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MacroAPE 1083:YCYCTTT,motif332: Difference between revisions

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3;0.916828!10429-106D6;0.87581!10464-106H5;0.928925!10827-111C8;0.800131!10789-110H6;0.611777!10828-111C9;0.58296!10788-110H5;0.948178!10792-110H9;0.995261!10765-110E9;0.402648!10829-111D1;0.88146!10830-111D2;0.467738!10831-111D3;0.478268!10832-111D4;0.235034!10833-111D5;0.625774!10764-110E8;0.721831!10770-110F5;0.669303!10399-106A3;0.310873!10400-106A4;0.543703!10405-106A9;0.532808!10834-111D6;0.517282!10835-111D7;0.78117!10836-111D8;0.881738!10837-111D9;0.427761!10699-109G6;0.31306!10802-111A1;0.534861!10796-110I4;0.108544!10010-101C1;0.612528!10810-111A9;0.144169!10421-106C7;0.388!10708-109H6;0.543019!12235-129G3;0.920624!12236-129G4;0.661401!12237-129G5;0.757339!10167-103B5;0.502747!10151-102I7;0.499967!10428-106D5;0.685249!10795-110I3;0.0484733!10805-111A4;0.457872!10052-101G7;0.826168!10189-103D9;0.309553!10589-108D4;0.265367!10425-106D2;0.152821!10427-106D4;0.317088!10702-109G9;0.512187!10432-106D9;0.883466!10496-107C1;0.548968!10718-109I7;0.0994115!10011-101C2;0.630779!10053-101G8;0.0882678!10686-109F2;0.170441!10084-102B3;0.851858!10012-101C3;0.368802!10085-102B4;0.466055!10482-107A5;0.0554157!10419-106C5;0.273419!10080-102A8;0.806257!10760-110E4;0.0850648!10709-109H7;0.711417!10710-109H8;0.238427!10703-109H1;0.412997!10719-109I8;0.289573!10642-109A3;0.312702!10177-103C6;0.526023!10164-103B2;0.816974!10173-103C2;0.984393!10166-103B4;0.577036!10083-102B2;0.802821!10188-103D8;0.51763!10552-107I3;0.813237!10553-107I4;0.657558!10013-101C4;0.486741!10536-107G5;0.287292!10618-108G6;0.327935!10423-106C9;0.851625!10785-110H2;0.842707!12238-129G6;0.799369!12239-129G7;0.638458!12240-129G8;0.591383!10416-106C2;0.491918!10801-110I9;0.900906!10766-110F1;0.494688!10824-111C5;0.273752!10825-111C6;0.765049!10826-111C7;0.759294!10454-106G4;0.63343!10409-106B4;0.714485!10638-108I8;0.550215!10636-108I6;0.711922!10513-107D9;0.675606!10420-106C6;0.788178!10082-102B1;0.438863!10014-101C5;0.263119!10070-101I7;0.166973!10452-106G2;0.34561!10453-106G3;0.82236!10449-106F8;0.462554!10042-101F6;0.361662!10069-101I6;0.718027!10193-103E4;0.54838!10631-108I1;0.588841!10438-106E6;0.876555!10488-107B2;0.952825!10196-103E7;0.9335!10071-101I8;0.136162!10071-101I8;0.4398!10041-101F5;0.282908!10451-106G1;0.199457!10450-106F9;0.403129!10604-108F1;0.311539!10605-108F2;0.565331!10606-108F3;0.545145!10603-108E9;0.473804!10497-107C2;0.887916!10448-106F7;0.797319!10643-109A4;0.245705!10426-106D3;0.30936!10431-106D8;0.490738!10197-103E8;0.810493!10443-106F2;0.075721!10815-111B5;0.344685!10816-111B6;0.512435!10817-111