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MacroAPE 1083:Motif TCNAGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;10432!02;0;10432;0;0!03;2608;2608;2608;2608!04;10432;0;0;0!05;0;0;10432;0!06;0;0;0;10432 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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0792-110H9;0.825921!10765-110E9;0.88932!10829-111D1;0.877738!10830-111D2;0.558832!10831-111D3;0.37548!10832-111D4;0.96047!10833-111D5;0.328885!10764-110E8;0.833221!10770-110F5;0.59724!10399-106A3;0.775011!10400-106A4;0.95206!10405-106A9;0.974618!10834-111D6;0.882168!10835-111D7;0.607817!10836-111D8;0.526004!10837-111D9;0.657292!10699-109G6;0.570996!10802-111A1;0.937733!10796-110I4;0.620783!10010-101C1;0.301444!10810-111A9;0.563894!10421-106C7;0.672307!10708-109H6;0.544165!12235-129G3;0.92399!12236-129G4;0.755088!12237-129G5;0.732566!10167-103B5;0.51226!10151-102I7;0.593975!10428-106D5;0.55156!10795-110I3;0.683616!10805-111A4;0.597444!10052-101G7;0.857891!10189-103D9;0.779948!10589-108D4;0.485869!10425-106D2;0.976472!10427-106D4;0.314939!10702-109G9;0.493277!10432-106D9;0.893521!10496-107C1;0.846319!10718-109I7;0.950809!10011-101C2;0.983307!10053-101G8;0.509733!10686-109F2;0.110388!10084-102B3;0.735497!10012-101C3;0.590622!10085-102B4;0.605405!10482-107A5;0.725458!10419-106C5;0.598372!10080-102A8;0.969733!10760-110E4;0.117738!10709-109H7;0.328648!10710-109H8;0.313147!10703-109H1;0.392653!10719-109I8;0.923027!10642-109A3;0.100989!10177-103C6;0.820933!10164-103B2;0.799247!10173-103C2;0.593785!10166-103B4;0.555089!10083-102B2;0.536707!10188-103D8;0.423881!10552-107I3;0.676816!10553-107I4;0.758619!10013-101C4;0.294505!10536-107G5;0.424179!10618-108G6;0.0928517!10423-106C9;0.888443!10785-110H2;0.939014!12238-129G6;0.731587!12239-129G7;0.732947!12240-129G8;0.910844!10416-106C2;0.79819!10801-110I9;0.763453!10766-110F1;0.783334!10824-111C5;0.664505!10825-111C6;0.535039!10826-111C7;0.558296!10454-106G4;0.519996!10409-106B4;0.358354!10638-108I8;0.545821!10636-108I6;0.784005!10513-107D9;0.652248!10420-106C6;0.940444!10082-102B1;0.601199!10014-101C5;0.45703!10070-101I7;0.603537!10452-106G2;0.573639!10453-106G3;0.696902!10449-106F8;0.758225!10042-101F6;0.777521!10069-101I6;0.433143!10193-103E4;0.64947!10631-108I1;0.435039!10438-106E6;0.422719!10488-107B2;0.436739!10196-103E7;0.936581!10071-101I8;0.296753!10071-101I8;0.414633!10041-101F5;0.914724!10451-106G1;0.769638!10450-106F9;0.931506!10604-108F1;0.905398!10605-108F2;0.74176!10606-108F3;0.499533!10603-108E9;0.93142!10497-107C2;0.769375!10448-106F7;0.576563!10643-109A4;0.95373!10426-106D3;0.543948!10431-106D8;0.470159!10197-103E8;0.681827!10443-106F2;0.823423!10815-111B5;0.447298!10816-111B6;0.874709!10817-111B7;0.951708!10015-101C6;0.875318!10410-106B5;0.473822!10054-101G9;0.228388!10758-110E2;0.839011!10711-109H9;0.751439!10040-101F4;0.845813!10470-106I2;0.608609!10415-106C1;0.913727!10198-103E9;0.896571!10614-108G2;0.29802!10612-108F9;0.755311!10549-107H9;0.402748!10615-108G3;0.823113!10487-107B1;0.853464!10433-106E1;0.856027!10688-109F4;0.616159!10444-106F3;0.532742!10444-106F3;0.419623!10485-107A8;0.547032!10413-106B8;0.67854!10175-103C4;0.675356!10161-103A8;0.574688!12131-128D7;0.4108!10624