069!10840-111E3;0.000523813!10706-109H4;3.10127e-07!10033-101E6;0.378663!10032-101E5;0.000285665!10490-107B4;0.000541087!10439-106E7;0.851017!10022-101D4;0.425124!10176-103C5;1.80141e-06!10469-106I1;0.000849686!10067-101I4;0.395901!10411-106B6;1.94843e-07!10471-106I3;0.750396!10030-101E3;0.621034!10475-106I7;1.07422e-08!10787-110H4;0.428177!10477-106I9;0.722841!10695-109G2;0.493624!11771-123I7;0.000571129!11772-123I8;0.476113!11773-123I9;0.0876895!10093-102C3;0.0121518!10442-106F1;0.0392178!10442-106F1;0.0996756!10201-103F3;0.236756!10639-108I9;1.92983e-06!11843-124H7;0.244371!11841-124H5;0.752362!10693-109F9;0.490545!10436-106E4;0.949855!10483-107A6;0.70721!10282-104F3;0.478869!10023-101D5;0.00010115!10066-101I3;9.06431e-06!10065-101I2;1.0247e-05!10800-110I8;5.87522e-10!10610-108F7;0.677995!10841-111E4;0.462112!10541-107H1;0.830013!10842-111E5;0.93724!10562-108A4;0.346667!10024-101D6;0.173684!10064-101I1;0.0195993!10609-108F6;0.000156754!10048-101G3;0.438856!10781-110G7;2.68924e-07!10181-103D1;0.462553!10159-103A6;9.99155e-05!10056-101H2;0.00345738!10737-110B8;7.15637e-07!10025-101D7;0.0400591!10044-101F8;0.377406!10424-106D1;0.765721!10463-106H4;4.93211e-07!10616-108G4;0.754754!10486-107A9;0.000770389!10062-101H8;0.0366041!10202-103F4;0.000139736!10158-103A5;0.02644!10441-106E9;0.00917407!10031-101E4;0.526753!10063-101H9;0.000170369!10063-101H9;0.0150436!11763-123H8;1.53733e-05!11765-123I1;0.00163896!11768-123I4;0.000917179!10807-111A6;0.00152843!10790-110H7;0.336391!10798-110I6;0.725376!10786-110H3;0.737439!10591-108D6;0.175156!10593-108D8;0.381257!10590-108D5;0.110992!10026-101D8;0.463307!10096-102C6;2.56732e-09!10168-103B6;0.00158893!10154-103A1;0.000283506!10209-103G2;0.00103544!10061-101H7;2.19668e-07!10027-101D9;2.74664e-08!10043-101F7;0.0401599!10783-110G9;0.649046!10028-101E1;0.710928!10060-101H6;0.00327305!10203-103F5;2.84023e-07!10059-101H5;2.18767e-08!10047-101G2;4.413e-09!10029-101E2;0.619515!10058-101H4;0.00893732!10418-106C4;2.81406e-09!10492-107B6;0.902289!10694-109G1;0.643831!10797-110I5;0.05606!10057-101H3;0.680445!10100-102D1;1.44741e-15!10055-101H1;1.17128e-05!10204-103F6;1.45149e-06!10191-103E2;7.33997e-05!10563-108A5;0.150742
|name=motif886
|name=motif886
|tomtom_result=GABPA#MA0062.2;2;0.000551553;0.262539;0.35831;7;CATTTCC;GCCACTTCCGG;-!STAT1#MA0137.2;0;0.000753739;0.35878;0.35831;7;CATTTCC;CATTTCCCGGAAACC;+!ELF5#MA0136.1;0;0.00272975;1.29936;0.638295;7;CATTTCC;TACTTCCTT;+!CUP2#MA0287.1;0;0.00317544;1.51151;0.638295;7;CATTTCC;CATTTCTGCTG;-!FEV#MA0156.1;-1;0.00349403;1.66316;0.638295;6;CATTTCC;ATTTCCTG;-!SPI1#MA0080.2;-1;0.00402814;1.91739;0.638295;6;CATTTCC;ACTTCCT;-!GABPA#MA0062.2;0;0.00618092;2.94212;0.839505;7;CATTTCC;CTCTTCCGGT;-!TEC1#MA0406.1;1;0.01094;5.20743;0.96279;7;CATTTCC;ACATTCCC;+!YRM1#MA0438.1;-1;0.01094;5.20743;0.96279;6;CATTTCC;ATTTCCGT;-!STAT1#MA0137.2;6;0.011533;5.4897;0.96279;7;CATTTCC;CAGTTTCATTTTCC;-!ELK4#MA0076.1;-1;0.0121519;5.78431;0.96279;6;CATTTCC;ACTTCCGGT;-!znf143#MA0088.1;0;0.0132888;6.32546;0.971874;7;CATTTCC;GATTTCCCATAATGCCTTGC;+
}}
}}

Latest revision as of 12:32, 7 September 2012

Full Name: motif886

Motif matrix
POACGT
01010518300
02105183000
037933357772183439639
04000105183
05000105183
06010518300
071574555358270131379

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
GABPA#MA0062.220.0005515530.2625390.358317CATTTCCGCCACTTCCGG-
STAT1#MA0137.200.0007537390.358780.358317CATTTCCCATTTCCCGGAAACC+
ELF5#MA0136.100.002729751.299360.6382957CATTTCCTACTTCCTT+
CUP2#MA0287.100.003175441.511510.6382957CATTTCCCATTTCTGCTG-
FEV#MA0156.1-10.003494031.663160.6382956CATTTCCATTTCCTG-
SPI1#MA0080.2-10.004028141.917390.6382956CATTTCCACTTCCT-
GABPA#MA0062.200.006180922.942120.8395057CATTTCCCTCTTCCGGT-
TEC1#MA0406.110.010945.207430.962797CATTTCCACATTCCC+
YRM1#MA0438.1-10.010945.207430.962796CATTTCCATTTCCGT-
STAT1#MA0137.260.0115335.48970.962797CATTTCCCAGTTTCATTTTCC-
ELK4#MA0076.1-10.01215195.784310.962796CATTTCCACTTCCGGT-
znf143#MA0088.100.01328886.325460.9718747CATTTCCGATTTCCCATAATGCCTTGC+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif886&oldid=2133688"