B7;0.552424!10015-101C6;0.496276!10410-106B5;0.286925!10054-101G9;0.307061!10758-110E2;0.87344!10711-109H9;0.687903!10040-101F4;0.767287!10470-106I2;0.40956!10415-106C1;0.562725!10198-103E9;0.18787!10614-108G2;0.0791954!10612-108F9;0.874947!10549-107H9;0.602855!10615-108G3;0.411674!10487-107B1;0.356213!10433-106E1;0.746674!10688-109F4;0.487281!10444-106F3;0.289322!10444-106F3;0.691854!10485-107A8;0.732139!10413-106B8;0.959911!10175-103C4;0.933001!10161-103A8;0.609824!12131-128D7;0.951206!10624-108H3;0.121583!10712-109I1;0.0701925!10205-103F7;0.685623!10206-103F8;0.282345!10207-103F9;0.380549!10050-101G5;0.230479!10051-101G6;0.960878!10016-101C7;0.643725!10046-101G1;0.479671!10778-110G4;0.929865!10633-108I3;0.550472!10818-111B8;0.914977!10819-111B9;0.675035!10820-111C1;0.716468!10484-107A7;0.6884!10808-111A7;0.337469!10169-103B7;0.947275!10153-102I9;0.496636!13425-144D5;0.79106!13433-144E4;0.209674!13437-144E8;0.172205!11904-125F5;0.197483!11905-125F6;0.628404!10039-101F3;0.686051!10791-110H8;0.371055!10017-101C8;0.790707!10045-101F9;0.355739!10509-107D5;0.778481!10839-111E2;0.419574!10692-109F8;0.641113!10079-102A7;0.802915!10078-102A6;0.35726!10721-110A1;0.405922!10569-108B2;0.888776!10570-108B3;0.421877!10571-108B4;0.462546!10647-109A8;0.72113!10752-110D5;0.261093!10782-110G8;0.734525!10726-110A6;0.330307!10018-101C9;0.426552!10086-102B5;0.503177!10182-103D2;0.337025!10165-103B3;0.672102!10499-107C4;0.909062!10408-106B3;0.468873!10019-101D1;0.645184!10068-101I5;0.350904!10075-102A3;0.523364!10077-102A5;0.325397!10727-110A7;0.161956!10775-110G1;0.785064!10412-106B7;0.832442!12231-129F8;0.647574!12232-129F9;0.5938!12233-129G1;0.791974!12234-129G2;0.615197!10414-106B9;0.464266!10170-103B8;0.285082!10183-103D3;0.414984!10150-102I6;0.418361!10174-103C3;0.705008!10155-103A2;0.864361!10038-101F2;0.896507!10838-111E1;0.75388!10759-110E3;0.783063!10514-107E1;0.357237!10465-106H6;0.508392!10691-109F7;0.778366!10843-111E6;0.103704!10844-111E7;0.91755!11747-123G1;0.253799!11748-123G2;0.455295!11749-123G3;0.35487!11750-123G4;0.26925!11751-123G5;0.900561!11840-124H4;0.704945!11752-123G6;0.556516!11753-123G7;0.396175!11754-123G8;0.626111!11755-123G9;0.364244!11756-123H1;0.655361!11833-124G6;0.238123!11760-123H5;0.108177!11836-124G9;0.0681354!11758-123H3;0.748566!11835-124G8;0.547419!11762-123H7;0.614643!11838-124H2;0.755794!11757-123H2;0.28303!11759-123H4;0.870839!11761-123H6;0.31619!11842-124H6;0.411685!11837-124H1;0.0568768!10568-108B1;0.484635!13230-141I8;0.302673!13231-141I9;0.270978!10696-109G3;0.153458!10493-107B7;0.528555!10494-107B8;0.337548!10850-111F4;0.207035!10851-111F5;0.70922!10852-111F6;0.598075!10853-111F7;0.0911024!10854-111F8;0.657506!10855