-108H3;0.830003!10712-109I1;0.502178!10205-103F7;0.564329!10206-103F8;0.945116!10207-103F9;0.824595!10050-101G5;0.978671!10051-101G6;0.983684!10016-101C7;0.635882!10046-101G1;0.612082!10778-110G4;0.960395!10633-108I3;0.969157!10818-111B8;0.469149!10819-111B9;0.637808!10820-111C1;0.651484!10484-107A7;0.700482!10808-111A7;0.939571!10169-103B7;0.489117!10153-102I9;0.495904!13425-144D5;0.568002!13433-144E4;0.974595!13437-144E8;0.941153!11904-125F5;0.91664!11905-125F6;0.910862!10039-101F3;0.995421!10791-110H8;0.561332!10017-101C8;0.26757!10045-101F9;0.812097!10509-107D5;0.96762!10839-111E2;0.745191!10692-109F8;0.270514!10079-102A7;0.981958!10078-102A6;0.890298!10721-110A1;0.643935!10569-108B2;0.435778!10570-108B3;0.876168!10571-108B4;0.972644!10647-109A8;0.820872!10752-110D5;0.299227!10782-110G8;0.456319!10726-110A6;0.716854!10018-101C9;0.63666!10086-102B5;0.809706!10182-103D2;0.888724!10165-103B3;0.597866!10499-107C4;0.467234!10408-106B3;0.922163!10019-101D1;0.493717!10068-101I5;0.270726!10075-102A3;0.323848!10077-102A5;0.173564!10727-110A7;0.0602591!10775-110G1;0.920148!10412-106B7;0.740669!12231-129F8;0.52263!12232-129F9;0.660148!12233-129G1;0.564095!12234-129G2;0.60787!10414-106B9;0.646318!10170-103B8;0.6609!10183-103D3;0.627716!10150-102I6;0.619367!10174-103C3;0.649521!10155-103A2;0.656925!10038-101F2;0.609462!10838-111E1;0.584659!10759-110E3;0.792984!10514-107E1;0.761487!10465-106H6;0.92577!10691-109F7;0.936589!10843-111E6;0.918277!10844-111E7;0.715572!11747-123G1;0.982446!11748-123G2;0.859273!11749-123G3;0.998036!11750-123G4;0.744823!11751-123G5;0.453522!11840-124H4;0.368481!11752-123G6;0.505369!11753-123G7;0.736505!11754-123G8;0.608205!11755-123G9;0.731802!11756-123H1;0.907394!11833-124G6;0.978976!11760-123H5;0.800687!11836-124G9;0.9291!11758-123H3;0.965976!11835-124G8;0.923018!11762-123H7;0.900965!11838-124H2;0.809783!11757-123H2;0.94184!11759-123H4;0.744537!11761-123H6;0.761872!11842-124H6;0.703524!11837-124H1;0.812955!10568-108B1;0.930205!13230-141I8;0.252463!13231-141I9;0.630672!10696-109G3;0.667002!10493-107B7;0.279849!10494-107B8;0.714263!10850-111F4;0.660615!10851-111F5;0.708783!10852-111F6;0.980136!10853-111F7;0.812122!10854-111F8;0.622263!10855-111F9;0.695433!10856-111G1;0.497926!10847-111F1;0.628993!10846-111E9;0.815229!10848-111F2;0.906992!10845-111E8;0.883603!10857-111G2;0.667699!10858-111G3;0.699574!10156-103A3;0.951993!11901-125F2;0.586269!11902-125F3;0.830624!11903-125F4;0.788633!10689-109F5;0.805595!10648-109A9;0.608528!10784-110H1;0.611526!10744-110C6;0.915009!10772-110F7;0.656069!10474-106I6;0.752649!10600-108E6;0.61163!10684-109E9;0.572791!12226-129F3;0.810911!12227-129F4;0.719826!10508-107D4;0.590242!10539-107G8;0.437699!10607-108F4;0.603582!10555-107I6;0.921111!10774-110F9;0.180514!10637-108I7;0.864662!10663-109C6;0.559036!10728-110A8;0.193406!10729-110A9;0.750463!10430-106D7;0.735639!10730-110B1;0.469136!10813-111B3;0.86967!10812-111B2;0.979608!10037-101F1;0.269855!10172-103C1;0.65824!10163-103B1;0.519541!10076-102A4;0.687224!10073-102A1;0.620768!10036-101E9;0.857075!10195-103E6;0.530062!10277-104E7;0.583594!10434-106E2;0.750582!10550-107I1;0.450659!10545-107H5;0.475134!10544-107H4;0.668827!10704-109H2;0.808187!10510-107D6;0.