-111F9;0.741313!10856-111G1;0.877166!10847-111F1;0.660501!10846-111E9;0.431014!10848-111F2;0.605277!10845-111E8;0.958209!10857-111G2;0.0990536!10858-111G3;0.807941!10156-103A3;0.214475!11901-125F2;0.678714!11902-125F3;0.209044!11903-125F4;0.313659!10689-109F5;0.503381!10648-109A9;0.83137!10784-110H1;0.24819!10744-110C6;0.685402!10772-110F7;0.829354!10474-106I6;0.978019!10600-108E6;0.587571!10684-109E9;0.427414!12226-129F3;0.42661!12227-129F4;0.553045!10508-107D4;0.573166!10539-107G8;0.489397!10607-108F4;0.803252!10555-107I6;0.362556!10774-110F9;0.470966!10637-108I7;0.222053!10663-109C6;0.607899!10728-110A8;0.564235!10729-110A9;0.375613!10430-106D7;0.822448!10730-110B1;0.899854!10813-111B3;0.625708!10812-111B2;0.998268!10037-101F1;0.89268!10172-103C1;0.504516!10163-103B1;0.529241!10076-102A4;0.678879!10073-102A1;0.468776!10036-101E9;0.322648!10195-103E6;0.304874!10277-104E7;0.595458!10434-106E2;0.442945!10550-107I1;0.60898!10545-107H5;0.0765194!10544-107H4;0.588879!10704-109H2;0.747113!10510-107D6;0.000405933!10558-107I9;0.105751!10020-101D2;0.808083!10732-110B3;0.42087!10049-101G4;0.206447!10698-109G5;0.0805179!10437-106E5;0.997795!10417-106C3;0.112576!10035-101E8;0.661839!10171-103B9;0.397625!10157-103A4;0.414891!10034-101E7;0.623498!10072-101I9;0.393982!10199-103F1;0.279118!10200-103F2;0.546782!10697-109G4;0.268709!10723-110A3;0.647083!10179-103C8;0.406875!10160-103A7;0.999336!10180-103C9;0.755883!10162-103A9;0.280144!10021-101D3;0.313211!10840-111E3;0.187765!10706-109H4;0.690254!10033-101E6;0.630814!10032-101E5;0.589224!10490-107B4;0.285602!10439-106E7;0.753108!10022-101D4;0.109535!10176-103C5;0.101757!10469-106I1;0.776201!10067-101I4;0.847488!10411-106B6;0.996804!10471-106I3;0.328152!10030-101E3;0.593515!10475-106I7;0.760981!10787-110H4;0.936383!10477-106I9;0.783716!10695-109G2;0.954616!11771-123I7;0.975135!11772-123I8;0.738804!11773-123I9;0.919122!10093-102C3;0.643229!10442-106F1;0.256812!10442-106F1;0.443944!10201-103F3;0.428114!10639-108I9;0.0424848!11843-124H7;0.934623!11841-124H5;0.0106848!10693-109F9;0.0785166!10436-106E4;0.975003!10483-107A6;0.482846!10282-104F3;0.543068!10023-101D5;0.112572!10066-101I3;0.0335589!10065-101I2;0.755464!10800-110I8;0.789277!10610-108F7;0.377048!10841-111E4;0.050988!10541-107H1;0.73165!10842-111E5;0.139709!10562-108A4;0.580406!10024-101D6;0.194285!10064-101I1;0.112645!10609-108F6;0.306196!10048-101G3;0.561068!10781-110G7;0.128472!10181-103D1;0.149018!10159-103A6;0.896107!10056-101H2;0.617172!10737-110B8;0.364362!10025-101D7;0.973551!10044-101F8;0.32914!10424-106D1;0.832712!10463-106H4;0.856467!10616-108G4;0.87098!10486-107A9;0.397742!10062-101H8;0.655234!10202-103F4;0.338697!10158-103A5;0.43037!10441-106E9;0.777821!10031-101E4;0.898085!10063-101H9;0.290628!10063-101H9;0.328304!11763-123H8;0.282905!11765-123I1;0.49584!11768-123I4;0.899888!10807-111A6;0.568417!10790-110H7;0.436982!10798-110I6;0.597645!10786-110H3;0.336046!10591-108D6;0.361554!10593-108D8;0.859682!10590-108D5;0.956751!10026-101D8;0.358804!10096-102C6;0.529123!10168-103B6;0.921797!10154-103A1;0.623939!10209-103G2;0.935327!10061-101H7;0.471598!10027-101D9;0.665965!10043-101F7;0.711615!10783-110G9;0.632343!10028-101E1;0.506307!10060-101H6;0.261377!10203-103F5;0.622904!10059-101H5;0.38041!10047-101G2;0.552703!10029-101E2;0.499451!10058-101H4;0.332509!10418-106C4;0.426539!10492-107B6;0.0600803!10694-109G1;0.960892!10797-110I5;0.908924!10057-101H3;0.52654!10100-102D1;0.346857!10055-101H1;0.250219!10204-103F6;0.678791!10191-103E2;0.145845!10563-108A5;0.417548
|name=YCYCTTT,motif332,CNhs13808,T:2064.0(57.10%),B:31326.1(46.65%),P:1e-35
|name=YCYCTTT,motif332,CNhs13808,T:2064.0(57.10%),B:31326.1(46.65%),P:1e-35
|tomtom_result=AZF1#MA0277.1;2;0.00148766;0.708128;1;7;TCTCTTT;TTTCTTTTT;-!id1#MA0120.1;3;0.00265591;1.26421;1;7;TCTCTTT;TTTTCCTTTTCG;+!FKH1#MA0296.1;1;0.00317993;1.51365;1;7;TCTCTTT;TCCTCTTTGTTTACAATTCA;-!Klf4#MA0039.1;3;0.00696782;3.31668;1;7;TCTCTTT;CCTTCCTTTA;-!RME1#MA0370.1;0;0.00786424;3.74338;1;7;TCTCTTT;TTCCTTTGGA;-!Dof3#MA0021.1;-1;0.0094361;4.49158;1;6;TCTCTTT;CGCTTT;-!Kr#MA0452.1;3;0.0112329;5.34688;1;7;TCTCTTT;TAACCCTTTTG;-!YER130C#MA0423.1;1;0.0112966;5.37718;1;7;TCTCTTT;ACCCCTATT;+!TBP#MA0108.2;4;0.0138556;6.59526;1;7;TCTCTTT;CCCCGCCTTTTATAC;-!TBP#MA0108.2;4;0.0138556;6.59526;1;7;TCTCTTT;CCCCGCCTTTTATAC;-!IRF1#MA0050.1;4;0.0146654;6.98073;1;7;TCTCTTT;GGTTTCACTTTC;-
}}
}}

Latest revision as of 12:58, 7 September 2012

Full Name: YCYCTTT,motif332,CNhs13808,T:2064.0(57.10%),B:31326.1(46.65%),P:1e-35

Motif matrix
POACGT
12.064965.9522.0641093.92
22.0642057.8082.0642.064
32.064980.44.1281077.408
42.0641308.5762.064751.296
52.0642.0642.0642057.808
62.0642.0642.0642057.808
72.0642.0642.0642057.808

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
AZF1#MA0277.120.001487660.70812817TCTCTTTTTTCTTTTT-
id1#MA0120.130.002655911.2642117TCTCTTTTTTTCCTTTTCG+
FKH1#MA0296.110.003179931.5136517TCTCTTTTCCTCTTTGTTTACAATTCA-
Klf4#MA0039.130.006967823.3166817TCTCTTTCCTTCCTTTA-
RME1#MA0370.100.007864243.7433817TCTCTTTTTCCTTTGGA-
Dof3#MA0021.1-10.00943614.4915816TCTCTTTCGCTTT-
Kr#MA0452.130.01123295.3468817TCTCTTTTAACCCTTTTG-
YER130C#MA0423.110.01129665.3771817TCTCTTTACCCCTATT+
TBP#MA0108.240.01385566.5952617TCTCTTTCCCCGCCTTTTATAC-
TBP#MA0108.240.01385566.5952617TCTCTTTCCCCGCCTTTTATAC-
IRF1#MA0050.140.01466546.9807317TCTCTTTGGTTTCACTTTC-
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