591744!10558-107I9;0.475225!10020-101D2;0.406236!10732-110B3;0.471744!10049-101G4;0.834842!10698-109G5;0.927353!10437-106E5;0.756398!10417-106C3;0.90044!10035-101E8;0.484412!10171-103B9;0.615265!10157-103A4;0.583475!10034-101E7;0.678945!10072-101I9;0.564022!10199-103F1;0.836143!10200-103F2;0.330859!10697-109G4;0.795165!10723-110A3;0.881093!10179-103C8;0.601187!10160-103A7;0.970504!10180-103C9;0.709669!10162-103A9;0.638839!10021-101D3;0.891908!10840-111E3;0.790321!10706-109H4;0.766898!10033-101E6;0.939483!10032-101E5;0.595249!10490-107B4;0.588746!10439-106E7;0.928848!10022-101D4;0.937151!10176-103C5;0.409748!10469-106I1;0.626859!10067-101I4;0.868482!10411-106B6;0.623319!10471-106I3;0.848479!10030-101E3;0.645405!10475-106I7;0.90072!10787-110H4;0.645045!10477-106I9;0.79566!10695-109G2;0.99225!11771-123I7;0.704958!11772-123I8;0.11531!11773-123I9;0.425823!10093-102C3;0.437711!10442-106F1;0.293809!10442-106F1;0.597757!10201-103F3;0.476272!10639-108I9;0.366535!11843-124H7;0.869026!11841-124H5;0.845835!10693-109F9;0.633559!10436-106E4;0.73396!10483-107A6;0.999152!10282-104F3;0.357759!10023-101D5;0.841489!10066-101I3;0.861775!10065-101I2;0.518789!10800-110I8;0.599922!10610-108F7;0.931093!10841-111E4;0.290782!10541-107H1;0.789292!10842-111E5;0.82607!10562-108A4;0.92155!10024-101D6;0.560037!10064-101I1;0.528592!10609-108F6;0.732733!10048-101G3;0.448618!10781-110G7;0.457615!10181-103D1;0.719696!10159-103A6;0.705083!10056-101H2;0.487071!10737-110B8;0.865347!10025-101D7;0.721381!10044-101F8;0.438096!10424-106D1;0.24287!10463-106H4;0.589544!10616-108G4;0.251375!10486-107A9;0.67337!10062-101H8;0.854761!10202-103F4;0.562688!10158-103A5;0.441093!10441-106E9;0.549475!10031-101E4;0.689038!10063-101H9;0.552927!10063-101H9;0.734302!11763-123H8;0.659738!11765-123I1;0.900857!11768-123I4;0.417987!10807-111A6;0.737824!10790-110H7;0.58797!10798-110I6;0.930722!10786-110H3;0.99515!10591-108D6;0.805037!10593-108D8;0.902238!10590-108D5;0.456017!10026-101D8;0.801933!10096-102C6;0.760616!10168-103B6;0.835183!10154-103A1;0.446807!10209-103G2;0.490772!10061-101H7;0.633689!10027-101D9;0.320728!10043-101F7;0.223863!10783-110G9;0.221833!10028-101E1;0.520413!10060-101H6;0.494337!10203-103F5;0.236922!10059-101H5;0.607423!10047-101G2;0.572779!10029-101E2;0.386234!10058-101H4;0.470612!10418-106C4;0.626905!10492-107B6;0.384555!10694-109G1;0.810979!10797-110I5;0.800161!10057-101H3;0.0575942!10100-102D1;0.759669!10055-101H1;0.346404!10204-103F6;0.38168!10191-103E2;0.237821!10563-108A5;0.353955
|name=motif_TCNAGT
|name=motif_TCNAGT
|tomtom_result=tin#MA0247.1;1;0.00184889;0.880072;0.80922;6;TCAAGT;CTCAAGTG;+!vnd#MA0253.1;2;0.0020736;0.987031;0.80922;6;TCAAGT;TTTCAAGTG;+!ceh-22#MA0264.1;2;0.00255006;1.21383;0.80922;6;TCAAGT;TTTCAAGTGGT;-
}}
}}

Latest revision as of 13:35, 7 September 2012

Full Name: motif_TCNAGT

Motif matrix
POACGT
0100010432
0201043200
032608260826082608
0410432000
0500104320
0600010432

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
tin#MA0247.110.001848890.8800720.809226TCAAGTCTCAAGTG+
vnd#MA0253.120.00207360.9870310.809226TCAAGTTTTCAAGTG+
ceh-22#MA0264.120.002550061.213830.809226TCAAGTTTTCAAGTGGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TCNAGT&oldid=2134052"